RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 ZMAT4Q9H898 229 aa8.94□□□□□ -0.98
CACNB3-217ENST00000550483 TRAV9-2A0A087WT02 112 aa8.93□□□□□ -0.98
CACNB3-217ENST00000550483 CRYBA4P53673 196 aa8.93□□□□□ -0.98
CACNB3-217ENST00000550483 Q6ZSN1 163 aa8.93□□□□□ -0.98
CACNB3-217ENST00000550483 SLC25A29Q8N8R3 303 aa8.93□□□□□ -0.98
CACNB3-217ENST00000550483 C20orf203Q8NBC4 194 aa8.93□□□□□ -0.98
CACNB3-217ENST00000550483 C11orf68Q9H3H3 251 aaKnown RBP8.93□□□□□ -0.98
CACNB3-217ENST00000550483 PYGO1Q9Y3Y4 419 aa8.93□□□□□ -0.98
CACNB3-217ENST00000550483 NOTCH3Q9UM47 2321 aa8.92□□□□□ -0.98
CACNB3-217ENST00000550483 DEFB130BP0DP73 79 aa8.92□□□□□ -0.98
CACNB3-217ENST00000550483 DEFB130AP0DP74 79 aa8.92□□□□□ -0.98
CACNB3-217ENST00000550483 UBE2D3P61077 147 aa8.92□□□□□ -0.98
CACNB3-217ENST00000550483 DAD1P61803 113 aa8.92□□□□□ -0.98
CACNB3-217ENST00000550483 UBE2D2P62837 147 aa8.92□□□□□ -0.98
CACNB3-217ENST00000550483 FHL2Q14192 279 aa8.92□□□□□ -0.98
CACNB3-217ENST00000550483 NEGR1Q7Z3B1 354 aa8.92□□□□□ -0.98
CACNB3-217ENST00000550483 ZNRF2Q8NHG8 242 aa8.92□□□□□ -0.98
CACNB3-217ENST00000550483 GTSF1LQ9H1H1 148 aa8.92□□□□□ -0.98
CACNB3-217ENST00000550483 PRO0255Q9UI72 69 aa8.92□□□□□ -0.98
CACNB3-217ENST00000550483 ATP5G1P05496 136 aa8.91□□□□□ -0.98
CACNB3-217ENST00000550483 P0DMU3 169 aa8.91□□□□□ -0.98
CACNB3-217ENST00000550483 FAM231AP0DMU4 169 aa8.91□□□□□ -0.98
CACNB3-217ENST00000550483 FAM231CP0DMU5 169 aa8.91□□□□□ -0.98
CACNB3-217ENST00000550483 PLNP26678 52 aa8.91□□□□□ -0.98
CACNB3-217ENST00000550483 SPANXA1Q9NS26 97 aa8.91□□□□□ -0.98
CACNB3-217ENST00000550483 COL7A1Q02388 2944 aa8.91□□□□□ -0.98
CACNB3-217ENST00000550483 A0A087WX48 190 aa8.9□□□□□ -0.98
CACNB3-217ENST00000550483 IGIPA6NJ69 53 aa8.9□□□□□ -0.98
CACNB3-217ENST00000550483 H0Y8G0 127 aa8.9□□□□□ -0.98
CACNB3-217ENST00000550483 H7C423 109 aa8.9□□□□□ -0.98
CACNB3-217ENST00000550483 CDPF1Q6NVV7 123 aa8.9□□□□□ -0.98
CACNB3-217ENST00000550483 SPATA25Q9BR10 227 aa8.9□□□□□ -0.98
CACNB3-217ENST00000550483 TIMM21Q9BVV7 248 aa8.9□□□□□ -0.98
CACNB3-217ENST00000550483 HHLA3Q9XRX5 114 aa8.9□□□□□ -0.98
CACNB3-217ENST00000550483 PRB2P02812 416 aaPredicted RBP8.89□□□□□ -0.99
CACNB3-217ENST00000550483 ODF1Q14990 250 aa8.89□□□□□ -0.99
CACNB3-217ENST00000550483 SH2D6Q7Z4S9 175 aa8.89□□□□□ -0.99
CACNB3-217ENST00000550483 ZNF664Q8N3J9 261 aa8.89□□□□□ -0.99
CACNB3-217ENST00000550483 GAGE12JA6NER3 117 aa8.88□□□□□ -0.99
CACNB3-217ENST00000550483 F8VRH5 84 aa8.88□□□□□ -0.99
CACNB3-217ENST00000550483 DPM2O94777 84 aa8.88□□□□□ -0.99
CACNB3-217ENST00000550483 LINC00694P0DN24 101 aa8.88□□□□□ -0.99
CACNB3-217ENST00000550483 GAGE1Q13065 139 aa8.88□□□□□ -0.99
CACNB3-217ENST00000550483 GAGE4Q13068 117 aa8.88□□□□□ -0.99
CACNB3-217ENST00000550483 GAGE5Q13069 117 aa8.88□□□□□ -0.99
CACNB3-217ENST00000550483 PMVKQ15126 192 aa8.88□□□□□ -0.99
CACNB3-217ENST00000550483 GAGE13Q4V321 117 aa8.88□□□□□ -0.99
CACNB3-217ENST00000550483 SPATA45Q537H7 98 aa8.88□□□□□ -0.99
CACNB3-217ENST00000550483 PAM16Q9Y3D7 125 aa8.88□□□□□ -0.99
CACNB3-217ENST00000550483 DNAH3Q8TD57 4116 aa8.87□□□□□ -0.99
CACNB3-217ENST00000550483 TRAV26-1A0A087WT03 109 aa8.87□□□□□ -0.99
CACNB3-217ENST00000550483 IGKCP01834 107 aa8.87□□□□□ -0.99
CACNB3-217ENST00000550483 BAALCQ8WXS3 180 aa8.87□□□□□ -0.99
CACNB3-217ENST00000550483 CHCHD7Q9BUK0 85 aa8.87□□□□□ -0.99
CACNB3-217ENST00000550483 CHTOPQ9Y3Y2 248 aaKnown RBP8.87□□□□□ -0.99
CACNB3-217ENST00000550483 CSDC2Q9Y534 153 aaKnown RBP8.87□□□□□ -0.99
CACNB3-217ENST00000550483 NACAE9PAV3 2078 aa8.86□□□□□ -0.99
CACNB3-217ENST00000550483 TRBV25-1A0A075B6N4 114 aa8.86□□□□□ -0.99
CACNB3-217ENST00000550483 PAX4O43316 350 aa8.86□□□□□ -0.99
CACNB3-217ENST00000550483 MRPS36P82909 103 aaKnown RBP8.86□□□□□ -0.99
CACNB3-217ENST00000550483 PHLDA1Q8WV24 401 aaPredicted RBP8.86□□□□□ -0.99
CACNB3-217ENST00000550483 H3BNG1 76 aa8.85□□□□□ -0.99
CACNB3-217ENST00000550483 ZNF25P17030 456 aaPredicted RBP8.85□□□□□ -0.99
CACNB3-217ENST00000550483 RPL39P62891 51 aaKnown RBP8.85□□□□□ -0.99
CACNB3-217ENST00000550483 MRPL52Q86TS9 123 aaKnown RBP8.85□□□□□ -0.99
CACNB3-217ENST00000550483 PMCHL2Q9BQD1 86 aa8.85□□□□□ -0.99
CACNB3-217ENST00000550483 TMEM243Q9BU79 118 aa8.85□□□□□ -0.99
CACNB3-217ENST00000550483 VCX2Q9H322 139 aa8.85□□□□□ -0.99
CACNB3-217ENST00000550483 UQCR10Q9UDW1 63 aa8.85□□□□□ -0.99
CACNB3-217ENST00000550483 IGHV3-38A0A0C4DH36 116 aa8.84□□□□□ -0.99
CACNB3-217ENST00000550483 PRSS29PA6NIE9 313 aa8.84□□□□□ -0.99
CACNB3-217ENST00000550483 K7EIL1 84 aa8.84□□□□□ -0.99
CACNB3-217ENST00000550483 UBE2L6O14933 153 aa8.84□□□□□ -0.99
CACNB3-217ENST00000550483 GYPEP15421 78 aa8.84□□□□□ -0.99
CACNB3-217ENST00000550483 DGAT2L7PQ6IED9 249 aa8.84□□□□□ -0.99
CACNB3-217ENST00000550483 ATOH7Q8N100 152 aa8.84□□□□□ -0.99
CACNB3-217ENST00000550483 ATP6V0E2Q8NHE4 81 aa8.84□□□□□ -0.99
CACNB3-217ENST00000550483 TM2D3Q9BRN9 247 aa8.84□□□□□ -0.99
CACNB3-217ENST00000550483 MIEN1Q9BRT3 115 aa8.84□□□□□ -0.99
CACNB3-217ENST00000550483 C2orf88Q9BSF0 95 aa8.84□□□□□ -0.99
CACNB3-217ENST00000550483 CST9LQ9H4G1 147 aa8.84□□□□□ -0.99
CACNB3-217ENST00000550483 MRPL35Q9NZE8 188 aaKnown RBP8.84□□□□□ -0.99
CACNB3-217ENST00000550483 UBE2D4Q9Y2X8 147 aa8.84□□□□□ -0.99
CACNB3-217ENST00000550483 IGLV4-3A0A075B6K6 122 aa8.83□□□□□ -1
CACNB3-217ENST00000550483 PCP4L1A6NKN8 68 aa8.83□□□□□ -1
CACNB3-217ENST00000550483 DEFB4AO15263 64 aa8.83□□□□□ -1
CACNB3-217ENST00000550483 DDTP30046 118 aa8.83□□□□□ -1
CACNB3-217ENST00000550483 MRPL23Q16540 153 aaKnown RBP8.83□□□□□ -1
CACNB3-217ENST00000550483 TMEM101Q96IK0 257 aa8.83□□□□□ -1
CACNB3-217ENST00000550483 Q9UF83 564 aa8.83□□□□□ -1
CACNB3-217ENST00000550483 CELA1Q9UNI1 258 aa8.83□□□□□ -1
CACNB3-217ENST00000550483 TRBV6-8A0A0A6YYG3 113 aa8.82□□□□□ -1
CACNB3-217ENST00000550483 F5H768 121 aa8.82□□□□□ -1
CACNB3-217ENST00000550483 IGLC3P0DOY3 106 aa8.82□□□□□ -1
CACNB3-217ENST00000550483 SEC11AP67812 179 aa8.82□□□□□ -1
CACNB3-217ENST00000550483 SBSPONQ8IVN8 264 aa8.82□□□□□ -1
CACNB3-217ENST00000550483 AMELXQ99217 191 aa8.82□□□□□ -1
CACNB3-217ENST00000550483 PRO1933Q9H354 126 aa8.82□□□□□ -1
CACNB3-217ENST00000550483 ICOSQ9Y6W8 199 aa8.82□□□□□ -1
CACNB3-217ENST00000550483 HERVK_113P61574 105 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms