RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 UMAD1C9J7I0 102 aa4.45□□□□□ -1.7
TMEM116-208ENST00000549537 H3BVH4 76 aa4.45□□□□□ -1.7
TMEM116-208ENST00000549537 OXTP01178 125 aa4.45□□□□□ -1.7
TMEM116-208ENST00000549537 FUSP35637 526 aaKnown RBP eCLIP4.45□□□□□ -1.7
TMEM116-208ENST00000549537 ASIPP42127 132 aa4.45□□□□□ -1.7
TMEM116-208ENST00000549537 ERVFC1-1P60608 527 aa4.45□□□□□ -1.7
TMEM116-208ENST00000549537 LAGE3Q14657 143 aa4.45□□□□□ -1.7
TMEM116-208ENST00000549537 FAM162BQ5T6X4 162 aa4.45□□□□□ -1.7
TMEM116-208ENST00000549537 Q6ZVQ6 151 aa4.45□□□□□ -1.7
TMEM116-208ENST00000549537 C10orf126Q8N4M7 172 aa4.45□□□□□ -1.7
TMEM116-208ENST00000549537 PRADC1Q9BSG0 188 aa4.45□□□□□ -1.7
TMEM116-208ENST00000549537 BIN3Q9NQY0 253 aa4.45□□□□□ -1.7
TMEM116-208ENST00000549537 GRIFINA4D1Z8 144 aa4.44□□□□□ -1.7
TMEM116-208ENST00000549537 LRCOL1A6NCL2 159 aa4.44□□□□□ -1.7
TMEM116-208ENST00000549537 M0R036 132 aa4.44□□□□□ -1.7
TMEM116-208ENST00000549537 ARMS2P0C7Q2 107 aa4.44□□□□□ -1.7
TMEM116-208ENST00000549537 S100A4P26447 101 aaKnown RBP4.44□□□□□ -1.7
TMEM116-208ENST00000549537 UBE2G1P62253 170 aa4.44□□□□□ -1.7
TMEM116-208ENST00000549537 LGALSLQ3ZCW2 172 aaPredicted RBP4.44□□□□□ -1.7
TMEM116-208ENST00000549537 LELP1Q5T871 98 aa4.44□□□□□ -1.7
TMEM116-208ENST00000549537 C14orf178Q8N769 122 aaPredicted RBP4.44□□□□□ -1.7
TMEM116-208ENST00000549537 ATP6V0E2Q8NHE4 81 aa4.44□□□□□ -1.7
TMEM116-208ENST00000549537 STOML3Q8TAV4 291 aa4.44□□□□□ -1.7
TMEM116-208ENST00000549537 FAM213BQ8TBF2 198 aa4.44□□□□□ -1.7
TMEM116-208ENST00000549537 SFT2D1Q8WV19 159 aa4.44□□□□□ -1.7
TMEM116-208ENST00000549537 ZNF471Q9BX82 626 aaPredicted RBP4.44□□□□□ -1.7
TMEM116-208ENST00000549537 GTSF1LQ9H1H1 148 aa4.44□□□□□ -1.7
TMEM116-208ENST00000549537 TRAV8-6A0A0B4J262 113 aa4.43□□□□□ -1.7
TMEM116-208ENST00000549537 KANTRA0A1W2PQU2 76 aa4.43□□□□□ -1.7
TMEM116-208ENST00000549537 GAGE12JA6NER3 117 aa4.43□□□□□ -1.7
TMEM116-208ENST00000549537 AKR1C3P42330 323 aa4.43□□□□□ -1.7
TMEM116-208ENST00000549537 KRTAP10-1P60331 282 aa4.43□□□□□ -1.7
TMEM116-208ENST00000549537 CCL20P78556 96 aa4.43□□□□□ -1.7
TMEM116-208ENST00000549537 TAL2Q16559 108 aa4.43□□□□□ -1.7
TMEM116-208ENST00000549537 OR10J3Q5JRS4 329 aa4.43□□□□□ -1.7
TMEM116-208ENST00000549537 TMUB2Q71RG4 321 aa4.43□□□□□ -1.7
TMEM116-208ENST00000549537 C15orf54Q8N8G6 183 aa4.43□□□□□ -1.7
TMEM116-208ENST00000549537 SFRP2Q96HF1 295 aa4.43□□□□□ -1.7
TMEM116-208ENST00000549537 TMSB15BA0A087X1C1 80 aa4.42□□□□□ -1.7
TMEM116-208ENST00000549537 TRAV1-1A0A0B4J248 108 aa4.42□□□□□ -1.7
TMEM116-208ENST00000549537 A0A1B0GV50 99 aa4.42□□□□□ -1.7
TMEM116-208ENST00000549537 LINC00862A6NCI5 91 aa4.42□□□□□ -1.7
TMEM116-208ENST00000549537 KRTAP29-1A8MX34 341 aaPredicted RBP4.42□□□□□ -1.7
TMEM116-208ENST00000549537 IGHV3-30P01768 117 aa4.42□□□□□ -1.7
TMEM116-208ENST00000549537 IGHV3-33P01772 117 aa4.42□□□□□ -1.7
TMEM116-208ENST00000549537 CXCL1P09341 107 aa4.42□□□□□ -1.7
TMEM116-208ENST00000549537 IGHV3-30-3P0DP02 117 aa4.42□□□□□ -1.7
TMEM116-208ENST00000549537 IGHV3-30-5P0DP03 117 aa4.42□□□□□ -1.7
TMEM116-208ENST00000549537 RPL19P84098 196 aaKnown RBP4.42□□□□□ -1.7
TMEM116-208ENST00000549537 GAGE4Q13068 117 aa4.42□□□□□ -1.7
TMEM116-208ENST00000549537 GAGE5Q13069 117 aa4.42□□□□□ -1.7
TMEM116-208ENST00000549537 C11orf52Q96A22 123 aa4.42□□□□□ -1.7
TMEM116-208ENST00000549537 PHLDA3Q9Y5J5 127 aa4.42□□□□□ -1.7
TMEM116-208ENST00000549537 PKHD1L1Q86WI1 4243 aa4.41□□□□□ -1.7
TMEM116-208ENST00000549537 M0R381 172 aa4.41□□□□□ -1.7
TMEM116-208ENST00000549537 IGLV2-8P01709 118 aa4.41□□□□□ -1.7
TMEM116-208ENST00000549537 SCGB1A1P11684 91 aa4.41□□□□□ -1.7
TMEM116-208ENST00000549537 TPT1P13693 172 aaKnown RBP4.41□□□□□ -1.7
TMEM116-208ENST00000549537 RPL35P42766 123 aaKnown RBP4.41□□□□□ -1.7
TMEM116-208ENST00000549537 AKR1D1P51857 326 aa4.41□□□□□ -1.7
TMEM116-208ENST00000549537 EIF5AP63241 154 aaKnown RBP4.41□□□□□ -1.7
TMEM116-208ENST00000549537 BAGE2Q86Y30 109 aa4.41□□□□□ -1.7
TMEM116-208ENST00000549537 TCTE3Q8IZS6 198 aa4.41□□□□□ -1.7
TMEM116-208ENST00000549537 OR10AG1Q8NH19 301 aa4.41□□□□□ -1.7
TMEM116-208ENST00000549537 DERL1Q9BUN8 251 aa4.41□□□□□ -1.7
TMEM116-208ENST00000549537 Q9HAA7 133 aa4.41□□□□□ -1.7
TMEM116-208ENST00000549537 HMCN2Q8NDA2 5059 aa4.41□□□□□ -1.7
TMEM116-208ENST00000549537 A0A087WWC5 75 aa4.4□□□□□ -1.71
TMEM116-208ENST00000549537 TRBV10-1A0A0K0K1A3 114 aa4.4□□□□□ -1.71
TMEM116-208ENST00000549537 A0A1B0GV72 72 aa4.4□□□□□ -1.71
TMEM116-208ENST00000549537 DLEU1O43261 78 aa4.4□□□□□ -1.71
TMEM116-208ENST00000549537 OR5AL1P0C617 328 aa4.4□□□□□ -1.71
TMEM116-208ENST00000549537 SULT1A2P50226 295 aa4.4□□□□□ -1.71
TMEM116-208ENST00000549537 RAB5CP51148 216 aa4.4□□□□□ -1.71
TMEM116-208ENST00000549537 UBE2D3P61077 147 aa4.4□□□□□ -1.71
TMEM116-208ENST00000549537 UBE2D2P62837 147 aa4.4□□□□□ -1.71
TMEM116-208ENST00000549537 SRSF9Q13242 221 aaKnown RBP eCLIP4.4□□□□□ -1.71
TMEM116-208ENST00000549537 WFDC2Q14508 124 aa4.4□□□□□ -1.71
TMEM116-208ENST00000549537 FAM74A4Q5TZK3 123 aa4.4□□□□□ -1.71
TMEM116-208ENST00000549537 DAZ4Q86SG3 579 aaKnown RBP4.4□□□□□ -1.71
TMEM116-208ENST00000549537 MRPL52Q86TS9 123 aaKnown RBP4.4□□□□□ -1.71
TMEM116-208ENST00000549537 Q8N814 137 aa4.4□□□□□ -1.71
TMEM116-208ENST00000549537 OR10G8Q8NGN5 311 aa4.4□□□□□ -1.71
TMEM116-208ENST00000549537 C14orf144Q96I85 54 aa4.4□□□□□ -1.71
TMEM116-208ENST00000549537 MANBALQ9NQG1 85 aa4.4□□□□□ -1.71
TMEM116-208ENST00000549537 DAZ3Q9NR90 486 aaKnown RBP4.4□□□□□ -1.71
TMEM116-208ENST00000549537 TRBV20OR9-2A0A075B6H5 130 aa4.39□□□□□ -1.71
TMEM116-208ENST00000549537 C1QBP02746 253 aa4.39□□□□□ -1.71
TMEM116-208ENST00000549537 NIT1Q86X76 327 aa4.39□□□□□ -1.71
TMEM116-208ENST00000549537 NTN5Q8WTR8 489 aaPredicted RBP4.39□□□□□ -1.71
TMEM116-208ENST00000549537 DNAJC30Q96LL9 226 aa4.39□□□□□ -1.71
TMEM116-208ENST00000549537 NIT2Q9NQR4 276 aa4.39□□□□□ -1.71
TMEM116-208ENST00000549537 GNG13Q9P2W3 67 aa4.39□□□□□ -1.71
TMEM116-208ENST00000549537 COX11Q9Y6N1 276 aa4.39□□□□□ -1.71
TMEM116-208ENST00000549537 KIF25-AS1Q9Y6Z4 181 aa4.39□□□□□ -1.71
TMEM116-208ENST00000549537 FAT3Q8TDW7 4589 aa4.39□□□□□ -1.71
TMEM116-208ENST00000549537 TRBV7-3A0A075B6L6 115 aa4.38□□□□□ -1.71
TMEM116-208ENST00000549537 IGLV5-52A0A0A0MRZ9 124 aa4.38□□□□□ -1.71
TMEM116-208ENST00000549537 TRAV8-3A0A0A6YYJ7 113 aa4.38□□□□□ -1.71
TMEM116-208ENST00000549537 MUC21A0A0G2JKD1 596 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms