RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 OR2D3Q8NGH3 330 aa9.3□□□□□ -0.92
TMEM106C-216ENST00000551305 LYPD6BQ8NI32 183 aa9.3□□□□□ -0.92
TMEM106C-216ENST00000551305 LINC01600Q96MT4 127 aa9.3□□□□□ -0.92
TMEM106C-216ENST00000551305 AMTP48728 403 aa9.29□□□□□ -0.92
TMEM106C-216ENST00000551305 CACNG7P62955 275 aa9.29□□□□□ -0.92
TMEM106C-216ENST00000551305 CCL20P78556 96 aa9.29□□□□□ -0.92
TMEM106C-216ENST00000551305 WDR73Q6P4I2 378 aa9.29□□□□□ -0.92
TMEM106C-216ENST00000551305 NIT2Q9NQR4 276 aa9.29□□□□□ -0.92
TMEM106C-216ENST00000551305 RAB19A4D1S5 217 aa9.28□□□□□ -0.92
TMEM106C-216ENST00000551305 C19orf71A6NCJ1 209 aa9.28□□□□□ -0.92
TMEM106C-216ENST00000551305 UMAD1C9J7I0 102 aa9.28□□□□□ -0.92
TMEM106C-216ENST00000551305 H2AFB1P0C5Y9 115 aa9.28□□□□□ -0.92
TMEM106C-216ENST00000551305 RPS10P46783 165 aaKnown RBP9.28□□□□□ -0.92
TMEM106C-216ENST00000551305 RPS20P60866 119 aaKnown RBP9.28□□□□□ -0.92
TMEM106C-216ENST00000551305 PRR3P79522 188 aaKnown RBP9.28□□□□□ -0.92
TMEM106C-216ENST00000551305 CENPWQ5EE01 88 aa9.28□□□□□ -0.92
TMEM106C-216ENST00000551305 PGLYRP4Q96LB8 373 aa9.28□□□□□ -0.92
TMEM106C-216ENST00000551305 LCE2BO14633 110 aa9.27□□□□□ -0.93
TMEM106C-216ENST00000551305 NDUFS6O75380 124 aaKnown RBP9.27□□□□□ -0.93
TMEM106C-216ENST00000551305 COTL1Q14019 142 aa9.27□□□□□ -0.93
TMEM106C-216ENST00000551305 CFAP161Q6P656 301 aa9.27□□□□□ -0.93
TMEM106C-216ENST00000551305 LYZL1Q6UWQ5 148 aa9.27□□□□□ -0.93
TMEM106C-216ENST00000551305 STPG4Q8N801 248 aa9.27□□□□□ -0.93
TMEM106C-216ENST00000551305 NTF3P20783 257 aa9.26□□□□□ -0.93
TMEM106C-216ENST00000551305 C11orf52Q96A22 123 aa9.26□□□□□ -0.93
TMEM106C-216ENST00000551305 GNG13Q9P2W3 67 aa9.26□□□□□ -0.93
TMEM106C-216ENST00000551305 TRGC1P0CF51 173 aa9.25□□□□□ -0.93
TMEM106C-216ENST00000551305 CHCHD10Q8WYQ3 142 aaPredicted RBP9.25□□□□□ -0.93
TMEM106C-216ENST00000551305 A0A096LNI7 61 aa9.24□□□□□ -0.93
TMEM106C-216ENST00000551305 TRAV26-2A0A0B4J265 109 aa9.24□□□□□ -0.93
TMEM106C-216ENST00000551305 F2Z2F3 143 aa9.24□□□□□ -0.93
TMEM106C-216ENST00000551305 ZNF345Q14585 488 aa9.24□□□□□ -0.93
TMEM106C-216ENST00000551305 A0A0J9YXV3 536 aa9.24□□□□□ -0.93
TMEM106C-216ENST00000551305 IFNA1P01562 189 aa9.24□□□□□ -0.93
TMEM106C-216ENST00000551305 KRTAP10-8P60410 259 aa9.24□□□□□ -0.93
TMEM106C-216ENST00000551305 Q6ZNX1 250 aa9.24□□□□□ -0.93
TMEM106C-216ENST00000551305 GATD1Q8NB37 220 aa9.24□□□□□ -0.93
TMEM106C-216ENST00000551305 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.23□□□□□ -0.93
TMEM106C-216ENST00000551305 IGKV2-29A2NJV5 120 aaPredicted RBP9.23□□□□□ -0.93
TMEM106C-216ENST00000551305 BCL2L11O43521 198 aa9.23□□□□□ -0.93
TMEM106C-216ENST00000551305 GNG4P50150 75 aa9.23□□□□□ -0.93
TMEM106C-216ENST00000551305 RNASEKQ6P5S7 137 aaKnown RBP9.23□□□□□ -0.93
TMEM106C-216ENST00000551305 LINC00526Q96FQ7 95 aa9.23□□□□□ -0.93
TMEM106C-216ENST00000551305 MANBALQ9NQG1 85 aa9.23□□□□□ -0.93
TMEM106C-216ENST00000551305 GVQW2A0A096LPI5 108 aaPredicted RBP9.22□□□□□ -0.93
TMEM106C-216ENST00000551305 KANTRA0A1W2PQU2 76 aa9.22□□□□□ -0.93
TMEM106C-216ENST00000551305 XKRY2A2RUG3 117 aa9.22□□□□□ -0.93
TMEM106C-216ENST00000551305 FOXI1Q12951 378 aa9.22□□□□□ -0.93
TMEM106C-216ENST00000551305 TWIST1Q15672 202 aa9.22□□□□□ -0.93
TMEM106C-216ENST00000551305 AMMECR1LQ6DCA0 310 aa9.22□□□□□ -0.93
TMEM106C-216ENST00000551305 C9orf62Q8N4C0 152 aa9.22□□□□□ -0.93
TMEM106C-216ENST00000551305 RPL39LQ96EH5 51 aaKnown RBP9.22□□□□□ -0.93
TMEM106C-216ENST00000551305 TRBV20OR9-2A0A075B6H5 130 aa9.21□□□□□ -0.94
TMEM106C-216ENST00000551305 SPINK6Q6UWN8 80 aa9.21□□□□□ -0.94
TMEM106C-216ENST00000551305 NUDT10Q8NFP7 164 aa9.21□□□□□ -0.94
TMEM106C-216ENST00000551305 NUDT11Q96G61 164 aa9.21□□□□□ -0.94
TMEM106C-216ENST00000551305 HMSDA8MTL9 139 aa9.2□□□□□ -0.94
TMEM106C-216ENST00000551305 FGF6P10767 208 aa9.2□□□□□ -0.94
TMEM106C-216ENST00000551305 CTRLP40313 264 aa9.2□□□□□ -0.94
TMEM106C-216ENST00000551305 FOXA3P55318 350 aaPredicted RBP9.2□□□□□ -0.94
TMEM106C-216ENST00000551305 BATF3Q9NR55 127 aa9.2□□□□□ -0.94
TMEM106C-216ENST00000551305 XCL1P47992 114 aa9.19□□□□□ -0.94
TMEM106C-216ENST00000551305 SRSF9Q13242 221 aaKnown RBP eCLIP9.19□□□□□ -0.94
TMEM106C-216ENST00000551305 SMIM12Q96EX1 92 aa9.19□□□□□ -0.94
TMEM106C-216ENST00000551305 MED9Q9NWA0 146 aa9.19□□□□□ -0.94
TMEM106C-216ENST00000551305 TRAV1-1A0A0B4J248 108 aa9.18□□□□□ -0.94
TMEM106C-216ENST00000551305 RGS21Q2M5E4 152 aa9.18□□□□□ -0.94
TMEM106C-216ENST00000551305 REG3GQ6UW15 175 aa9.18□□□□□ -0.94
TMEM106C-216ENST00000551305 NCR2O95944 276 aa9.17□□□□□ -0.94
TMEM106C-216ENST00000551305 APCSP02743 223 aa9.17□□□□□ -0.94
TMEM106C-216ENST00000551305 EIF5AP63241 154 aaKnown RBP9.17□□□□□ -0.94
TMEM106C-216ENST00000551305 MEF2BQ02080 365 aaPredicted RBP9.17□□□□□ -0.94
TMEM106C-216ENST00000551305 OR5A1Q8NGJ0 315 aa9.17□□□□□ -0.94
TMEM106C-216ENST00000551305 CNFNQ9BYD5 112 aa9.17□□□□□ -0.94
TMEM106C-216ENST00000551305 RNASE7Q9H1E1 156 aaKnown RBP9.17□□□□□ -0.94
TMEM106C-216ENST00000551305 LINC00959A0A1B0GUT2 108 aa9.16□□□□□ -0.94
TMEM106C-216ENST00000551305 FAM231BA6NCW3 169 aa9.16□□□□□ -0.94
TMEM106C-216ENST00000551305 H7C423 109 aa9.16□□□□□ -0.94
TMEM106C-216ENST00000551305 CCL25O15444 150 aa9.16□□□□□ -0.94
TMEM106C-216ENST00000551305 BIN3Q9NQY0 253 aa9.16□□□□□ -0.94
TMEM106C-216ENST00000551305 LINC00474Q9P2X8 69 aa9.16□□□□□ -0.94
TMEM106C-216ENST00000551305 IGHV1-58A0A0C4DH39 117 aa9.15□□□□□ -0.94
TMEM106C-216ENST00000551305 SDHAF1A6NFY7 115 aa9.15□□□□□ -0.94
TMEM106C-216ENST00000551305 PDE6DO43924 150 aa9.15□□□□□ -0.94
TMEM106C-216ENST00000551305 Q6ZRP5 223 aa9.15□□□□□ -0.94
TMEM106C-216ENST00000551305 CARD19Q96LW7 228 aa9.15□□□□□ -0.94
TMEM106C-216ENST00000551305 RPP21Q9H633 154 aaKnown RBP9.15□□□□□ -0.94
TMEM106C-216ENST00000551305 K7EN84 100 aa9.14□□□□□ -0.95
TMEM106C-216ENST00000551305 GAS8-AS1O95177 125 aa9.14□□□□□ -0.95
TMEM106C-216ENST00000551305 PMCHP20382 165 aa9.13□□□□□ -0.95
TMEM106C-216ENST00000551305 OCC1Q8TAD7 63 aa9.13□□□□□ -0.95
TMEM106C-216ENST00000551305 TMEM101Q96IK0 257 aa9.13□□□□□ -0.95
TMEM106C-216ENST00000551305 TEX46H3BTG2 121 aa9.12□□□□□ -0.95
TMEM106C-216ENST00000551305 I3L3M4 83 aa9.12□□□□□ -0.95
TMEM106C-216ENST00000551305 BCL2P10415 239 aa9.12□□□□□ -0.95
TMEM106C-216ENST00000551305 ZNF25P17030 456 aaPredicted RBP9.12□□□□□ -0.95
TMEM106C-216ENST00000551305 SYCNQ0VAF6 134 aa9.12□□□□□ -0.95
TMEM106C-216ENST00000551305 GAGE2BQ13066 116 aa9.12□□□□□ -0.95
TMEM106C-216ENST00000551305 BTF3L4Q96K17 158 aa9.12□□□□□ -0.95
TMEM106C-216ENST00000551305 A0A1W2PNN7 141 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 172.2 ms