RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 ACTR3CQ9C0K3 210 aaPredicted RBP6.61□□□□□ -1.35
TRAFD1-206ENST00000549358 MBP02144 154 aa6.6□□□□□ -1.35
TRAFD1-206ENST00000549358 SMIM17P0DL12 118 aa6.6□□□□□ -1.35
TRAFD1-206ENST00000549358 ATP6V0CP27449 155 aa6.6□□□□□ -1.35
TRAFD1-206ENST00000549358 UBE2G1P62253 170 aa6.6□□□□□ -1.35
TRAFD1-206ENST00000549358 LCE4AQ5TA78 99 aa6.6□□□□□ -1.35
TRAFD1-206ENST00000549358 UBE2L6O14933 153 aa6.59□□□□□ -1.35
TRAFD1-206ENST00000549358 FMC1Q96HJ9 113 aa6.59□□□□□ -1.35
TRAFD1-206ENST00000549358 PSMG3Q9BT73 122 aaPredicted RBP6.59□□□□□ -1.35
TRAFD1-206ENST00000549358 GVQW2A0A096LPI5 108 aaPredicted RBP6.58□□□□□ -1.36
TRAFD1-206ENST00000549358 FAM74A7A6NL05 159 aa6.58□□□□□ -1.36
TRAFD1-206ENST00000549358 M0QY20 66 aa6.58□□□□□ -1.36
TRAFD1-206ENST00000549358 LTAP01374 205 aa6.58□□□□□ -1.36
TRAFD1-206ENST00000549358 NKX2-5P52952 324 aaPredicted RBP6.58□□□□□ -1.36
TRAFD1-206ENST00000549358 SERF2P84101 59 aa6.58□□□□□ -1.36
TRAFD1-206ENST00000549358 CHCHD10Q8WYQ3 142 aaPredicted RBP6.58□□□□□ -1.36
TRAFD1-206ENST00000549358 LINC00526Q96FQ7 95 aa6.58□□□□□ -1.36
TRAFD1-206ENST00000549358 NKX6-2Q9C056 277 aaPredicted RBP6.58□□□□□ -1.36
TRAFD1-206ENST00000549358 TNFSF18Q9UNG2 199 aa6.58□□□□□ -1.36
TRAFD1-206ENST00000549358 SNAI2O43623 268 aa6.57□□□□□ -1.36
TRAFD1-206ENST00000549358 MGPP08493 103 aa6.57□□□□□ -1.36
TRAFD1-206ENST00000549358 CCDC32Q9BV29 185 aa6.57□□□□□ -1.36
TRAFD1-206ENST00000549358 PKIGQ9Y2B9 76 aa6.57□□□□□ -1.36
TRAFD1-206ENST00000549358 SSNA1O43805 119 aa6.56□□□□□ -1.36
TRAFD1-206ENST00000549358 MT-ND6P03923 174 aa6.56□□□□□ -1.36
TRAFD1-206ENST00000549358 OR5AL1P0C617 328 aa6.56□□□□□ -1.36
TRAFD1-206ENST00000549358 ZNF726P1Q15940 193 aa6.56□□□□□ -1.36
TRAFD1-206ENST00000549358 SUMO4Q6EEV6 95 aa6.56□□□□□ -1.36
TRAFD1-206ENST00000549358 ENKURQ8TC29 256 aa6.56□□□□□ -1.36
TRAFD1-206ENST00000549358 AP1S3Q96PC3 154 aa6.56□□□□□ -1.36
TRAFD1-206ENST00000549358 SCGB1D1O95968 90 aa6.55□□□□□ -1.36
TRAFD1-206ENST00000549358 CXCL1P09341 107 aa6.55□□□□□ -1.36
TRAFD1-206ENST00000549358 AMTP48728 403 aa6.55□□□□□ -1.36
TRAFD1-206ENST00000549358 GAGE2BQ13066 116 aa6.55□□□□□ -1.36
TRAFD1-206ENST00000549358 C1orf137Q5JT78 98 aa6.55□□□□□ -1.36
TRAFD1-206ENST00000549358 CARD19Q96LW7 228 aa6.55□□□□□ -1.36
TRAFD1-206ENST00000549358 A0A1W2PNN7 141 aa6.54□□□□□ -1.36
TRAFD1-206ENST00000549358 INMT-MINDY4F8WBC2 141 aa6.54□□□□□ -1.36
TRAFD1-206ENST00000549358 PTTG1IPP53801 180 aa6.54□□□□□ -1.36
TRAFD1-206ENST00000549358 FOXI1Q12951 378 aa6.54□□□□□ -1.36
TRAFD1-206ENST00000549358 KRTAP19-4Q3LI73 84 aa6.54□□□□□ -1.36
TRAFD1-206ENST00000549358 FER1L6-AS1Q8NA97 138 aa6.54□□□□□ -1.36
TRAFD1-206ENST00000549358 DIRC1Q969H9 104 aa6.54□□□□□ -1.36
TRAFD1-206ENST00000549358 PGLYRP4Q96LB8 373 aa6.54□□□□□ -1.36
TRAFD1-206ENST00000549358 FSIP2Q5CZC0 6907 aa6.54□□□□□ -1.36
TRAFD1-206ENST00000549358 CTXND1A0A1B0GTU2 59 aa6.53□□□□□ -1.36
TRAFD1-206ENST00000549358 COTL1Q14019 142 aa6.53□□□□□ -1.36
TRAFD1-206ENST00000549358 CST9LP1Q5W188 147 aa6.53□□□□□ -1.36
TRAFD1-206ENST00000549358 RASL11AQ6T310 242 aa6.53□□□□□ -1.36
TRAFD1-206ENST00000549358 AKR1C3P42330 323 aa6.52□□□□□ -1.37
TRAFD1-206ENST00000549358 XCL1P47992 114 aa6.52□□□□□ -1.37
TRAFD1-206ENST00000549358 SYCNQ0VAF6 134 aa6.52□□□□□ -1.37
TRAFD1-206ENST00000549358 AMMECR1LQ6DCA0 310 aa6.52□□□□□ -1.37
TRAFD1-206ENST00000549358 STOML3Q8TAV4 291 aa6.52□□□□□ -1.37
TRAFD1-206ENST00000549358 TPPP3Q9BW30 176 aa6.52□□□□□ -1.37
TRAFD1-206ENST00000549358 NIT2Q9NQR4 276 aa6.52□□□□□ -1.37
TRAFD1-206ENST00000549358 IGHV1-58A0A0C4DH39 117 aa6.51□□□□□ -1.37
TRAFD1-206ENST00000549358 LOC107984640A0A0U1RRK4 108 aa6.51□□□□□ -1.37
TRAFD1-206ENST00000549358 IGLV7-43P04211 117 aa6.51□□□□□ -1.37
TRAFD1-206ENST00000549358 RNASEKQ6P5S7 137 aaKnown RBP6.51□□□□□ -1.37
TRAFD1-206ENST00000549358 PHF5AQ7RTV0 110 aaKnown RBP6.51□□□□□ -1.37
TRAFD1-206ENST00000549358 MLST8Q9BVC4 326 aa6.51□□□□□ -1.37
TRAFD1-206ENST00000549358 KRTAP4-2Q9BYR5 136 aa6.51□□□□□ -1.37
TRAFD1-206ENST00000549358 IGLV1-50A0A075B6I6 118 aa6.5□□□□□ -1.37
TRAFD1-206ENST00000549358 H0Y9J4 135 aa6.5□□□□□ -1.37
TRAFD1-206ENST00000549358 C9orf116Q5BN46 136 aaPredicted RBP6.5□□□□□ -1.37
TRAFD1-206ENST00000549358 BAGE2Q86Y30 109 aa6.5□□□□□ -1.37
TRAFD1-206ENST00000549358 TCEAL7Q9BRU2 100 aa6.5□□□□□ -1.37
TRAFD1-206ENST00000549358 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.49□□□□□ -1.37
TRAFD1-206ENST00000549358 IGKV2-29A2NJV5 120 aaPredicted RBP6.49□□□□□ -1.37
TRAFD1-206ENST00000549358 CCL25O15444 150 aa6.49□□□□□ -1.37
TRAFD1-206ENST00000549358 BCL2P10415 239 aa6.49□□□□□ -1.37
TRAFD1-206ENST00000549358 FHITP49789 147 aa6.49□□□□□ -1.37
TRAFD1-206ENST00000549358 UBE2D1P51668 147 aa6.49□□□□□ -1.37
TRAFD1-206ENST00000549358 RPL7L1Q6DKI1 246 aaKnown RBP6.49□□□□□ -1.37
TRAFD1-206ENST00000549358 MARVELD1Q9BSK0 173 aa6.49□□□□□ -1.37
TRAFD1-206ENST00000549358 TRAV1-1A0A0B4J248 108 aa6.48□□□□□ -1.37
TRAFD1-206ENST00000549358 LINC00959A0A1B0GUT2 108 aa6.48□□□□□ -1.37
TRAFD1-206ENST00000549358 MAP1LC3B2A6NCE7 125 aa6.48□□□□□ -1.37
TRAFD1-206ENST00000549358 S100A9P06702 114 aaKnown RBP6.48□□□□□ -1.37
TRAFD1-206ENST00000549358 FGF6P10767 208 aa6.48□□□□□ -1.37
TRAFD1-206ENST00000549358 NTF3P20783 257 aa6.48□□□□□ -1.37
TRAFD1-206ENST00000549358 CAMPP49913 170 aa6.48□□□□□ -1.37
TRAFD1-206ENST00000549358 EIF5AP63241 154 aaKnown RBP6.48□□□□□ -1.37
TRAFD1-206ENST00000549358 AKR1C8PQ5T2L2 129 aa6.48□□□□□ -1.37
TRAFD1-206ENST00000549358 OR5A1Q8NGJ0 315 aa6.48□□□□□ -1.37
TRAFD1-206ENST00000549358 MAP1LC3BQ9GZQ8 125 aa6.48□□□□□ -1.37
TRAFD1-206ENST00000549358 MED28Q9H204 178 aa6.48□□□□□ -1.37
TRAFD1-206ENST00000549358 IGLV4-69A0A075B6H9 119 aa6.47□□□□□ -1.37
TRAFD1-206ENST00000549358 A0A087WZ39 114 aa6.47□□□□□ -1.37
TRAFD1-206ENST00000549358 PAGE4O60829 102 aa6.47□□□□□ -1.37
TRAFD1-206ENST00000549358 KRTAP1-4P0C5Y4 121 aa6.47□□□□□ -1.37
TRAFD1-206ENST00000549358 IGLC6P0CF74 106 aa6.47□□□□□ -1.37
TRAFD1-206ENST00000549358 Q6ZNX1 250 aa6.47□□□□□ -1.37
TRAFD1-206ENST00000549358 ISOC2Q96AB3 205 aa6.47□□□□□ -1.37
TRAFD1-206ENST00000549358 BORCS7-ASMTA0A0B4J1R7 106 aa6.46□□□□□ -1.38
TRAFD1-206ENST00000549358 H7C423 109 aa6.46□□□□□ -1.38
TRAFD1-206ENST00000549358 APOMO95445 188 aa6.46□□□□□ -1.38
TRAFD1-206ENST00000549358 TSPAN13O95857 204 aa6.46□□□□□ -1.38
TRAFD1-206ENST00000549358 IFITM3Q01628 133 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms