RNA–Protein interactions for RNA: ENST00000549107.5

PTPRR-208, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-208ENST00000549107 DKK2Q9UBU2 259 aa7.96□□□□□ -1.14
PTPRR-208ENST00000549107 TRBV7-3A0A075B6L6 115 aa7.95□□□□□ -1.14
PTPRR-208ENST00000549107 TRAV9-2A0A087WT02 112 aa7.95□□□□□ -1.14
PTPRR-208ENST00000549107 IGHV3-38A0A0C4DH36 116 aa7.95□□□□□ -1.14
PTPRR-208ENST00000549107 GAGE12JA6NER3 117 aa7.95□□□□□ -1.14
PTPRR-208ENST00000549107 TSTD3H0UI37 97 aa7.95□□□□□ -1.14
PTPRR-208ENST00000549107 RPL39P62891 51 aaKnown RBP7.95□□□□□ -1.14
PTPRR-208ENST00000549107 GAGE1Q13065 139 aa7.95□□□□□ -1.14
PTPRR-208ENST00000549107 GAGE4Q13068 117 aa7.95□□□□□ -1.14
PTPRR-208ENST00000549107 GAGE5Q13069 117 aa7.95□□□□□ -1.14
PTPRR-208ENST00000549107 ODF1Q14990 250 aa7.95□□□□□ -1.14
PTPRR-208ENST00000549107 MAJINQ3KP22 176 aa7.95□□□□□ -1.14
PTPRR-208ENST00000549107 GAGE13Q4V321 117 aa7.95□□□□□ -1.14
PTPRR-208ENST00000549107 Q6ZN92 141 aa7.95□□□□□ -1.14
PTPRR-208ENST00000549107 C20orf203Q8NBC4 194 aa7.95□□□□□ -1.14
PTPRR-208ENST00000549107 PHLDA1Q8WV24 401 aaPredicted RBP7.95□□□□□ -1.14
PTPRR-208ENST00000549107 RETNQ9HD89 108 aa7.95□□□□□ -1.14
PTPRR-208ENST00000549107 IGIPA6NJ69 53 aa7.94□□□□□ -1.14
PTPRR-208ENST00000549107 UBE2D3P61077 147 aa7.94□□□□□ -1.14
PTPRR-208ENST00000549107 UBE2D2P62837 147 aa7.94□□□□□ -1.14
PTPRR-208ENST00000549107 COTL1Q14019 142 aa7.94□□□□□ -1.14
PTPRR-208ENST00000549107 SPATA45Q537H7 98 aa7.94□□□□□ -1.14
PTPRR-208ENST00000549107 TMEM141Q96I45 108 aa7.94□□□□□ -1.14
PTPRR-208ENST00000549107 TIMM17AQ99595 171 aa7.94□□□□□ -1.14
PTPRR-208ENST00000549107 ZMAT4Q9H898 229 aa7.94□□□□□ -1.14
PTPRR-208ENST00000549107 CELA1Q9UNI1 258 aa7.94□□□□□ -1.14
PTPRR-208ENST00000549107 TRAV12-1A0A0B4J245 112 aa7.93□□□□□ -1.14
PTPRR-208ENST00000549107 LOC100131303A0A0U1RQF7 123 aa7.93□□□□□ -1.14
PTPRR-208ENST00000549107 hDV102S1A0JD36 115 aa7.93□□□□□ -1.14
PTPRR-208ENST00000549107 SPART-AS1P0CW21 52 aa7.93□□□□□ -1.14
PTPRR-208ENST00000549107 DAD1P61803 113 aa7.93□□□□□ -1.14
PTPRR-208ENST00000549107 KPRPQ5T749 579 aaPredicted RBP7.93□□□□□ -1.14
PTPRR-208ENST00000549107 DAZ4Q86SG3 579 aaKnown RBP7.93□□□□□ -1.14
PTPRR-208ENST00000549107 BAALCQ8WXS3 180 aa7.93□□□□□ -1.14
PTPRR-208ENST00000549107 PRADC1Q9BSG0 188 aa7.93□□□□□ -1.14
PTPRR-208ENST00000549107 CHCHD7Q9BUK0 85 aa7.93□□□□□ -1.14
PTPRR-208ENST00000549107 DAZ3Q9NR90 486 aaKnown RBP7.93□□□□□ -1.14
PTPRR-208ENST00000549107 NBEAL2Q6ZNJ1 2754 aa7.92□□□□□ -1.14
PTPRR-208ENST00000549107 A0A087WX48 190 aa7.92□□□□□ -1.14
PTPRR-208ENST00000549107 PRB2P02812 416 aaPredicted RBP7.92□□□□□ -1.14
PTPRR-208ENST00000549107 LCE2CQ5TA81 110 aa7.92□□□□□ -1.14
PTPRR-208ENST00000549107 HHLA3Q9XRX5 114 aa7.92□□□□□ -1.14
PTPRR-208ENST00000549107 HSBP1L1C9JCN9 74 aa7.91□□□□□ -1.14
PTPRR-208ENST00000549107 K7EIL1 84 aa7.91□□□□□ -1.14
PTPRR-208ENST00000549107 LINC00694P0DN24 101 aa7.91□□□□□ -1.14
PTPRR-208ENST00000549107 CRYBA4P53673 196 aa7.91□□□□□ -1.14
PTPRR-208ENST00000549107 MRPL35Q9NZE8 188 aaKnown RBP7.91□□□□□ -1.14
PTPRR-208ENST00000549107 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.9□□□□□ -1.14
PTPRR-208ENST00000549107 TEX48A0A1B0GUV7 120 aa7.9□□□□□ -1.14
PTPRR-208ENST00000549107 IGKV2-29A2NJV5 120 aaPredicted RBP7.9□□□□□ -1.14
PTPRR-208ENST00000549107 PRSS29PA6NIE9 313 aa7.9□□□□□ -1.14
PTPRR-208ENST00000549107 F8VRH5 84 aa7.9□□□□□ -1.14
PTPRR-208ENST00000549107 DPM2O94777 84 aa7.9□□□□□ -1.14
PTPRR-208ENST00000549107 IGKCP01834 107 aa7.9□□□□□ -1.14
PTPRR-208ENST00000549107 DDTP30046 118 aa7.9□□□□□ -1.14
PTPRR-208ENST00000549107 PRO0255Q9UI72 69 aa7.9□□□□□ -1.14
PTPRR-208ENST00000549107 CHTOPQ9Y3Y2 248 aaKnown RBP7.9□□□□□ -1.14
PTPRR-208ENST00000549107 PYGO1Q9Y3Y4 419 aa7.9□□□□□ -1.14
PTPRR-208ENST00000549107 IGLV4-3A0A075B6K6 122 aa7.89□□□□□ -1.15
PTPRR-208ENST00000549107 LINC00587B1AMM8 73 aa7.89□□□□□ -1.15
PTPRR-208ENST00000549107 ATP5G1P05496 136 aa7.89□□□□□ -1.15
PTPRR-208ENST00000549107 PMVKQ15126 192 aa7.89□□□□□ -1.15
PTPRR-208ENST00000549107 NTM-AS1Q6ZSK4 140 aa7.89□□□□□ -1.15
PTPRR-208ENST00000549107 OPRPNQ99935 248 aaPredicted RBP7.89□□□□□ -1.15
PTPRR-208ENST00000549107 GTSF1LQ9H1H1 148 aa7.89□□□□□ -1.15
PTPRR-208ENST00000549107 C11orf68Q9H3H3 251 aaKnown RBP7.89□□□□□ -1.15
PTPRR-208ENST00000549107 SPANXA1Q9NS26 97 aa7.89□□□□□ -1.15
PTPRR-208ENST00000549107 NPSP0C0P6 89 aa7.88□□□□□ -1.15
PTPRR-208ENST00000549107 IGLC3P0DOY3 106 aa7.88□□□□□ -1.15
PTPRR-208ENST00000549107 GYPEP15421 78 aa7.88□□□□□ -1.15
PTPRR-208ENST00000549107 PLNP26678 52 aa7.88□□□□□ -1.15
PTPRR-208ENST00000549107 ANKRD39Q53RE8 183 aa7.88□□□□□ -1.15
PTPRR-208ENST00000549107 ZC2HC1BQ5TFG8 222 aa7.88□□□□□ -1.15
PTPRR-208ENST00000549107 SBSPONQ8IVN8 264 aa7.88□□□□□ -1.15
PTPRR-208ENST00000549107 STPG4Q8N801 248 aa7.88□□□□□ -1.15
PTPRR-208ENST00000549107 MIEN1Q9BRT3 115 aa7.88□□□□□ -1.15
PTPRR-208ENST00000549107 CST9LQ9H4G1 147 aa7.88□□□□□ -1.15
PTPRR-208ENST00000549107 UBE2D4Q9Y2X8 147 aa7.88□□□□□ -1.15
PTPRR-208ENST00000549107 PAX4O43316 350 aa7.87□□□□□ -1.15
PTPRR-208ENST00000549107 CEMP1Q6PRD7 247 aaPredicted RBP7.87□□□□□ -1.15
PTPRR-208ENST00000549107 FAM104AQ969W3 186 aa7.87□□□□□ -1.15
PTPRR-208ENST00000549107 UQCR10Q9UDW1 63 aa7.87□□□□□ -1.15
PTPRR-208ENST00000549107 IGLV4-69A0A075B6H9 119 aa7.86□□□□□ -1.15
PTPRR-208ENST00000549107 F5H768 121 aa7.86□□□□□ -1.15
PTPRR-208ENST00000549107 HTN3P15516 51 aa7.86□□□□□ -1.15
PTPRR-208ENST00000549107 C12orf74Q32Q52 190 aa7.86□□□□□ -1.15
PTPRR-208ENST00000549107 PAPPA-AS1Q5QFB9 102 aa7.86□□□□□ -1.15
PTPRR-208ENST00000549107 C14orf144Q96I85 54 aa7.86□□□□□ -1.15
PTPRR-208ENST00000549107 VSIG2Q96IQ7 327 aa7.86□□□□□ -1.15
PTPRR-208ENST00000549107 SPATA25Q9BR10 227 aa7.86□□□□□ -1.15
PTPRR-208ENST00000549107 TMEM243Q9BU79 118 aa7.86□□□□□ -1.15
PTPRR-208ENST00000549107 TIMM21Q9BVV7 248 aa7.86□□□□□ -1.15
PTPRR-208ENST00000549107 VCX2Q9H322 139 aa7.86□□□□□ -1.15
PTPRR-208ENST00000549107 NOTCH1P46531 2555 aa7.86□□□□□ -1.15
PTPRR-208ENST00000549107 TRBV25-1A0A075B6N4 114 aa7.85□□□□□ -1.15
PTPRR-208ENST00000549107 A0A0J9YWU9 116 aa7.85□□□□□ -1.15
PTPRR-208ENST00000549107 A0A0J9YY99 117 aa7.85□□□□□ -1.15
PTPRR-208ENST00000549107 TCTAP57738 103 aa7.85□□□□□ -1.15
PTPRR-208ENST00000549107 TMEM97Q5BJF2 176 aa7.85□□□□□ -1.15
PTPRR-208ENST00000549107 DEFB121Q5J5C9 76 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms