RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 LELP1Q5T871 98 aa6.79□□□□□ -1.32
SMARCD1-206ENST00000549274 UBE2DNLQ8IWF7 75 aa6.79□□□□□ -1.32
SMARCD1-206ENST00000549274 NRACQ8N912 160 aa6.79□□□□□ -1.32
SMARCD1-206ENST00000549274 TMEM18Q96B42 140 aa6.79□□□□□ -1.32
SMARCD1-206ENST00000549274 RPL39LQ96EH5 51 aaKnown RBP6.79□□□□□ -1.32
SMARCD1-206ENST00000549274 TMEM70Q9BUB7 260 aa6.79□□□□□ -1.32
SMARCD1-206ENST00000549274 SMIM2Q9BVW6 85 aa6.79□□□□□ -1.32
SMARCD1-206ENST00000549274 IGHV1-24A0A0C4DH33 117 aa6.78□□□□□ -1.32
SMARCD1-206ENST00000549274 LOC100131303A0A0U1RQF7 123 aa6.78□□□□□ -1.32
SMARCD1-206ENST00000549274 SCO1O75880 301 aa6.78□□□□□ -1.32
SMARCD1-206ENST00000549274 FCER1GP30273 86 aa6.78□□□□□ -1.32
SMARCD1-206ENST00000549274 POLR2KP53803 58 aaKnown RBP6.78□□□□□ -1.32
SMARCD1-206ENST00000549274 CHCHD7Q9BUK0 85 aa6.78□□□□□ -1.32
SMARCD1-206ENST00000549274 MRPS16Q9Y3D3 137 aaKnown RBP6.78□□□□□ -1.32
SMARCD1-206ENST00000549274 TRBV6-8A0A0A6YYG3 113 aa6.77□□□□□ -1.33
SMARCD1-206ENST00000549274 SMKR1H3BMG3 65 aa6.77□□□□□ -1.33
SMARCD1-206ENST00000549274 H7C423 109 aa6.77□□□□□ -1.33
SMARCD1-206ENST00000549274 NPYP01303 97 aa6.77□□□□□ -1.33
SMARCD1-206ENST00000549274 LGALS9CQ6DKI2 356 aa6.77□□□□□ -1.33
SMARCD1-206ENST00000549274 LYPD5Q6UWN5 251 aa6.77□□□□□ -1.33
SMARCD1-206ENST00000549274 ALKBH7Q9BT30 221 aaPredicted RBP6.77□□□□□ -1.33
SMARCD1-206ENST00000549274 UPK3BQ9BT76 320 aa6.77□□□□□ -1.33
SMARCD1-206ENST00000549274 CSMD3Q7Z407 3707 aa6.76□□□□□ -1.33
SMARCD1-206ENST00000549274 UBE2L6O14933 153 aa6.76□□□□□ -1.33
SMARCD1-206ENST00000549274 AMTP48728 403 aa6.76□□□□□ -1.33
SMARCD1-206ENST00000549274 IQCJQ1A5X6 159 aa6.76□□□□□ -1.33
SMARCD1-206ENST00000549274 KIAA1644Q3SXP7 199 aa6.76□□□□□ -1.33
SMARCD1-206ENST00000549274 ORMDL2Q53FV1 153 aa6.76□□□□□ -1.33
SMARCD1-206ENST00000549274 Q8N8P6 123 aa6.76□□□□□ -1.33
SMARCD1-206ENST00000549274 PRSS3P2Q8NHM4 247 aa6.76□□□□□ -1.33
SMARCD1-206ENST00000549274 TMEM243Q9BU79 118 aa6.76□□□□□ -1.33
SMARCD1-206ENST00000549274 STARD9Q9P2P6 4700 aa6.76□□□□□ -1.33
SMARCD1-206ENST00000549274 TRAV9-2A0A087WT02 112 aa6.75□□□□□ -1.33
SMARCD1-206ENST00000549274 TRGC2P03986 189 aa6.75□□□□□ -1.33
SMARCD1-206ENST00000549274 MALP21145 153 aa6.75□□□□□ -1.33
SMARCD1-206ENST00000549274 TTC32Q5I0X7 151 aa6.75□□□□□ -1.33
SMARCD1-206ENST00000549274 FA2HQ7L5A8 372 aa6.75□□□□□ -1.33
SMARCD1-206ENST00000549274 C10orf126Q8N4M7 172 aa6.75□□□□□ -1.33
SMARCD1-206ENST00000549274 C1orf196B1AJZ1 125 aa6.74□□□□□ -1.33
SMARCD1-206ENST00000549274 ZNF25P17030 456 aaPredicted RBP6.74□□□□□ -1.33
SMARCD1-206ENST00000549274 ESRGQ1W209 222 aa6.74□□□□□ -1.33
SMARCD1-206ENST00000549274 PLECQ15149 4684 aaKnown RBP6.74□□□□□ -1.33
SMARCD1-206ENST00000549274 A0A087WX48 190 aa6.73□□□□□ -1.33
SMARCD1-206ENST00000549274 IGHV3-38A0A0C4DH36 116 aa6.73□□□□□ -1.33
SMARCD1-206ENST00000549274 LOC389332A0A1B0GUA5 103 aa6.73□□□□□ -1.33
SMARCD1-206ENST00000549274 SIVA1O15304 175 aa6.73□□□□□ -1.33
SMARCD1-206ENST00000549274 BTF3P20290 206 aaKnown RBP6.73□□□□□ -1.33
SMARCD1-206ENST00000549274 Q0VG73 95 aa6.73□□□□□ -1.33
SMARCD1-206ENST00000549274 LAGE3Q14657 143 aa6.73□□□□□ -1.33
SMARCD1-206ENST00000549274 CDPF1Q6NVV7 123 aa6.73□□□□□ -1.33
SMARCD1-206ENST00000549274 C18orf32Q8TCD1 76 aa6.73□□□□□ -1.33
SMARCD1-206ENST00000549274 CHCHD1Q96BP2 118 aaKnown RBP6.73□□□□□ -1.33
SMARCD1-206ENST00000549274 CHCHD5Q9BSY4 110 aa6.73□□□□□ -1.33
SMARCD1-206ENST00000549274 Q9UF83 564 aa6.73□□□□□ -1.33
SMARCD1-206ENST00000549274 LINC01546A6NGU7 62 aa6.72□□□□□ -1.33
SMARCD1-206ENST00000549274 GAS8-AS1O95177 125 aa6.72□□□□□ -1.33
SMARCD1-206ENST00000549274 TSHBP01222 138 aa6.72□□□□□ -1.33
SMARCD1-206ENST00000549274 NPSP0C0P6 89 aa6.72□□□□□ -1.33
SMARCD1-206ENST00000549274 LINC00614P0C842 121 aa6.72□□□□□ -1.33
SMARCD1-206ENST00000549274 LINC01556Q5JQF7 62 aa6.72□□□□□ -1.33
SMARCD1-206ENST00000549274 PAPPA-AS1Q5QFB9 102 aa6.72□□□□□ -1.33
SMARCD1-206ENST00000549274 AMMECR1LQ6DCA0 310 aa6.72□□□□□ -1.33
SMARCD1-206ENST00000549274 BAGE3Q86Y29 109 aa6.72□□□□□ -1.33
SMARCD1-206ENST00000549274 TMEM101Q96IK0 257 aa6.72□□□□□ -1.33
SMARCD1-206ENST00000549274 CYSLTR1Q9Y271 337 aa6.72□□□□□ -1.33
SMARCD1-206ENST00000549274 LINC00588Q9Y4M8 146 aa6.72□□□□□ -1.33
SMARCD1-206ENST00000549274 TENM2Q9NT68 2774 aa6.71□□□□□ -1.33
SMARCD1-206ENST00000549274 IGLV2-18A0A075B6J9 118 aa6.71□□□□□ -1.34
SMARCD1-206ENST00000549274 A0A1B0GUV1 79 aa6.71□□□□□ -1.34
SMARCD1-206ENST00000549274 TMEM262E9PQX1 116 aa6.71□□□□□ -1.34
SMARCD1-206ENST00000549274 DNAH10OSP0CZ25 163 aa6.71□□□□□ -1.34
SMARCD1-206ENST00000549274 ESDP10768 282 aa6.71□□□□□ -1.34
SMARCD1-206ENST00000549274 IFI27P40305 119 aaPredicted RBP6.71□□□□□ -1.34
SMARCD1-206ENST00000549274 XP32Q5T750 250 aa6.71□□□□□ -1.34
SMARCD1-206ENST00000549274 LINC00476Q8WZB0 136 aa6.71□□□□□ -1.34
SMARCD1-206ENST00000549274 TIMM21Q9BVV7 248 aa6.71□□□□□ -1.34
SMARCD1-206ENST00000549274 SPANXA1Q9NS26 97 aa6.71□□□□□ -1.34
SMARCD1-206ENST00000549274 CSDC2Q9Y534 153 aaKnown RBP6.71□□□□□ -1.34
SMARCD1-206ENST00000549274 ALMS1Q8TCU4 4167 aa6.7□□□□□ -1.34
SMARCD1-206ENST00000549274 DGAT2L7PQ6IED9 249 aa6.7□□□□□ -1.34
SMARCD1-206ENST00000549274 NTM-AS1Q6ZSK4 140 aa6.7□□□□□ -1.34
SMARCD1-206ENST00000549274 MRPL52Q86TS9 123 aaKnown RBP6.7□□□□□ -1.34
SMARCD1-206ENST00000549274 NIT1Q86X76 327 aa6.7□□□□□ -1.34
SMARCD1-206ENST00000549274 C20orf203Q8NBC4 194 aa6.7□□□□□ -1.34
SMARCD1-206ENST00000549274 Q9H8V8 135 aa6.7□□□□□ -1.34
SMARCD1-206ENST00000549274 HSBP1O75506 76 aa6.69□□□□□ -1.34
SMARCD1-206ENST00000549274 LY6G6CO95867 125 aa6.69□□□□□ -1.34
SMARCD1-206ENST00000549274 RNASEKQ6P5S7 137 aaKnown RBP6.69□□□□□ -1.34
SMARCD1-206ENST00000549274 Q6ZN92 141 aa6.69□□□□□ -1.34
SMARCD1-206ENST00000549274 OR5A1Q8NGJ0 315 aa6.69□□□□□ -1.34
SMARCD1-206ENST00000549274 PYGO1Q9Y3Y4 419 aa6.69□□□□□ -1.34
SMARCD1-206ENST00000549274 HIST1H2BKO60814 126 aa6.68□□□□□ -1.34
SMARCD1-206ENST00000549274 HBDP02042 147 aa6.68□□□□□ -1.34
SMARCD1-206ENST00000549274 CRPP02741 224 aa6.68□□□□□ -1.34
SMARCD1-206ENST00000549274 HIST1H2BJP06899 126 aa6.68□□□□□ -1.34
SMARCD1-206ENST00000549274 HIST1H2BOP23527 126 aa6.68□□□□□ -1.34
SMARCD1-206ENST00000549274 HIST1H2BBP33778 126 aa6.68□□□□□ -1.34
SMARCD1-206ENST00000549274 HIST1H2BDP58876 126 aa6.68□□□□□ -1.34
SMARCD1-206ENST00000549274 HIST1H2BCP62807 126 aa6.68□□□□□ -1.34
SMARCD1-206ENST00000549274 HIST2H2BEQ16778 126 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms