RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 BAALCQ8WXS3 180 aa11.39□□□□□ -0.59
CHMP1A-208ENST00000550102 TMEM191AQ9H0A3 160 aa11.39□□□□□ -0.59
CHMP1A-208ENST00000550102 UBE2L6O14933 153 aa11.38□□□□□ -0.59
CHMP1A-208ENST00000550102 RIGQ13278 110 aa11.38□□□□□ -0.59
CHMP1A-208ENST00000550102 CLPSL2Q6UWE3 100 aa11.38□□□□□ -0.59
CHMP1A-208ENST00000550102 PRR34Q9NV39 138 aa11.38□□□□□ -0.59
CHMP1A-208ENST00000550102 NAT8BQ9UHF3 227 aa11.38□□□□□ -0.59
CHMP1A-208ENST00000550102 RAB14P61106 215 aa11.37□□□□□ -0.59
CHMP1A-208ENST00000550102 LINC00269Q8N2A0 174 aa11.37□□□□□ -0.59
CHMP1A-208ENST00000550102 NUP35Q8NFH5 326 aa11.37□□□□□ -0.59
CHMP1A-208ENST00000550102 DEFB104AQ8WTQ1 72 aa11.37□□□□□ -0.59
CHMP1A-208ENST00000550102 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.36□□□□□ -0.59
CHMP1A-208ENST00000550102 SDHAF1A6NFY7 115 aa11.36□□□□□ -0.59
CHMP1A-208ENST00000550102 NCR2O95944 276 aa11.36□□□□□ -0.59
CHMP1A-208ENST00000550102 MRAP2Q96G30 205 aa11.36□□□□□ -0.59
CHMP1A-208ENST00000550102 TRBV6-5A0A0K0K1A5 114 aa11.35□□□□□ -0.59
CHMP1A-208ENST00000550102 A0A1B0GUV1 79 aa11.35□□□□□ -0.59
CHMP1A-208ENST00000550102 HLA-DQA1P01909 254 aa11.35□□□□□ -0.59
CHMP1A-208ENST00000550102 APCSP02743 223 aa11.35□□□□□ -0.59
CHMP1A-208ENST00000550102 Q8N1X5 172 aa11.35□□□□□ -0.59
CHMP1A-208ENST00000550102 TMEM70Q9BUB7 260 aa11.35□□□□□ -0.59
CHMP1A-208ENST00000550102 SMIM27A0A1W2PRY6 76 aa11.34□□□□□ -0.59
CHMP1A-208ENST00000550102 REG3AQ06141 175 aa11.34□□□□□ -0.59
CHMP1A-208ENST00000550102 C14orf177Q52M58 125 aa11.34□□□□□ -0.59
CHMP1A-208ENST00000550102 AMN1Q8IY45 258 aa11.34□□□□□ -0.59
CHMP1A-208ENST00000550102 C20orf203Q8NBC4 194 aa11.34□□□□□ -0.59
CHMP1A-208ENST00000550102 RNF185Q96GF1 192 aa11.34□□□□□ -0.59
CHMP1A-208ENST00000550102 IGLV4-60A0A075B6I1 120 aa11.33□□□□□ -0.6
CHMP1A-208ENST00000550102 ST20Q9HBF5 79 aa11.33□□□□□ -0.6
CHMP1A-208ENST00000550102 A0A1B0GW15 77 aa11.32□□□□□ -0.6
CHMP1A-208ENST00000550102 RAB4AP20338 218 aa11.32□□□□□ -0.6
CHMP1A-208ENST00000550102 XGP55808 180 aa11.32□□□□□ -0.6
CHMP1A-208ENST00000550102 KRTAP4-5Q9BYR2 181 aa11.32□□□□□ -0.6
CHMP1A-208ENST00000550102 USP17L23D6RBM5 183 aa11.31□□□□□ -0.6
CHMP1A-208ENST00000550102 I3L3M4 83 aa11.31□□□□□ -0.6
CHMP1A-208ENST00000550102 GAS8-AS1O95177 125 aa11.31□□□□□ -0.6
CHMP1A-208ENST00000550102 PMCHP20382 165 aa11.31□□□□□ -0.6
CHMP1A-208ENST00000550102 AMMECR1LQ6DCA0 310 aa11.31□□□□□ -0.6
CHMP1A-208ENST00000550102 TRAV8-4A0A0B4J246 113 aa11.3□□□□□ -0.6
CHMP1A-208ENST00000550102 H7C423 109 aa11.3□□□□□ -0.6
CHMP1A-208ENST00000550102 PPP1R17O96001 155 aa11.3□□□□□ -0.6
CHMP1A-208ENST00000550102 RPS10P46783 165 aaKnown RBP11.3□□□□□ -0.6
CHMP1A-208ENST00000550102 IGLV10-54A0A075B6I4 117 aa11.29□□□□□ -0.6
CHMP1A-208ENST00000550102 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.29□□□□□ -0.6
CHMP1A-208ENST00000550102 IGKV2-29A2NJV5 120 aaPredicted RBP11.29□□□□□ -0.6
CHMP1A-208ENST00000550102 TSHBP01222 138 aa11.29□□□□□ -0.6
CHMP1A-208ENST00000550102 S100A8P05109 93 aa11.29□□□□□ -0.6
CHMP1A-208ENST00000550102 CLLU1Q5K131 121 aa11.29□□□□□ -0.6
CHMP1A-208ENST00000550102 KRTAP26-1Q6PEX3 210 aa11.29□□□□□ -0.6
CHMP1A-208ENST00000550102 TMEM242Q9NWH2 141 aa11.29□□□□□ -0.6
CHMP1A-208ENST00000550102 TRBV27A0A0K0K1C4 114 aa11.28□□□□□ -0.6
CHMP1A-208ENST00000550102 SMKR1H3BMG3 65 aa11.28□□□□□ -0.6
CHMP1A-208ENST00000550102 CAMPP49913 170 aa11.28□□□□□ -0.6
CHMP1A-208ENST00000550102 PNRC1Q12796 327 aaPredicted RBP11.28□□□□□ -0.6
CHMP1A-208ENST00000550102 ABCA13Q86UQ4 5058 aa11.27□□□□□ -0.61
CHMP1A-208ENST00000550102 PPP1R2P9O14990 202 aa11.27□□□□□ -0.61
CHMP1A-208ENST00000550102 FGF6P10767 208 aa11.27□□□□□ -0.61
CHMP1A-208ENST00000550102 ZNF25P17030 456 aaPredicted RBP11.27□□□□□ -0.61
CHMP1A-208ENST00000550102 HBBP68871 147 aa11.27□□□□□ -0.61
CHMP1A-208ENST00000550102 FAM104BQ5XKR9 115 aa11.27□□□□□ -0.61
CHMP1A-208ENST00000550102 MRPL54Q6P161 138 aaKnown RBP11.27□□□□□ -0.61
CHMP1A-208ENST00000550102 RNASEKQ6P5S7 137 aaKnown RBP11.27□□□□□ -0.61
CHMP1A-208ENST00000550102 POLR2KP53803 58 aaKnown RBP11.26□□□□□ -0.61
CHMP1A-208ENST00000550102 HAMPP81172 84 aa11.26□□□□□ -0.61
CHMP1A-208ENST00000550102 MRPL51Q4U2R6 128 aaKnown RBP11.26□□□□□ -0.61
CHMP1A-208ENST00000550102 Q6ZSA8 131 aa11.26□□□□□ -0.61
CHMP1A-208ENST00000550102 NRACQ8N912 160 aa11.26□□□□□ -0.61
CHMP1A-208ENST00000550102 A0A1B0GXF2 115 aa11.25□□□□□ -0.61
CHMP1A-208ENST00000550102 EPM2AB3EWF7 344 aa11.25□□□□□ -0.61
CHMP1A-208ENST00000550102 F8W036 122 aa11.25□□□□□ -0.61
CHMP1A-208ENST00000550102 ESDP10768 282 aa11.25□□□□□ -0.61
CHMP1A-208ENST00000550102 SUMO2P61956 95 aaKnown RBP11.25□□□□□ -0.61
CHMP1A-208ENST00000550102 LINC01620Q4KN68 170 aa11.25□□□□□ -0.61
CHMP1A-208ENST00000550102 BTF3L4Q96K17 158 aa11.25□□□□□ -0.61
CHMP1A-208ENST00000550102 FAM30AQ9NZY2 134 aa11.25□□□□□ -0.61
CHMP1A-208ENST00000550102 IGKV3OR2-268A0A0C4DH90 116 aa11.24□□□□□ -0.61
CHMP1A-208ENST00000550102 C7orf77A4D0Y5 90 aa11.24□□□□□ -0.61
CHMP1A-208ENST00000550102 VCYO14598 125 aa11.24□□□□□ -0.61
CHMP1A-208ENST00000550102 FCER1GP30273 86 aa11.24□□□□□ -0.61
CHMP1A-208ENST00000550102 ATP5L2Q7Z4Y8 100 aa11.24□□□□□ -0.61
CHMP1A-208ENST00000550102 TMEM101Q96IK0 257 aa11.24□□□□□ -0.61
CHMP1A-208ENST00000550102 LINC00862A6NCI5 91 aa11.23□□□□□ -0.61
CHMP1A-208ENST00000550102 MT-ND4LP03901 98 aa11.23□□□□□ -0.61
CHMP1A-208ENST00000550102 PRSS1P07477 247 aa11.23□□□□□ -0.61
CHMP1A-208ENST00000550102 OR5A1Q8NGJ0 315 aa11.23□□□□□ -0.61
CHMP1A-208ENST00000550102 KIR2DL4Q99706 377 aa11.23□□□□□ -0.61
CHMP1A-208ENST00000550102 CKS2P33552 79 aa11.22□□□□□ -0.61
CHMP1A-208ENST00000550102 Q5VSD8 79 aa11.22□□□□□ -0.61
CHMP1A-208ENST00000550102 CLRN3Q8NCR9 226 aa11.22□□□□□ -0.61
CHMP1A-208ENST00000550102 IFITM2Q01629 132 aa11.21□□□□□ -0.61
CHMP1A-208ENST00000550102 DGAT2L7PQ6IED9 249 aa11.21□□□□□ -0.61
CHMP1A-208ENST00000550102 MRPL52Q86TS9 123 aaKnown RBP11.21□□□□□ -0.61
CHMP1A-208ENST00000550102 ANAPC16Q96DE5 110 aa11.21□□□□□ -0.61
CHMP1A-208ENST00000550102 C20orf78Q9BR46 151 aa11.21□□□□□ -0.61
CHMP1A-208ENST00000550102 TRBV24-1A0A075B6N3 115 aa11.2□□□□□ -0.62
CHMP1A-208ENST00000550102 GAGE12HA6NDE8 117 aa11.2□□□□□ -0.62
CHMP1A-208ENST00000550102 SMR3BP02814 79 aaPredicted RBP11.2□□□□□ -0.62
CHMP1A-208ENST00000550102 UQCC3Q6UW78 93 aa11.2□□□□□ -0.62
CHMP1A-208ENST00000550102 SRRM2Q9UQ35 2752 aaKnown RBP11.2□□□□□ -0.62
CHMP1A-208ENST00000550102 hDV102S1A0JD36 115 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms