RNA–Protein interactions for RNA: ENST00000551293.1

RPAP3-207, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best)

Gene RPAP3, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-207ENST00000551293 MLST8Q9BVC4 326 aa11.48□□□□□ -0.57
RPAP3-207ENST00000551293 RASL11AQ6T310 242 aa11.47□□□□□ -0.57
RPAP3-207ENST00000551293 Q6ZRP5 223 aa11.47□□□□□ -0.57
RPAP3-207ENST00000551293 TCEAL7Q9BRU2 100 aa11.47□□□□□ -0.57
RPAP3-207ENST00000551293 GVQW2A0A096LPI5 108 aaPredicted RBP11.46□□□□□ -0.57
RPAP3-207ENST00000551293 MED28Q9H204 178 aa11.46□□□□□ -0.57
RPAP3-207ENST00000551293 MUC2Q02817 5179 aa11.45□□□□□ -0.58
RPAP3-207ENST00000551293 COTL1Q14019 142 aa11.45□□□□□ -0.58
RPAP3-207ENST00000551293 S100A9P06702 114 aaKnown RBP11.44□□□□□ -0.58
RPAP3-207ENST00000551293 FER1L6-AS1Q8NA97 138 aa11.44□□□□□ -0.58
RPAP3-207ENST00000551293 PGLYRP4Q96LB8 373 aa11.44□□□□□ -0.58
RPAP3-207ENST00000551293 RNASEKQ6P5S7 137 aaKnown RBP11.43□□□□□ -0.58
RPAP3-207ENST00000551293 NIT2Q9NQR4 276 aa11.43□□□□□ -0.58
RPAP3-207ENST00000551293 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.42□□□□□ -0.58
RPAP3-207ENST00000551293 IGKV2-29A2NJV5 120 aaPredicted RBP11.42□□□□□ -0.58
RPAP3-207ENST00000551293 IGLC6P0CF74 106 aa11.42□□□□□ -0.58
RPAP3-207ENST00000551293 FOXI1Q12951 378 aa11.42□□□□□ -0.58
RPAP3-207ENST00000551293 AMMECR1LQ6DCA0 310 aa11.42□□□□□ -0.58
RPAP3-207ENST00000551293 TMUB2Q71RG4 321 aa11.42□□□□□ -0.58
RPAP3-207ENST00000551293 SFT2D1Q8WV19 159 aa11.42□□□□□ -0.58
RPAP3-207ENST00000551293 KRTAP9-2Q9BYQ4 174 aa11.42□□□□□ -0.58
RPAP3-207ENST00000551293 PFDN1O60925 122 aa11.41□□□□□ -0.58
RPAP3-207ENST00000551293 XCL1P47992 114 aa11.41□□□□□ -0.58
RPAP3-207ENST00000551293 OR2D3Q8NGH3 330 aa11.41□□□□□ -0.58
RPAP3-207ENST00000551293 CYTL1Q9NRR1 136 aa11.41□□□□□ -0.58
RPAP3-207ENST00000551293 LINC00474Q9P2X8 69 aa11.41□□□□□ -0.58
RPAP3-207ENST00000551293 FAM231BA6NCW3 169 aa11.4□□□□□ -0.58
RPAP3-207ENST00000551293 CARD19Q96LW7 228 aa11.4□□□□□ -0.58
RPAP3-207ENST00000551293 TRAV26-2A0A0B4J265 109 aa11.39□□□□□ -0.59
RPAP3-207ENST00000551293 GIPP09681 153 aaPredicted RBP11.39□□□□□ -0.59
RPAP3-207ENST00000551293 RPL35P42766 123 aaKnown RBP11.39□□□□□ -0.59
RPAP3-207ENST00000551293 CACNG7P62955 275 aa11.39□□□□□ -0.59
RPAP3-207ENST00000551293 GAGE2BQ13066 116 aa11.39□□□□□ -0.59
RPAP3-207ENST00000551293 Q6ZNX1 250 aa11.39□□□□□ -0.59
RPAP3-207ENST00000551293 FAM213BQ8TBF2 198 aa11.39□□□□□ -0.59
RPAP3-207ENST00000551293 A0A1W2PNN7 141 aa11.37□□□□□ -0.59
RPAP3-207ENST00000551293 LYZL1Q6UWQ5 148 aa11.37□□□□□ -0.59
RPAP3-207ENST00000551293 PRR26Q8N8Z3 221 aa11.37□□□□□ -0.59
RPAP3-207ENST00000551293 CCL25O15444 150 aa11.36□□□□□ -0.59
RPAP3-207ENST00000551293 ARPC5O15511 151 aa11.36□□□□□ -0.59
RPAP3-207ENST00000551293 FGF6P10767 208 aa11.36□□□□□ -0.59
RPAP3-207ENST00000551293 NTF3P20783 257 aa11.36□□□□□ -0.59
RPAP3-207ENST00000551293 KCNRGQ8N5I3 272 aa11.36□□□□□ -0.59
RPAP3-207ENST00000551293 PSORS1C2Q9UIG4 136 aa11.36□□□□□ -0.59
RPAP3-207ENST00000551293 TRGC1P0CF51 173 aa11.35□□□□□ -0.59
RPAP3-207ENST00000551293 PTTG1IPP53801 180 aa11.35□□□□□ -0.59
RPAP3-207ENST00000551293 SYCNQ0VAF6 134 aa11.35□□□□□ -0.59
RPAP3-207ENST00000551293 CENPWQ5EE01 88 aa11.35□□□□□ -0.59
RPAP3-207ENST00000551293 GATD1Q8NB37 220 aa11.35□□□□□ -0.59
RPAP3-207ENST00000551293 RPL39LQ96EH5 51 aaKnown RBP11.35□□□□□ -0.59
RPAP3-207ENST00000551293 IGHV1-58A0A0C4DH39 117 aa11.34□□□□□ -0.59
RPAP3-207ENST00000551293 MT-ND6P03923 174 aa11.34□□□□□ -0.59
RPAP3-207ENST00000551293 RPS20P60866 119 aaKnown RBP11.34□□□□□ -0.59
RPAP3-207ENST00000551293 MBD3L1Q8WWY6 194 aa11.34□□□□□ -0.59
RPAP3-207ENST00000551293 RAB19A4D1S5 217 aa11.33□□□□□ -0.6
RPAP3-207ENST00000551293 G3V3Q6 166 aa11.33□□□□□ -0.6
RPAP3-207ENST00000551293 C1orf137Q5JT78 98 aa11.33□□□□□ -0.6
RPAP3-207ENST00000551293 LINC00959A0A1B0GUT2 108 aa11.32□□□□□ -0.6
RPAP3-207ENST00000551293 ZNF561-AS1K7EIQ3 104 aa11.32□□□□□ -0.6
RPAP3-207ENST00000551293 IFNA1P01562 189 aa11.32□□□□□ -0.6
RPAP3-207ENST00000551293 APCSP02743 223 aa11.32□□□□□ -0.6
RPAP3-207ENST00000551293 BCL2P10415 239 aa11.32□□□□□ -0.6
RPAP3-207ENST00000551293 TWIST1Q15672 202 aa11.32□□□□□ -0.6
RPAP3-207ENST00000551293 ZNF664Q8N3J9 261 aa11.32□□□□□ -0.6
RPAP3-207ENST00000551293 OR5A1Q8NGJ0 315 aa11.32□□□□□ -0.6
RPAP3-207ENST00000551293 PKIGQ9Y2B9 76 aa11.32□□□□□ -0.6
RPAP3-207ENST00000551293 C19orf71A6NCJ1 209 aa11.31□□□□□ -0.6
RPAP3-207ENST00000551293 F2Z2F3 143 aa11.31□□□□□ -0.6
RPAP3-207ENST00000551293 PHF5AQ7RTV0 110 aaKnown RBP11.31□□□□□ -0.6
RPAP3-207ENST00000551293 SMLR1H3BR10 107 aa11.3□□□□□ -0.6
RPAP3-207ENST00000551293 IGLV4-69A0A075B6H9 119 aa11.29□□□□□ -0.6
RPAP3-207ENST00000551293 LOC107984640A0A0U1RRK4 108 aa11.29□□□□□ -0.6
RPAP3-207ENST00000551293 CAMPP49913 170 aa11.29□□□□□ -0.6
RPAP3-207ENST00000551293 FOXA3P55318 350 aaPredicted RBP11.29□□□□□ -0.6
RPAP3-207ENST00000551293 CCL20P78556 96 aa11.29□□□□□ -0.6
RPAP3-207ENST00000551293 PRR4Q16378 134 aa11.29□□□□□ -0.6
RPAP3-207ENST00000551293 C9orf116Q5BN46 136 aaPredicted RBP11.29□□□□□ -0.6
RPAP3-207ENST00000551293 GNG13Q9P2W3 67 aa11.29□□□□□ -0.6
RPAP3-207ENST00000551293 XKRY2A2RUG3 117 aa11.28□□□□□ -0.6
RPAP3-207ENST00000551293 H2AFB1P0C5Y9 115 aa11.28□□□□□ -0.6
RPAP3-207ENST00000551293 TMEM101Q96IK0 257 aa11.28□□□□□ -0.6
RPAP3-207ENST00000551293 BTF3L4Q96K17 158 aa11.28□□□□□ -0.6
RPAP3-207ENST00000551293 NCR2O95944 276 aa11.27□□□□□ -0.61
RPAP3-207ENST00000551293 GNG4P50150 75 aa11.27□□□□□ -0.61
RPAP3-207ENST00000551293 C11orf52Q96A22 123 aa11.27□□□□□ -0.61
RPAP3-207ENST00000551293 SDHAF1A6NFY7 115 aa11.26□□□□□ -0.61
RPAP3-207ENST00000551293 H7C423 109 aa11.26□□□□□ -0.61
RPAP3-207ENST00000551293 RPL18AQ02543 176 aaKnown RBP11.26□□□□□ -0.61
RPAP3-207ENST00000551293 SS18Q15532 418 aa11.26□□□□□ -0.61
RPAP3-207ENST00000551293 C9orf62Q8N4C0 152 aa11.26□□□□□ -0.61
RPAP3-207ENST00000551293 UMAD1C9J7I0 102 aa11.25□□□□□ -0.61
RPAP3-207ENST00000551293 PMCHP20382 165 aa11.25□□□□□ -0.61
RPAP3-207ENST00000551293 CTRLP40313 264 aa11.25□□□□□ -0.61
RPAP3-207ENST00000551293 OPRPNQ99935 248 aaPredicted RBP11.25□□□□□ -0.61
RPAP3-207ENST00000551293 FAT4Q6V0I7 4981 aa11.24□□□□□ -0.61
RPAP3-207ENST00000551293 ZNF25P17030 456 aaPredicted RBP11.24□□□□□ -0.61
RPAP3-207ENST00000551293 CD164L2Q6UWJ8 174 aa11.24□□□□□ -0.61
RPAP3-207ENST00000551293 CAMK2N2Q96S95 79 aa11.24□□□□□ -0.61
RPAP3-207ENST00000551293 TRBV20OR9-2A0A075B6H5 130 aa11.23□□□□□ -0.61
RPAP3-207ENST00000551293 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms