RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 UCHL1P09936 223 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 FAM236CP0DP71 79 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 ZNF22P17026 224 aaPredicted RBP2.1□□□□□ -2.07
LIMA1-208ENST00000551691 RAB14P61106 215 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 IGFL1Q6UW32 110 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 C6orf201Q7Z4U5 140 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.1□□□□□ -2.07
LIMA1-208ENST00000551691 OR5D14Q8NGL3 314 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 OR4C16Q8NGL9 310 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 OR5C1Q8NGR4 320 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 OR13C6PQ8NH95 151 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 LINC00052Q96N35 136 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 PRRT1Q99946 306 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 ABRACLQ9P1F3 81 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 LY96Q9Y6Y9 160 aa2.1□□□□□ -2.07
LIMA1-208ENST00000551691 A0A1B0GU33 70 aa2.09□□□□□ -2.07
LIMA1-208ENST00000551691 DHFRP00374 187 aa2.09□□□□□ -2.07
LIMA1-208ENST00000551691 IFNA1P01562 189 aa2.09□□□□□ -2.07
LIMA1-208ENST00000551691 HMGN1P05114 100 aa2.09□□□□□ -2.07
LIMA1-208ENST00000551691 OR4E1P0C645 316 aa2.09□□□□□ -2.07
LIMA1-208ENST00000551691 HLA-DRB4P13762 266 aa2.09□□□□□ -2.07
LIMA1-208ENST00000551691 ZNF93P35789 620 aaPredicted RBP2.09□□□□□ -2.07
LIMA1-208ENST00000551691 RPS20P60866 119 aaKnown RBP2.09□□□□□ -2.07
LIMA1-208ENST00000551691 WT1-ASQ06250 92 aa2.09□□□□□ -2.07
LIMA1-208ENST00000551691 RTL8BQ17RB0 113 aa2.09□□□□□ -2.07
LIMA1-208ENST00000551691 WHAMMP3Q1A5X7 153 aa2.09□□□□□ -2.07
LIMA1-208ENST00000551691 RPL22L1Q6P5R6 122 aaKnown RBP2.09□□□□□ -2.07
LIMA1-208ENST00000551691 GLIPR1L1Q6UWM5 242 aa2.09□□□□□ -2.07
LIMA1-208ENST00000551691 SMIM15Q7Z3B0 74 aa2.09□□□□□ -2.07
LIMA1-208ENST00000551691 RNASE7Q9H1E1 156 aaKnown RBP2.09□□□□□ -2.07
LIMA1-208ENST00000551691 EFCAB1Q9HAE3 211 aa2.09□□□□□ -2.07
LIMA1-208ENST00000551691 XAGE1AQ9HD64 81 aa2.09□□□□□ -2.07
LIMA1-208ENST00000551691 FUT9Q9Y231 359 aa2.09□□□□□ -2.07
LIMA1-208ENST00000551691 TIMM9Q9Y5J7 89 aa2.09□□□□□ -2.07
LIMA1-208ENST00000551691 HLA-DRB4X5D2U9 266 aa2.09□□□□□ -2.07
LIMA1-208ENST00000551691 TRAV12-2A0A075B6T6 113 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 C19orf71A6NCJ1 209 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 G3V2T6 193 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 J3QLW9 94 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 M0R2Z0 102 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 PFDN1O60925 122 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 IGKV1-17P01599 117 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 RPSAP08865 295 aaKnown RBP2.08□□□□□ -2.08
LIMA1-208ENST00000551691 SMIM17P0DL12 118 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 HRES1P13985 223 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 EVI2AP22794 236 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 HIST1H2BOP23527 126 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 S100A4P26447 101 aaKnown RBP2.08□□□□□ -2.08
LIMA1-208ENST00000551691 HIST1H2BBP33778 126 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 HIST1H2BDP58876 126 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 B2MP61769 119 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 HIST1H4AP62805 103 aaKnown RBP2.08□□□□□ -2.08
LIMA1-208ENST00000551691 HIST1H2BCP62807 126 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 PSG9Q00887 426 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 HIST2H2BEQ16778 126 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.08□□□□□ -2.08
LIMA1-208ENST00000551691 AKR1C8PQ5T2L2 129 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 LYRM7Q5U5X0 104 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 TMEM167AQ8TBQ9 72 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 DNAJC9Q8WXX5 260 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 HIST1H2BHQ93079 126 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 S100A13Q99584 98 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 HIST1H2BNQ99877 126 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 HIST1H2BMQ99879 126 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 IL36BQ9NZH7 164 aa2.08□□□□□ -2.08
LIMA1-208ENST00000551691 A0A0G2JND7 137 aa2.07□□□□□ -2.08
LIMA1-208ENST00000551691 IRGMA1A4Y4 181 aa2.07□□□□□ -2.08
LIMA1-208ENST00000551691 FABP5P3A8MUU1 101 aa2.07□□□□□ -2.08
LIMA1-208ENST00000551691 I3L2K1 104 aa2.07□□□□□ -2.08
LIMA1-208ENST00000551691 NDUFC2O95298 119 aa2.07□□□□□ -2.08
LIMA1-208ENST00000551691 HTR1AP08908 422 aa2.07□□□□□ -2.08
LIMA1-208ENST00000551691 SULT1A3P0DMM9 295 aa2.07□□□□□ -2.08
LIMA1-208ENST00000551691 SULT1A4P0DMN0 295 aa2.07□□□□□ -2.08
LIMA1-208ENST00000551691 XCL1P47992 114 aa2.07□□□□□ -2.08
LIMA1-208ENST00000551691 EIF2B2P49770 351 aaKnown RBP2.07□□□□□ -2.08
LIMA1-208ENST00000551691 GTF2A1P52655 376 aaPredicted RBP2.07□□□□□ -2.08
LIMA1-208ENST00000551691 MEF2BQ02080 365 aaPredicted RBP2.07□□□□□ -2.08
LIMA1-208ENST00000551691 MIAQ16674 131 aa2.07□□□□□ -2.08
LIMA1-208ENST00000551691 SPINK13Q1W4C9 94 aa2.07□□□□□ -2.08
LIMA1-208ENST00000551691 FAM229BQ4G0N7 80 aa2.07□□□□□ -2.08
LIMA1-208ENST00000551691 GOLT1AQ6ZVE7 132 aa2.07□□□□□ -2.08
LIMA1-208ENST00000551691 OR10D4PQ8NGN7 298 aa2.07□□□□□ -2.08
LIMA1-208ENST00000551691 TOMM6Q96B49 74 aa2.07□□□□□ -2.08
LIMA1-208ENST00000551691 DNAJC30Q96LL9 226 aa2.07□□□□□ -2.08
LIMA1-208ENST00000551691 LINC00467Q9BRT7 94 aa2.07□□□□□ -2.08
LIMA1-208ENST00000551691 GINS4Q9BRT9 223 aa2.07□□□□□ -2.08
LIMA1-208ENST00000551691 PBDC1Q9BVG4 233 aa2.07□□□□□ -2.08
LIMA1-208ENST00000551691 TTTY13Q9BZ97 58 aa2.07□□□□□ -2.08
LIMA1-208ENST00000551691 MRPL36Q9P0J6 103 aaKnown RBP2.07□□□□□ -2.08
LIMA1-208ENST00000551691 NAT8Q9UHE5 227 aa2.07□□□□□ -2.08
LIMA1-208ENST00000551691 TIMM8BQ9Y5J9 83 aaPredicted RBP2.07□□□□□ -2.08
LIMA1-208ENST00000551691 A0A0J9YX75 114 aa2.06□□□□□ -2.08
LIMA1-208ENST00000551691 A0A1B0GV72 72 aa2.06□□□□□ -2.08
LIMA1-208ENST00000551691 IBA57-AS1B1ANH7 110 aa2.06□□□□□ -2.08
LIMA1-208ENST00000551691 G3V3Q6 166 aa2.06□□□□□ -2.08
LIMA1-208ENST00000551691 H3BNG1 76 aa2.06□□□□□ -2.08
LIMA1-208ENST00000551691 LEPROTO15243 131 aa2.06□□□□□ -2.08
LIMA1-208ENST00000551691 IGHV3-30P01768 117 aa2.06□□□□□ -2.08
LIMA1-208ENST00000551691 IGHV3-33P01772 117 aa2.06□□□□□ -2.08
LIMA1-208ENST00000551691 IGHV3-30-5P0DP03 117 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms