RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 NDUFA12Q9UI09 145 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 KDM3BQ7LBC6 1761 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 MED12Q93074 2177 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 MROH1Q8NDA8 1641 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 UNC13BO14795 1591 aa1.25□□□□□ -2.21
TSPAN8-205ENST00000550818 MLH3Q9UHC1 1453 aa1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 SPAG17Q6Q759 2223 aa1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 RGPD1P0DJD0 1748 aa1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 CLTCQ00610 1675 aaKnown RBP1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 A0A087WWC5 75 aa1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 KANTRA0A1W2PQU2 76 aa1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 SYS1-DBNDD2H3BUS1 97 aa1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 IGHV3-33P01772 117 aa1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 UBE2G1P62253 170 aa1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 KLKP1Q107X0 134 aa1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 MPV17LQ2QL34 196 aa1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 NMSQ5H8A3 153 aa1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 SLC48A1Q6P1K1 146 aa1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 UNQ6190/PRO20217Q6UXQ8 127 aa1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 CASC2Q6XLA1 102 aa1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 C18orf32Q8TCD1 76 aa1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 AMELYQ99218 206 aa1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 CDC42SE1Q9NRR8 79 aa1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 C22orf24Q9Y442 160 aa1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 SPCS1Q9Y6A9 102 aa1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 TARBP1Q13395 1621 aaKnown RBP1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 DOCK2Q92608 1830 aa1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 PTPRMP28827 1452 aa1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 CDK12Q9NYV4 1490 aaPredicted RBP1.24□□□□□ -2.21
TSPAN8-205ENST00000550818 HELZ2Q9BYK8 2649 aaKnown RBP1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 COL4A6Q14031 1691 aa1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 MYO3AQ8NEV4 1616 aa1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 TRBV7-1A0A0A6YYK4 115 aa1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 TRAV13-2A0A0B4J235 113 aa1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 TRBV10-3A0A0K0K1G6 114 aa1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 CXorf51AA0A1B0GTR3 108 aa1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 H7BZZ5 65 aa1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 ERC2-IT1O76042 136 aa1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 SIX6O95475 246 aa1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 ACYP1P07311 99 aa1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 FAUP35544 74 aaKnown RBP1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 PI4KAP42356 2102 aa1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 SNRPFP62306 86 aaKnown RBP1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 PMCHL1Q16048 86 aa1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 ETDBQ3ZM63 59 aa1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 C10orf55Q5SWW7 151 aa1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 LYPD5Q6UWN5 251 aa1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 TMEM254Q8TBM7 123 aa1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 FAM167A-AS1Q96KT0 104 aa1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 EFCAB5A4FU69 1503 aa1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 MUC22E2RYF6 1773 aaPredicted RBP1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 FANCD2Q9BXW9 1451 aa1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 ARFGEF3Q5TH69 2177 aa1.23□□□□□ -2.21
TSPAN8-205ENST00000550818 MGAMO43451 1857 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 IQGAP3Q86VI3 1631 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 MAP2P11137 1827 aaKnown RBP1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 DUOX2Q9NRD8 1548 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 IGKV3-7A0A075B6H7 116 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 IGKV2-40A0A087WW87 121 aaPredicted RBP1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 TRAV10A0A0B4J240 114 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 TRAV12-1A0A0B4J245 112 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 A6NIN4 97 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 F2Z2F3 143 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 C5orf67F2Z3F1 127 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 IGKV2D-40P01614 121 aaPredicted RBP1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 UBE2D3P61077 147 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 CNBPP62633 177 aaKnown RBP1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 UBE2D2P62837 147 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 RBM3P98179 157 aaKnown RBP1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 MIR22HGQ0VDD5 57 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 PDE6HQ13956 83 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 WFDC2Q14508 124 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 C2orf82Q6UX34 121 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 ZNF818PQ6ZRF7 136 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 ZNF833PQ6ZTB9 187 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 VMO1Q7Z5L0 202 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 ODF3Q96PU9 254 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 LINC00474Q9P2X8 69 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 UBR1Q8IWV7 1749 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 NWD2Q9ULI1 1742 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 GOLGA3Q08378 1498 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 KIF1AQ12756 1690 aa1.22□□□□□ -2.21
TSPAN8-205ENST00000550818 MYO7AQ13402 2215 aa1.21□□□□□ -2.21
TSPAN8-205ENST00000550818 TIAM1Q13009 1591 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 DIP2CQ9Y2E4 1556 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 ARFGEF2Q9Y6D5 1785 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 INTS1Q8N201 2190 aaKnown RBP1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 ESPL1Q14674 2120 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 ZNF142P52746 1687 aaPredicted RBP1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 C1orf167Q5SNV9 1468 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 TRBV7-3A0A075B6L6 115 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 LOC107984156A0A0G2JMH3 177 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 C2orf70A6NJV1 201 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 HCG22E2RYF7 251 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 SMIM11AP58511 58 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 GNG11P61952 73 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 GNGT1P63211 74 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 DEFB121Q5J5C9 76 aa1.21□□□□□ -2.22
TSPAN8-205ENST00000550818 CFAP126Q5VTH2 177 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms