RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 TRAV8-4A0A0B4J246 113 aa7.46□□□□□ -1.22
BEST3-209ENST00000548658 UBE2L6O14933 153 aa7.46□□□□□ -1.22
BEST3-209ENST00000548658 GATCO43716 136 aaKnown RBP7.46□□□□□ -1.22
BEST3-209ENST00000548658 COTL1Q14019 142 aa7.46□□□□□ -1.22
BEST3-209ENST00000548658 CT83Q5H943 113 aa7.46□□□□□ -1.22
BEST3-209ENST00000548658 BORCS7Q96B45 105 aa7.46□□□□□ -1.22
BEST3-209ENST00000548658 HLA-DQA1P01909 254 aa7.45□□□□□ -1.22
BEST3-209ENST00000548658 PLA2G1BP04054 148 aaKnown RBP7.45□□□□□ -1.22
BEST3-209ENST00000548658 CEBPGP53567 150 aa7.45□□□□□ -1.22
BEST3-209ENST00000548658 FOXA3P55318 350 aaPredicted RBP7.45□□□□□ -1.22
BEST3-209ENST00000548658 REG3AQ06141 175 aa7.45□□□□□ -1.22
BEST3-209ENST00000548658 DGAT2L7PQ6IED9 249 aa7.45□□□□□ -1.22
BEST3-209ENST00000548658 CLRN3Q8NCR9 226 aa7.45□□□□□ -1.22
BEST3-209ENST00000548658 GTSF1Q8WW33 167 aa7.45□□□□□ -1.22
BEST3-209ENST00000548658 USP17L23D6RBM5 183 aa7.44□□□□□ -1.22
BEST3-209ENST00000548658 EIF4EBP3O60516 100 aaPredicted RBP7.44□□□□□ -1.22
BEST3-209ENST00000548658 HAMPP81172 84 aa7.44□□□□□ -1.22
BEST3-209ENST00000548658 FAM210AQ96ND0 272 aa7.44□□□□□ -1.22
BEST3-209ENST00000548658 SMIM7Q9BQ49 75 aa7.44□□□□□ -1.22
BEST3-209ENST00000548658 FAM231BA6NCW3 169 aa7.43□□□□□ -1.22
BEST3-209ENST00000548658 ZNF727A8MUV8 499 aa7.43□□□□□ -1.22
BEST3-209ENST00000548658 NCR2O95944 276 aa7.43□□□□□ -1.22
BEST3-209ENST00000548658 AMTP48728 403 aa7.43□□□□□ -1.22
BEST3-209ENST00000548658 GATD1Q8NB37 220 aa7.43□□□□□ -1.22
BEST3-209ENST00000548658 CHAC1Q9BUX1 264 aa7.43□□□□□ -1.22
BEST3-209ENST00000548658 GFRA4Q9GZZ7 299 aa7.43□□□□□ -1.22
BEST3-209ENST00000548658 FAT1Q14517 4588 aa7.42□□□□□ -1.22
BEST3-209ENST00000548658 H7C423 109 aa7.42□□□□□ -1.22
BEST3-209ENST00000548658 LINC01620Q4KN68 170 aa7.42□□□□□ -1.22
BEST3-209ENST00000548658 CLPSL2Q6UWE3 100 aa7.42□□□□□ -1.22
BEST3-209ENST00000548658 LINC01551Q86U37 167 aa7.42□□□□□ -1.22
BEST3-209ENST00000548658 C20orf203Q8NBC4 194 aa7.42□□□□□ -1.22
BEST3-209ENST00000548658 TSKUQ8WUA8 353 aa7.42□□□□□ -1.22
BEST3-209ENST00000548658 TRAV26-2A0A0B4J265 109 aa7.41□□□□□ -1.22
BEST3-209ENST00000548658 A0A1B0GUT8 65 aa7.41□□□□□ -1.22
BEST3-209ENST00000548658 FAM74A3Q4VXF1 159 aa7.41□□□□□ -1.22
BEST3-209ENST00000548658 SCXQ7RTU7 201 aa7.41□□□□□ -1.22
BEST3-209ENST00000548658 OSTCQ9NRP0 149 aa7.41□□□□□ -1.22
BEST3-209ENST00000548658 IGLV4-60A0A075B6I1 120 aa7.4□□□□□ -1.22
BEST3-209ENST00000548658 IGLV10-54A0A075B6I4 117 aa7.4□□□□□ -1.22
BEST3-209ENST00000548658 HIGD1CA8MV81 97 aa7.4□□□□□ -1.22
BEST3-209ENST00000548658 APCSP02743 223 aa7.4□□□□□ -1.22
BEST3-209ENST00000548658 PRSS1P07477 247 aa7.4□□□□□ -1.22
BEST3-209ENST00000548658 AMMECR1LQ6DCA0 310 aa7.4□□□□□ -1.22
BEST3-209ENST00000548658 KRTAP26-1Q6PEX3 210 aa7.4□□□□□ -1.22
BEST3-209ENST00000548658 C9orf163Q8N9P6 203 aa7.4□□□□□ -1.22
BEST3-209ENST00000548658 TRBV6-5A0A0K0K1A5 114 aa7.39□□□□□ -1.23
BEST3-209ENST00000548658 SDHAF1A6NFY7 115 aa7.39□□□□□ -1.23
BEST3-209ENST00000548658 I3L3M4 83 aa7.39□□□□□ -1.23
BEST3-209ENST00000548658 SRP19P09132 144 aaKnown RBP7.39□□□□□ -1.23
BEST3-209ENST00000548658 TMEM241Q24JQ0 296 aa7.39□□□□□ -1.23
BEST3-209ENST00000548658 RPL39LQ96EH5 51 aaKnown RBP7.39□□□□□ -1.23
BEST3-209ENST00000548658 TMEM191AQ9H0A3 160 aa7.39□□□□□ -1.23
BEST3-209ENST00000548658 SMDT1Q9H4I9 107 aa7.39□□□□□ -1.23
BEST3-209ENST00000548658 AP5S1Q9NUS5 200 aa7.39□□□□□ -1.23
BEST3-209ENST00000548658 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.38□□□□□ -1.23
BEST3-209ENST00000548658 ZNF25P17030 456 aaPredicted RBP7.38□□□□□ -1.23
BEST3-209ENST00000548658 PMCHP20382 165 aa7.38□□□□□ -1.23
BEST3-209ENST00000548658 RIGQ13278 110 aa7.38□□□□□ -1.23
BEST3-209ENST00000548658 CFAP161Q6P656 301 aa7.38□□□□□ -1.23
BEST3-209ENST00000548658 CIRBP-AS1Q8TBR5 109 aa7.38□□□□□ -1.23
BEST3-209ENST00000548658 DEFB104AQ8WTQ1 72 aa7.38□□□□□ -1.23
BEST3-209ENST00000548658 BTF3L4Q96K17 158 aa7.38□□□□□ -1.23
BEST3-209ENST00000548658 ST20Q9HBF5 79 aa7.38□□□□□ -1.23
BEST3-209ENST00000548658 hDV102S1A0JD36 115 aa7.37□□□□□ -1.23
BEST3-209ENST00000548658 PPP1R17O96001 155 aa7.37□□□□□ -1.23
BEST3-209ENST00000548658 CNBPP62633 177 aaKnown RBP7.37□□□□□ -1.23
BEST3-209ENST00000548658 PEA15Q15121 130 aa7.37□□□□□ -1.23
BEST3-209ENST00000548658 RNASEKQ6P5S7 137 aaKnown RBP7.37□□□□□ -1.23
BEST3-209ENST00000548658 MRAP2Q96G30 205 aa7.37□□□□□ -1.23
BEST3-209ENST00000548658 SRRM2Q9UQ35 2752 aaKnown RBP7.37□□□□□ -1.23
BEST3-209ENST00000548658 DNAH8Q96JB1 4490 aa7.37□□□□□ -1.23
BEST3-209ENST00000548658 A0A1B0GVG6 124 aa7.36□□□□□ -1.23
BEST3-209ENST00000548658 FGF6P10767 208 aa7.36□□□□□ -1.23
BEST3-209ENST00000548658 TMEM101Q96IK0 257 aa7.36□□□□□ -1.23
BEST3-209ENST00000548658 NAT8BQ9UHF3 227 aa7.36□□□□□ -1.23
BEST3-209ENST00000548658 LOC100996750A0A140TA64 210 aa7.35□□□□□ -1.23
BEST3-209ENST00000548658 RAB4AP20338 218 aa7.35□□□□□ -1.23
BEST3-209ENST00000548658 SDIM1Q6ZPB5 146 aa7.35□□□□□ -1.23
BEST3-209ENST00000548658 NUP35Q8NFH5 326 aa7.35□□□□□ -1.23
BEST3-209ENST00000548658 ISOC2Q96AB3 205 aa7.35□□□□□ -1.23
BEST3-209ENST00000548658 KRTAP4-6Q9BYQ5 205 aa7.35□□□□□ -1.23
BEST3-209ENST00000548658 NAT8Q9UHE5 227 aa7.35□□□□□ -1.23
BEST3-209ENST00000548658 V9GYV3 84 aa7.35□□□□□ -1.23
BEST3-209ENST00000548658 VPS13BQ7Z7G8 4022 aa7.34□□□□□ -1.23
BEST3-209ENST00000548658 IGHV3-64A0A075B6Q5 118 aa7.34□□□□□ -1.23
BEST3-209ENST00000548658 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.34□□□□□ -1.23
BEST3-209ENST00000548658 IGKV3OR2-268A0A0C4DH90 116 aa7.34□□□□□ -1.23
BEST3-209ENST00000548658 TRBV27A0A0K0K1C4 114 aa7.34□□□□□ -1.23
BEST3-209ENST00000548658 IGKV2-29A2NJV5 120 aaPredicted RBP7.34□□□□□ -1.23
BEST3-209ENST00000548658 GAGE12HA6NDE8 117 aa7.34□□□□□ -1.23
BEST3-209ENST00000548658 VCYO14598 125 aa7.34□□□□□ -1.23
BEST3-209ENST00000548658 ESDP10768 282 aa7.34□□□□□ -1.23
BEST3-209ENST00000548658 POLR2KP53803 58 aaKnown RBP7.34□□□□□ -1.23
BEST3-209ENST00000548658 RPL23P62829 140 aaKnown RBP7.34□□□□□ -1.23
BEST3-209ENST00000548658 SMAGPQ0VAQ4 97 aa7.34□□□□□ -1.23
BEST3-209ENST00000548658 AMN1Q8IY45 258 aa7.34□□□□□ -1.23
BEST3-209ENST00000548658 OR5A1Q8NGJ0 315 aa7.34□□□□□ -1.23
BEST3-209ENST00000548658 CHCHD10Q8WYQ3 142 aaPredicted RBP7.34□□□□□ -1.23
BEST3-209ENST00000548658 FLG2Q5D862 2391 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms