RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 IGLV4-69A0A075B6H9 119 aa8.2□□□□□ -1.1
LINC00661-204ENST00000549354 IGHV4-4A0A075B6R2 117 aa8.2□□□□□ -1.1
LINC00661-204ENST00000549354 A0A0J9YY99 117 aa8.2□□□□□ -1.1
LINC00661-204ENST00000549354 DEFB131AP59861 70 aa8.2□□□□□ -1.1
LINC00661-204ENST00000549354 CFAP126Q5VTH2 177 aa8.2□□□□□ -1.1
LINC00661-204ENST00000549354 TRAV26-1A0A087WT03 109 aa8.2□□□□□ -1.1
LINC00661-204ENST00000549354 LGALS9O00182 355 aa8.2□□□□□ -1.1
LINC00661-204ENST00000549354 CFC1BP0CG36 223 aa8.2□□□□□ -1.1
LINC00661-204ENST00000549354 CFC1P0CG37 223 aa8.2□□□□□ -1.1
LINC00661-204ENST00000549354 NDUFA11Q86Y39 141 aa8.2□□□□□ -1.1
LINC00661-204ENST00000549354 VWFP04275 2813 aa8.2□□□□□ -1.1
LINC00661-204ENST00000549354 OVOL1O14753 267 aa8.19□□□□□ -1.1
LINC00661-204ENST00000549354 LGALS3P17931 250 aaKnown RBP8.19□□□□□ -1.1
LINC00661-204ENST00000549354 HERVK_113P61574 105 aa8.19□□□□□ -1.1
LINC00661-204ENST00000549354 C1QTNF4Q9BXJ3 329 aa8.19□□□□□ -1.1
LINC00661-204ENST00000549354 NBEAL1Q6ZS30 2694 aa8.19□□□□□ -1.1
LINC00661-204ENST00000549354 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.19□□□□□ -1.1
LINC00661-204ENST00000549354 IGKV2-29A2NJV5 120 aaPredicted RBP8.19□□□□□ -1.1
LINC00661-204ENST00000549354 XGP55808 180 aa8.19□□□□□ -1.1
LINC00661-204ENST00000549354 PMVKQ15126 192 aa8.19□□□□□ -1.1
LINC00661-204ENST00000549354 LENEPQ9Y5L5 61 aa8.19□□□□□ -1.1
LINC00661-204ENST00000549354 A4D1N5 150 aa8.19□□□□□ -1.1
LINC00661-204ENST00000549354 C9JAW5 83 aa8.19□□□□□ -1.1
LINC00661-204ENST00000549354 XCL2Q9UBD3 114 aa8.19□□□□□ -1.1
LINC00661-204ENST00000549354 HIVEP1P15822 2718 aa8.18□□□□□ -1.1
LINC00661-204ENST00000549354 J3QQQ9 107 aa8.18□□□□□ -1.1
LINC00661-204ENST00000549354 SPATA25Q9BR10 227 aa8.18□□□□□ -1.1
LINC00661-204ENST00000549354 CARD19Q96LW7 228 aa8.18□□□□□ -1.1
LINC00661-204ENST00000549354 GEMIN7Q9H840 131 aaKnown RBP8.18□□□□□ -1.1
LINC00661-204ENST00000549354 LINC00315P59091 139 aa8.18□□□□□ -1.1
LINC00661-204ENST00000549354 CDIP1Q9H305 208 aa8.18□□□□□ -1.1
LINC00661-204ENST00000549354 IGHV4OR15-8A0A075B7B6 117 aa8.17□□□□□ -1.1
LINC00661-204ENST00000549354 A0A087WW49 117 aa8.17□□□□□ -1.1
LINC00661-204ENST00000549354 IGIPA6NJ69 53 aa8.17□□□□□ -1.1
LINC00661-204ENST00000549354 VCYO14598 125 aa8.17□□□□□ -1.1
LINC00661-204ENST00000549354 UBE2D1P51668 147 aa8.17□□□□□ -1.1
LINC00661-204ENST00000549354 ANKRD29Q8N6D5 301 aa8.17□□□□□ -1.1
LINC00661-204ENST00000549354 FAM19A4Q96LR4 140 aa8.17□□□□□ -1.1
LINC00661-204ENST00000549354 TRBV7-9A0A0J9YWB2 115 aa8.16□□□□□ -1.1
LINC00661-204ENST00000549354 NDUFA7O95182 113 aa8.16□□□□□ -1.1
LINC00661-204ENST00000549354 ID1P41134 155 aa8.16□□□□□ -1.1
LINC00661-204ENST00000549354 A8MWV9 139 aa8.16□□□□□ -1.1
LINC00661-204ENST00000549354 IGHV3-30P01768 117 aa8.16□□□□□ -1.1
LINC00661-204ENST00000549354 IGHV3-30-5P0DP03 117 aa8.16□□□□□ -1.1
LINC00661-204ENST00000549354 SNRPD3P62318 126 aaKnown RBP8.16□□□□□ -1.1
LINC00661-204ENST00000549354 MUSTN1Q8IVN3 82 aa8.16□□□□□ -1.1
LINC00661-204ENST00000549354 VCX2Q9H322 139 aa8.16□□□□□ -1.1
LINC00661-204ENST00000549354 F8P00451 2351 aa8.16□□□□□ -1.1
LINC00661-204ENST00000549354 DNAJC9-AS1A6NH13 148 aa8.15□□□□□ -1.1
LINC00661-204ENST00000549354 CD28P10747 220 aa8.15□□□□□ -1.1
LINC00661-204ENST00000549354 POLR2KP53803 58 aaKnown RBP8.15□□□□□ -1.1
LINC00661-204ENST00000549354 TCTEX1D4Q5JR98 221 aa8.15□□□□□ -1.1
LINC00661-204ENST00000549354 DCANP1Q8TF63 244 aa8.15□□□□□ -1.1
LINC00661-204ENST00000549354 PRO1854Q9UHT4 67 aa8.15□□□□□ -1.1
LINC00661-204ENST00000549354 KIF25-AS1Q9Y6Z4 181 aa8.15□□□□□ -1.1
LINC00661-204ENST00000549354 Q6ZUT4 128 aa8.15□□□□□ -1.1
LINC00661-204ENST00000549354 LINC01587Q99440 93 aa8.15□□□□□ -1.1
LINC00661-204ENST00000549354 UNC79Q9P2D8 2635 aa8.14□□□□□ -1.11
LINC00661-204ENST00000549354 HOXD3P31249 432 aaPredicted RBP8.14□□□□□ -1.11
LINC00661-204ENST00000549354 C10orf126Q8N4M7 172 aa8.14□□□□□ -1.11
LINC00661-204ENST00000549354 CRYBA4P53673 196 aa8.14□□□□□ -1.11
LINC00661-204ENST00000549354 DGAT2L7PQ6IED9 249 aa8.14□□□□□ -1.11
LINC00661-204ENST00000549354 ESM1Q9NQ30 184 aa8.14□□□□□ -1.11
LINC00661-204ENST00000549354 C4orf3Q8WVX3 66 aa8.14□□□□□ -1.11
LINC00661-204ENST00000549354 TEN1Q86WV5 123 aa8.13□□□□□ -1.11
LINC00661-204ENST00000549354 SLC25A29Q8N8R3 303 aa8.13□□□□□ -1.11
LINC00661-204ENST00000549354 TRAV13-1A0A0B4J241 112 aa8.13□□□□□ -1.11
LINC00661-204ENST00000549354 SLC25A20O43772 301 aa8.13□□□□□ -1.11
LINC00661-204ENST00000549354 UBE2D3P61077 147 aa8.13□□□□□ -1.11
LINC00661-204ENST00000549354 UBE2D2P62837 147 aa8.13□□□□□ -1.11
LINC00661-204ENST00000549354 C16orf95Q9H693 158 aa8.13□□□□□ -1.11
LINC00661-204ENST00000549354 YAE1D1Q9NRH1 226 aa8.13□□□□□ -1.11
LINC00661-204ENST00000549354 TRBV20-1A0A075B6N2 111 aa8.13□□□□□ -1.11
LINC00661-204ENST00000549354 EIF4EBP3O60516 100 aaPredicted RBP8.13□□□□□ -1.11
LINC00661-204ENST00000549354 NTN5Q8WTR8 489 aaPredicted RBP8.13□□□□□ -1.11
LINC00661-204ENST00000549354 PPDPFLQ8WWR9 84 aa8.13□□□□□ -1.11
LINC00661-204ENST00000549354 RNF183Q96D59 192 aa8.13□□□□□ -1.11
LINC00661-204ENST00000549354 C11orf68Q9H3H3 251 aaKnown RBP8.13□□□□□ -1.11
LINC00661-204ENST00000549354 C3orf56Q8N813 242 aa8.12□□□□□ -1.11
LINC00661-204ENST00000549354 ERG28Q9UKR5 140 aa8.12□□□□□ -1.11
LINC00661-204ENST00000549354 PPP1R17O96001 155 aa8.12□□□□□ -1.11
LINC00661-204ENST00000549354 RNASE1P07998 156 aaKnown RBP8.12□□□□□ -1.11
LINC00661-204ENST00000549354 TNFRSF18Q9Y5U5 241 aa8.12□□□□□ -1.11
LINC00661-204ENST00000549354 IGHV1OR15-1A0A075B7D0 117 aa8.11□□□□□ -1.11
LINC00661-204ENST00000549354 TEX49A0A1B0GTD5 131 aa8.11□□□□□ -1.11
LINC00661-204ENST00000549354 RBMY1A1P0DJD3 496 aaKnown RBP8.11□□□□□ -1.11
LINC00661-204ENST00000549354 RBMY1CP0DJD4 496 aa8.11□□□□□ -1.11
LINC00661-204ENST00000549354 RBMY1FQ15415 496 aaKnown RBP8.11□□□□□ -1.11
LINC00661-204ENST00000549354 Q6ZSN1 163 aa8.11□□□□□ -1.11
LINC00661-204ENST00000549354 DYNLRB2Q8TF09 96 aa8.11□□□□□ -1.11
LINC00661-204ENST00000549354 K7EQG2 157 aa8.11□□□□□ -1.11
LINC00661-204ENST00000549354 M0QY20 66 aa8.11□□□□□ -1.11
LINC00661-204ENST00000549354 WFDC10AQ9H1F0 79 aa8.11□□□□□ -1.11
LINC00661-204ENST00000549354 KLLNB2CW77 178 aa8.11□□□□□ -1.11
LINC00661-204ENST00000549354 NOTCH1P46531 2555 aa8.11□□□□□ -1.11
LINC00661-204ENST00000549354 LINC01619G3V211 115 aa8.1□□□□□ -1.11
LINC00661-204ENST00000549354 TMEM61Q8N0U2 210 aa8.1□□□□□ -1.11
LINC00661-204ENST00000549354 ODF3Q96PU9 254 aa8.1□□□□□ -1.11
LINC00661-204ENST00000549354 TOMM7Q9P0U1 55 aa8.1□□□□□ -1.11
LINC00661-204ENST00000549354 ZNF22P17026 224 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms