RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 ZNF415Q09FC8 603 aa7.2□□□□□ -1.26
SMARCD1-205ENST00000548573 DNAJC30Q96LL9 226 aa7.2□□□□□ -1.26
SMARCD1-205ENST00000548573 CLUHP3Q96NS8 147 aa7.2□□□□□ -1.26
SMARCD1-205ENST00000548573 DUX5Q96PT3 197 aa7.2□□□□□ -1.26
SMARCD1-205ENST00000548573 ANAPC13Q9BS18 74 aa7.2□□□□□ -1.26
SMARCD1-205ENST00000548573 BEX4Q9NWD9 120 aaPredicted RBP7.2□□□□□ -1.26
SMARCD1-205ENST00000548573 KNCNA6PVL3 124 aa7.19□□□□□ -1.26
SMARCD1-205ENST00000548573 H3BMM0 161 aa7.19□□□□□ -1.26
SMARCD1-205ENST00000548573 SNCGO76070 127 aa7.19□□□□□ -1.26
SMARCD1-205ENST00000548573 IFITM1P13164 125 aa7.19□□□□□ -1.26
SMARCD1-205ENST00000548573 HTN1P15515 57 aa7.19□□□□□ -1.26
SMARCD1-205ENST00000548573 UBE2WQ96B02 151 aa7.19□□□□□ -1.26
SMARCD1-205ENST00000548573 DUX3Q96PT4 197 aa7.19□□□□□ -1.26
SMARCD1-205ENST00000548573 TRAV8-4A0A0B4J246 113 aa7.18□□□□□ -1.26
SMARCD1-205ENST00000548573 TEX49A0A1B0GTD5 131 aa7.18□□□□□ -1.26
SMARCD1-205ENST00000548573 J3QLI3 93 aa7.18□□□□□ -1.26
SMARCD1-205ENST00000548573 DEFB131AP59861 70 aa7.18□□□□□ -1.26
SMARCD1-205ENST00000548573 GAGE2BQ13066 116 aa7.18□□□□□ -1.26
SMARCD1-205ENST00000548573 GAGE2EQ4V326 116 aa7.18□□□□□ -1.26
SMARCD1-205ENST00000548573 RNASE13Q5GAN3 156 aaKnown RBP7.18□□□□□ -1.26
SMARCD1-205ENST00000548573 Q6Q795 121 aa7.18□□□□□ -1.26
SMARCD1-205ENST00000548573 C2orf82Q6UX34 121 aa7.18□□□□□ -1.26
SMARCD1-205ENST00000548573 TMEM61Q8N0U2 210 aa7.18□□□□□ -1.26
SMARCD1-205ENST00000548573 LINC01356Q8N9X3 169 aa7.18□□□□□ -1.26
SMARCD1-205ENST00000548573 LINC00467Q9BRT7 94 aa7.18□□□□□ -1.26
SMARCD1-205ENST00000548573 GAGE2DQ9UEU5 116 aa7.18□□□□□ -1.26
SMARCD1-205ENST00000548573 AKAP6Q13023 2319 aa7.18□□□□□ -1.26
SMARCD1-205ENST00000548573 H7C423 109 aa7.18□□□□□ -1.26
SMARCD1-205ENST00000548573 IGHV3-53P01767 116 aa7.18□□□□□ -1.26
SMARCD1-205ENST00000548573 TIRAPP58753 221 aa7.18□□□□□ -1.26
SMARCD1-205ENST00000548573 Q6ZSN1 163 aa7.18□□□□□ -1.26
SMARCD1-205ENST00000548573 VPREB3Q9UKI3 123 aa7.18□□□□□ -1.26
SMARCD1-205ENST00000548573 SPTAN1Q13813 2472 aaKnown RBP7.18□□□□□ -1.26
SMARCD1-205ENST00000548573 IGLV5-45A0A087WSX0 123 aa7.17□□□□□ -1.26
SMARCD1-205ENST00000548573 RBMY1BA6NDE4 496 aaKnown RBP7.17□□□□□ -1.26
SMARCD1-205ENST00000548573 RBMY1EA6NEQ0 496 aaKnown RBP7.17□□□□□ -1.26
SMARCD1-205ENST00000548573 LST1O00453 97 aa7.17□□□□□ -1.26
SMARCD1-205ENST00000548573 RBMY1DP0C7P1 496 aaKnown RBP7.17□□□□□ -1.26
SMARCD1-205ENST00000548573 VPS13CQ709C8 3753 aa7.17□□□□□ -1.26
SMARCD1-205ENST00000548573 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.16□□□□□ -1.26
SMARCD1-205ENST00000548573 IGKV2-29A2NJV5 120 aaPredicted RBP7.16□□□□□ -1.26
SMARCD1-205ENST00000548573 A8MZ25 164 aa7.16□□□□□ -1.26
SMARCD1-205ENST00000548573 NDUFA1O15239 70 aa7.16□□□□□ -1.26
SMARCD1-205ENST00000548573 BEAN1Q3B7T3 259 aa7.16□□□□□ -1.26
SMARCD1-205ENST00000548573 ZNF702PQ9H963 129 aa7.16□□□□□ -1.26
SMARCD1-205ENST00000548573 Q9UF83 564 aa7.16□□□□□ -1.26
SMARCD1-205ENST00000548573 PRRC2AP48634 2157 aaKnown RBP7.16□□□□□ -1.26
SMARCD1-205ENST00000548573 TRAV4A0A0B4J268 109 aa7.16□□□□□ -1.26
SMARCD1-205ENST00000548573 C11orf72Q8NBR9 251 aa7.16□□□□□ -1.26
SMARCD1-205ENST00000548573 DOPEY2Q9Y3R5 2298 aa7.16□□□□□ -1.26
SMARCD1-205ENST00000548573 FAM240AA0A1B0GVK7 77 aa7.15□□□□□ -1.26
SMARCD1-205ENST00000548573 CRLF1O75462 422 aa7.15□□□□□ -1.26
SMARCD1-205ENST00000548573 CIRBPQ14011 172 aaKnown RBP7.15□□□□□ -1.26
SMARCD1-205ENST00000548573 MRPL23Q16540 153 aaKnown RBP7.15□□□□□ -1.26
SMARCD1-205ENST00000548573 DEFB121Q5J5C9 76 aa7.15□□□□□ -1.26
SMARCD1-205ENST00000548573 CDKN2A-AS1Q9UH64 79 aa7.15□□□□□ -1.26
SMARCD1-205ENST00000548573 RS1O15537 224 aa7.15□□□□□ -1.27
SMARCD1-205ENST00000548573 PRM2P04554 102 aa7.15□□□□□ -1.27
SMARCD1-205ENST00000548573 NHLRC4P0CG21 123 aaPredicted RBP7.15□□□□□ -1.27
SMARCD1-205ENST00000548573 NDUFV3P56181 108 aaKnown RBP7.15□□□□□ -1.27
SMARCD1-205ENST00000548573 GAGE5Q13069 117 aa7.15□□□□□ -1.27
SMARCD1-205ENST00000548573 GAGE6Q13070 117 aa7.15□□□□□ -1.27
SMARCD1-205ENST00000548573 Q6YL49 198 aa7.15□□□□□ -1.27
SMARCD1-205ENST00000548573 TMEM101Q96IK0 257 aa7.15□□□□□ -1.27
SMARCD1-205ENST00000548573 NACAE9PAV3 2078 aa7.14□□□□□ -1.27
SMARCD1-205ENST00000548573 SLURP1P55000 103 aa7.14□□□□□ -1.27
SMARCD1-205ENST00000548573 NPC2P61916 151 aa7.14□□□□□ -1.27
SMARCD1-205ENST00000548573 Q6ZSV7 163 aa7.14□□□□□ -1.27
SMARCD1-205ENST00000548573 CLEC2BQ92478 149 aa7.14□□□□□ -1.27
SMARCD1-205ENST00000548573 LINC01587Q99440 93 aa7.14□□□□□ -1.27
SMARCD1-205ENST00000548573 PEMTQ9UBM1 199 aa7.14□□□□□ -1.27
SMARCD1-205ENST00000548573 A0A096LNT2 108 aa7.13□□□□□ -1.27
SMARCD1-205ENST00000548573 IGHV3-38A0A0C4DH36 116 aa7.13□□□□□ -1.27
SMARCD1-205ENST00000548573 IGLV5-39A0A0G2JS06 123 aa7.13□□□□□ -1.27
SMARCD1-205ENST00000548573 HERVK_113P63121 156 aa7.13□□□□□ -1.27
SMARCD1-205ENST00000548573 TTC32Q5I0X7 151 aa7.13□□□□□ -1.27
SMARCD1-205ENST00000548573 CFAP161Q6P656 301 aa7.13□□□□□ -1.27
SMARCD1-205ENST00000548573 FAM19A3Q7Z5A8 133 aa7.13□□□□□ -1.27
SMARCD1-205ENST00000548573 C15orf53Q8NAA6 179 aa7.13□□□□□ -1.27
SMARCD1-205ENST00000548573 FSHBP01225 129 aa7.13□□□□□ -1.27
SMARCD1-205ENST00000548573 DGAT2L7PQ6IED9 249 aa7.13□□□□□ -1.27
SMARCD1-205ENST00000548573 COPS9Q8WXC6 57 aa7.13□□□□□ -1.27
SMARCD1-205ENST00000548573 MAP6D1Q9H9H5 199 aa7.13□□□□□ -1.27
SMARCD1-205ENST00000548573 INSP01308 110 aa7.12□□□□□ -1.27
SMARCD1-205ENST00000548573 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.12□□□□□ -1.27
SMARCD1-205ENST00000548573 LINC00308Q8TCZ7 52 aa7.12□□□□□ -1.27
SMARCD1-205ENST00000548573 CITED2Q99967 270 aaPredicted RBP7.12□□□□□ -1.27
SMARCD1-205ENST00000548573 IGHV3OR16-12A0A075B7B8 117 aa7.12□□□□□ -1.27
SMARCD1-205ENST00000548573 DEFB136Q30KP8 78 aa7.12□□□□□ -1.27
SMARCD1-205ENST00000548573 CSDC2Q9Y534 153 aaKnown RBP7.12□□□□□ -1.27
SMARCD1-205ENST00000548573 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.11□□□□□ -1.272e-8■■■■■ 28.8
SMARCD1-205ENST00000548573 COX6A2Q02221 97 aa7.11□□□□□ -1.27
SMARCD1-205ENST00000548573 LINC00242Q5T6M2 205 aa7.11□□□□□ -1.27
SMARCD1-205ENST00000548573 C18orf65Q6ZTR6 163 aa7.11□□□□□ -1.27
SMARCD1-205ENST00000548573 Q8N2B8 174 aa7.11□□□□□ -1.27
SMARCD1-205ENST00000548573 DAND5Q8N907 189 aa7.11□□□□□ -1.27
SMARCD1-205ENST00000548573 Q9H8V8 135 aa7.11□□□□□ -1.27
SMARCD1-205ENST00000548573 C4orf3Q8WVX3 66 aa7.1□□□□□ -1.27
SMARCD1-205ENST00000548573 PPDPFQ9H3Y8 114 aa7.1□□□□□ -1.27
SMARCD1-205ENST00000548573 GAGE12JA6NER3 117 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms