RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 CCL20P78556 96 aa14.73□□□□□ -0.05
SMARCD1-209ENST00000550477 IGLV4-60A0A075B6I1 120 aa14.72□□□□□ -0.05
SMARCD1-209ENST00000550477 EIF5AL1Q6IS14 154 aaKnown RBP14.72□□□□□ -0.05
SMARCD1-209ENST00000550477 C7orf33Q8WU49 177 aa14.72□□□□□ -0.05
SMARCD1-209ENST00000550477 FAT3Q8TDW7 4589 aa14.72□□□□□ -0.05
SMARCD1-209ENST00000550477 A0A087WYN8 130 aa14.71□□□□□ -0.05
SMARCD1-209ENST00000550477 TRAV1-1A0A0B4J248 108 aa14.7□□□□□ -0.06
SMARCD1-209ENST00000550477 C19orf71A6NCJ1 209 aa14.7□□□□□ -0.06
SMARCD1-209ENST00000550477 PDE6DO43924 150 aa14.7□□□□□ -0.06
SMARCD1-209ENST00000550477 NTF3P20783 257 aa14.7□□□□□ -0.06
SMARCD1-209ENST00000550477 LYZL1Q6UWQ5 148 aa14.7□□□□□ -0.06
SMARCD1-209ENST00000550477 AMMECR1LQ6DCA0 310 aa14.68□□□□□ -0.06
SMARCD1-209ENST00000550477 SPACA4Q8TDM5 124 aa14.68□□□□□ -0.06
SMARCD1-209ENST00000550477 MED9Q9NWA0 146 aa14.68□□□□□ -0.06
SMARCD1-209ENST00000550477 RAB19A4D1S5 217 aa14.67□□□□□ -0.06
SMARCD1-209ENST00000550477 RPS10P46783 165 aaKnown RBP14.67□□□□□ -0.06
SMARCD1-209ENST00000550477 MEF2BQ02080 365 aaPredicted RBP14.67□□□□□ -0.06
SMARCD1-209ENST00000550477 C9orf62Q8N4C0 152 aa14.67□□□□□ -0.06
SMARCD1-209ENST00000550477 GFRA4Q9GZZ7 299 aa14.67□□□□□ -0.06
SMARCD1-209ENST00000550477 IGKV3OR2-268A0A0C4DH90 116 aa14.66□□□□□ -0.06
SMARCD1-209ENST00000550477 GAGE12HA6NDE8 117 aa14.66□□□□□ -0.06
SMARCD1-209ENST00000550477 TWIST1Q15672 202 aa14.66□□□□□ -0.06
SMARCD1-209ENST00000550477 HMCN2Q8NDA2 5059 aa14.65□□□□□ -0.06
SMARCD1-209ENST00000550477 SLPIP03973 132 aa14.65□□□□□ -0.06
SMARCD1-209ENST00000550477 CHTF8P0CG12 524 aa14.65□□□□□ -0.06
SMARCD1-209ENST00000550477 SMIM15Q7Z3B0 74 aa14.65□□□□□ -0.06
SMARCD1-209ENST00000550477 PLAC8Q9NZF1 115 aa14.65□□□□□ -0.06
SMARCD1-209ENST00000550477 NDUFS6O75380 124 aaKnown RBP14.64□□□□□ -0.07
SMARCD1-209ENST00000550477 NCR2O95944 276 aa14.63□□□□□ -0.07
SMARCD1-209ENST00000550477 MT1HL1P0DM35 61 aa14.63□□□□□ -0.07
SMARCD1-209ENST00000550477 COX6A2Q02221 97 aa14.63□□□□□ -0.07
SMARCD1-209ENST00000550477 PKIGQ9Y2B9 76 aa14.63□□□□□ -0.07
SMARCD1-209ENST00000550477 H7C423 109 aa14.62□□□□□ -0.07
SMARCD1-209ENST00000550477 RNASEKQ6P5S7 137 aaKnown RBP14.62□□□□□ -0.07
SMARCD1-209ENST00000550477 TEX261Q6UWH6 196 aa14.62□□□□□ -0.07
SMARCD1-209ENST00000550477 GTSF1Q8WW33 167 aa14.62□□□□□ -0.07
SMARCD1-209ENST00000550477 PHOX2AO14813 284 aa14.61□□□□□ -0.07
SMARCD1-209ENST00000550477 MAJINQ3KP22 176 aa14.61□□□□□ -0.07
SMARCD1-209ENST00000550477 NUDT10Q8NFP7 164 aa14.61□□□□□ -0.07
SMARCD1-209ENST00000550477 NUDT11Q96G61 164 aa14.61□□□□□ -0.07
SMARCD1-209ENST00000550477 PKHD1L1Q86WI1 4243 aa14.61□□□□□ -0.07
SMARCD1-209ENST00000550477 TAGLN2P37802 199 aaKnown RBP14.6□□□□□ -0.07
SMARCD1-209ENST00000550477 CTRLP40313 264 aa14.6□□□□□ -0.07
SMARCD1-209ENST00000550477 C15orf56Q8N910 161 aa14.6□□□□□ -0.07
SMARCD1-209ENST00000550477 CHCHD10Q8WYQ3 142 aaPredicted RBP14.6□□□□□ -0.07
SMARCD1-209ENST00000550477 HIGD2BQ4VC39 106 aa14.59□□□□□ -0.07
SMARCD1-209ENST00000550477 GATD1Q8NB37 220 aa14.59□□□□□ -0.07
SMARCD1-209ENST00000550477 CNFNQ9BYD5 112 aa14.59□□□□□ -0.07
SMARCD1-209ENST00000550477 IGKV2-24A0A0C4DH68 120 aa14.58□□□□□ -0.08
SMARCD1-209ENST00000550477 APCSP02743 223 aa14.58□□□□□ -0.08
SMARCD1-209ENST00000550477 BTF3L4Q96K17 158 aa14.58□□□□□ -0.08
SMARCD1-209ENST00000550477 RPP21Q9H633 154 aaKnown RBP14.58□□□□□ -0.08
SMARCD1-209ENST00000550477 LINC00474Q9P2X8 69 aa14.58□□□□□ -0.08
SMARCD1-209ENST00000550477 TRBV20OR9-2A0A075B6H5 130 aa14.57□□□□□ -0.08
SMARCD1-209ENST00000550477 BCL2P10415 239 aa14.57□□□□□ -0.08
SMARCD1-209ENST00000550477 STPG4Q8N801 248 aa14.57□□□□□ -0.08
SMARCD1-209ENST00000550477 TMEM101Q96IK0 257 aa14.57□□□□□ -0.08
SMARCD1-209ENST00000550477 TRAV26-2A0A0B4J265 109 aa14.56□□□□□ -0.08
SMARCD1-209ENST00000550477 PRSS3P2Q8NHM4 247 aa14.56□□□□□ -0.08
SMARCD1-209ENST00000550477 UBR4Q5T4S7 5183 aa14.55□□□□□ -0.08
SMARCD1-209ENST00000550477 GVQW2A0A096LPI5 108 aaPredicted RBP14.55□□□□□ -0.08
SMARCD1-209ENST00000550477 ZNF25P17030 456 aaPredicted RBP14.55□□□□□ -0.08
SMARCD1-209ENST00000550477 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.54□□□□□ -0.08
SMARCD1-209ENST00000550477 IGKV2-29A2NJV5 120 aaPredicted RBP14.54□□□□□ -0.08
SMARCD1-209ENST00000550477 FGF6P10767 208 aa14.54□□□□□ -0.08
SMARCD1-209ENST00000550477 PMCHP20382 165 aa14.54□□□□□ -0.08
SMARCD1-209ENST00000550477 Q6ZNX1 250 aa14.54□□□□□ -0.08
SMARCD1-209ENST00000550477 OR5A1Q8NGJ0 315 aa14.53□□□□□ -0.08
SMARCD1-209ENST00000550477 RPL39LQ96EH5 51 aaKnown RBP14.53□□□□□ -0.08
SMARCD1-209ENST00000550477 RNASE7Q9H1E1 156 aaKnown RBP14.53□□□□□ -0.08
SMARCD1-209ENST00000550477 SDHAF1A6NFY7 115 aa14.52□□□□□ -0.09
SMARCD1-209ENST00000550477 I3L3M4 83 aa14.52□□□□□ -0.09
SMARCD1-209ENST00000550477 LYPD6BQ8NI32 183 aa14.52□□□□□ -0.09
SMARCD1-209ENST00000550477 FAM210AQ96ND0 272 aa14.52□□□□□ -0.09
SMARCD1-209ENST00000550477 PRR3P79522 188 aaKnown RBP14.51□□□□□ -0.09
SMARCD1-209ENST00000550477 OCC1Q8TAD7 63 aa14.51□□□□□ -0.09
SMARCD1-209ENST00000550477 BORCS7Q96B45 105 aa14.51□□□□□ -0.09
SMARCD1-209ENST00000550477 LINC01600Q96MT4 127 aa14.51□□□□□ -0.09
SMARCD1-209ENST00000550477 IGHV1-58A0A0C4DH39 117 aa14.5□□□□□ -0.09
SMARCD1-209ENST00000550477 A8MWL6 223 aa14.49□□□□□ -0.09
SMARCD1-209ENST00000550477 GATCO43716 136 aaKnown RBP14.49□□□□□ -0.09
SMARCD1-209ENST00000550477 XCL1P47992 114 aa14.49□□□□□ -0.09
SMARCD1-209ENST00000550477 FOXI1Q12951 378 aa14.49□□□□□ -0.09
SMARCD1-209ENST00000550477 SS18Q15532 418 aa14.49□□□□□ -0.09
SMARCD1-209ENST00000550477 REG3GQ6UW15 175 aa14.49□□□□□ -0.09
SMARCD1-209ENST00000550477 SLC51BQ86UW2 128 aa14.49□□□□□ -0.09
SMARCD1-209ENST00000550477 ZNF561-AS1K7EIQ3 104 aa14.48□□□□□ -0.09
SMARCD1-209ENST00000550477 A0A096LNI7 61 aa14.47□□□□□ -0.09
SMARCD1-209ENST00000550477 SPINK6Q6UWN8 80 aa14.47□□□□□ -0.09
SMARCD1-209ENST00000550477 MRAP2Q96G30 205 aa14.47□□□□□ -0.09
SMARCD1-209ENST00000550477 CARD19Q96LW7 228 aa14.47□□□□□ -0.09
SMARCD1-209ENST00000550477 ST20Q9HBF5 79 aa14.47□□□□□ -0.09
SMARCD1-209ENST00000550477 LINC00959A0A1B0GUT2 108 aa14.46□□□□□ -0.09
SMARCD1-209ENST00000550477 K7EN84 100 aa14.46□□□□□ -0.09
SMARCD1-209ENST00000550477 CCL25O15444 150 aa14.46□□□□□ -0.09
SMARCD1-209ENST00000550477 TRBV6-5A0A0K0K1A5 114 aa14.45□□□□□ -0.1
SMARCD1-209ENST00000550477 FOXA3P55318 350 aaPredicted RBP14.45□□□□□ -0.1
SMARCD1-209ENST00000550477 Q6ZRP5 223 aa14.44□□□□□ -0.1
SMARCD1-209ENST00000550477 ISOC2Q96AB3 205 aa14.44□□□□□ -0.1
SMARCD1-209ENST00000550477 A0A0J9YXV3 536 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms