RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 MGPP08493 103 aa10.26□□□□□ -0.77
RAPGEF3-217ENST00000548434 CNBPP62633 177 aaKnown RBP10.26□□□□□ -0.77
RAPGEF3-217ENST00000548434 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.26□□□□□ -0.77
RAPGEF3-217ENST00000548434 GATD1Q8NB37 220 aa10.26□□□□□ -0.77
RAPGEF3-217ENST00000548434 DPH3P1Q9H4G8 78 aa10.26□□□□□ -0.77
RAPGEF3-217ENST00000548434 LYPD6BQ8NI32 183 aa10.25□□□□□ -0.77
RAPGEF3-217ENST00000548434 GTSF1Q8WW33 167 aa10.25□□□□□ -0.77
RAPGEF3-217ENST00000548434 TMEM243Q9BU79 118 aa10.25□□□□□ -0.77
RAPGEF3-217ENST00000548434 TRAV8-4A0A0B4J246 113 aa10.24□□□□□ -0.77
RAPGEF3-217ENST00000548434 TEX46H3BTG2 121 aa10.24□□□□□ -0.77
RAPGEF3-217ENST00000548434 TRGC1P0CF51 173 aa10.24□□□□□ -0.77
RAPGEF3-217ENST00000548434 Q6ZNX1 250 aa10.24□□□□□ -0.77
RAPGEF3-217ENST00000548434 CLRN3Q8NCR9 226 aa10.24□□□□□ -0.77
RAPGEF3-217ENST00000548434 RNASE7Q9H1E1 156 aaKnown RBP10.24□□□□□ -0.77
RAPGEF3-217ENST00000548434 TNXBP22105 4242 aa10.23□□□□□ -0.77
RAPGEF3-217ENST00000548434 IGLV10-54A0A075B6I4 117 aa10.23□□□□□ -0.77
RAPGEF3-217ENST00000548434 XKRY2A2RUG3 117 aa10.23□□□□□ -0.77
RAPGEF3-217ENST00000548434 OXTP01178 125 aa10.23□□□□□ -0.77
RAPGEF3-217ENST00000548434 FOXA3P55318 350 aaPredicted RBP10.23□□□□□ -0.77
RAPGEF3-217ENST00000548434 BIN3Q9NQY0 253 aa10.23□□□□□ -0.77
RAPGEF3-217ENST00000548434 TAGLN2P37802 199 aaKnown RBP10.22□□□□□ -0.77
RAPGEF3-217ENST00000548434 RPP21Q9H633 154 aaKnown RBP10.22□□□□□ -0.77
RAPGEF3-217ENST00000548434 TRAV26-2A0A0B4J265 109 aa10.21□□□□□ -0.77
RAPGEF3-217ENST00000548434 C15orf56Q8N910 161 aa10.2□□□□□ -0.78
RAPGEF3-217ENST00000548434 RPL39LQ96EH5 51 aaKnown RBP10.2□□□□□ -0.78
RAPGEF3-217ENST00000548434 UBR4Q5T4S7 5183 aa10.2□□□□□ -0.78
RAPGEF3-217ENST00000548434 FAM231BA6NCW3 169 aa10.19□□□□□ -0.78
RAPGEF3-217ENST00000548434 TMEM250H0YL14 139 aa10.19□□□□□ -0.78
RAPGEF3-217ENST00000548434 TWIST1Q15672 202 aa10.19□□□□□ -0.78
RAPGEF3-217ENST00000548434 FAM231DQ6ZW35 169 aa10.19□□□□□ -0.78
RAPGEF3-217ENST00000548434 GAS8-AS1O95177 125 aa10.18□□□□□ -0.78
RAPGEF3-217ENST00000548434 MT1HL1P0DM35 61 aa10.18□□□□□ -0.78
RAPGEF3-217ENST00000548434 RPL37AP61513 92 aaKnown RBP10.18□□□□□ -0.78
RAPGEF3-217ENST00000548434 COTL1Q14019 142 aa10.18□□□□□ -0.78
RAPGEF3-217ENST00000548434 AMTP48728 403 aa10.17□□□□□ -0.78
RAPGEF3-217ENST00000548434 TRBV6-5A0A0K0K1A5 114 aa10.16□□□□□ -0.78
RAPGEF3-217ENST00000548434 hDV102S1A0JD36 115 aa10.16□□□□□ -0.78
RAPGEF3-217ENST00000548434 SPACA4Q8TDM5 124 aa10.16□□□□□ -0.78
RAPGEF3-217ENST00000548434 NDUFS6O75380 124 aaKnown RBP10.15□□□□□ -0.78
RAPGEF3-217ENST00000548434 NCR2O95944 276 aa10.15□□□□□ -0.78
RAPGEF3-217ENST00000548434 CHTF8P0CG12 524 aa10.15□□□□□ -0.78
RAPGEF3-217ENST00000548434 ESDP10768 282 aa10.15□□□□□ -0.78
RAPGEF3-217ENST00000548434 A0A087WYN8 130 aa10.14□□□□□ -0.79
RAPGEF3-217ENST00000548434 GAGE12HA6NDE8 117 aa10.14□□□□□ -0.79
RAPGEF3-217ENST00000548434 H7C423 109 aa10.14□□□□□ -0.79
RAPGEF3-217ENST00000548434 CT83Q5H943 113 aa10.14□□□□□ -0.79
RAPGEF3-217ENST00000548434 SERTAD4-AS1Q5TG53 156 aa10.14□□□□□ -0.79
RAPGEF3-217ENST00000548434 ALKAL2Q6UX46 152 aa10.14□□□□□ -0.79
RAPGEF3-217ENST00000548434 RNF185Q96GF1 192 aa10.14□□□□□ -0.79
RAPGEF3-217ENST00000548434 PLAC8Q9NZF1 115 aa10.14□□□□□ -0.79
RAPGEF3-217ENST00000548434 IGHV3-64A0A075B6Q5 118 aa10.13□□□□□ -0.79
RAPGEF3-217ENST00000548434 SDHAF1A6NFY7 115 aa10.13□□□□□ -0.79
RAPGEF3-217ENST00000548434 GATCO43716 136 aaKnown RBP10.13□□□□□ -0.79
RAPGEF3-217ENST00000548434 POLR2KP53803 58 aaKnown RBP10.13□□□□□ -0.79
RAPGEF3-217ENST00000548434 BLOC1S1P78537 153 aa10.13□□□□□ -0.79
RAPGEF3-217ENST00000548434 FOXI1Q12951 378 aa10.13□□□□□ -0.79
RAPGEF3-217ENST00000548434 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.12□□□□□ -0.79
RAPGEF3-217ENST00000548434 IGKV2-29A2NJV5 120 aaPredicted RBP10.12□□□□□ -0.79
RAPGEF3-217ENST00000548434 A8MWL6 223 aa10.12□□□□□ -0.79
RAPGEF3-217ENST00000548434 TSHBP01222 138 aa10.12□□□□□ -0.79
RAPGEF3-217ENST00000548434 GVQW2A0A096LPI5 108 aaPredicted RBP10.11□□□□□ -0.79
RAPGEF3-217ENST00000548434 UBE2L6O14933 153 aa10.11□□□□□ -0.79
RAPGEF3-217ENST00000548434 FGF6P10767 208 aa10.11□□□□□ -0.79
RAPGEF3-217ENST00000548434 TEX261Q6UWH6 196 aa10.11□□□□□ -0.79
RAPGEF3-217ENST00000548434 LINC01551Q86U37 167 aa10.11□□□□□ -0.79
RAPGEF3-217ENST00000548434 CHCHD10Q8WYQ3 142 aaPredicted RBP10.11□□□□□ -0.79
RAPGEF3-217ENST00000548434 PRSS3P2Q8NHM4 247 aa10.1□□□□□ -0.79
RAPGEF3-217ENST00000548434 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.09□□□□□ -0.79
RAPGEF3-217ENST00000548434 I3L3M4 83 aa10.09□□□□□ -0.79
RAPGEF3-217ENST00000548434 RAB4AP20338 218 aa10.09□□□□□ -0.79
RAPGEF3-217ENST00000548434 RPS10P46783 165 aaKnown RBP10.09□□□□□ -0.79
RAPGEF3-217ENST00000548434 Q6ZRU5 148 aa10.09□□□□□ -0.79
RAPGEF3-217ENST00000548434 AKAP14Q86UN6 197 aa10.09□□□□□ -0.79
RAPGEF3-217ENST00000548434 OR5A1Q8NGJ0 315 aa10.09□□□□□ -0.79
RAPGEF3-217ENST00000548434 TMEM191AQ9H0A3 160 aa10.09□□□□□ -0.79
RAPGEF3-217ENST00000548434 TRBV27A0A0K0K1C4 114 aa10.08□□□□□ -0.8
RAPGEF3-217ENST00000548434 SRP19P09132 144 aaKnown RBP10.08□□□□□ -0.8
RAPGEF3-217ENST00000548434 ZNF25P17030 456 aaPredicted RBP10.08□□□□□ -0.8
RAPGEF3-217ENST00000548434 COX6A2Q02221 97 aa10.08□□□□□ -0.8
RAPGEF3-217ENST00000548434 CFAP161Q6P656 301 aa10.08□□□□□ -0.8
RAPGEF3-217ENST00000548434 MRPL52Q86TS9 123 aaKnown RBP10.08□□□□□ -0.8
RAPGEF3-217ENST00000548434 TSKUQ8WUA8 353 aa10.08□□□□□ -0.8
RAPGEF3-217ENST00000548434 FAM210AQ96ND0 272 aa10.08□□□□□ -0.8
RAPGEF3-217ENST00000548434 OSTCQ9NRP0 149 aa10.08□□□□□ -0.8
RAPGEF3-217ENST00000548434 AP5S1Q9NUS5 200 aa10.08□□□□□ -0.8
RAPGEF3-217ENST00000548434 LINC00959A0A1B0GUT2 108 aa10.07□□□□□ -0.8
RAPGEF3-217ENST00000548434 HIGD1CA8MV81 97 aa10.07□□□□□ -0.8
RAPGEF3-217ENST00000548434 APCSP02743 223 aa10.07□□□□□ -0.8
RAPGEF3-217ENST00000548434 HIGD2BQ4VC39 106 aa10.07□□□□□ -0.8
RAPGEF3-217ENST00000548434 CDC42SE2Q9NRR3 84 aa10.07□□□□□ -0.8
RAPGEF3-217ENST00000548434 V9GYV3 84 aa10.07□□□□□ -0.8
RAPGEF3-217ENST00000548434 IGKV3OR2-268A0A0C4DH90 116 aa10.06□□□□□ -0.8
RAPGEF3-217ENST00000548434 A0A1B0GUT8 65 aa10.06□□□□□ -0.8
RAPGEF3-217ENST00000548434 SMIM15Q7Z3B0 74 aa10.06□□□□□ -0.8
RAPGEF3-217ENST00000548434 PMCHP20382 165 aa10.05□□□□□ -0.8
RAPGEF3-217ENST00000548434 AMMECR1LQ6DCA0 310 aa10.05□□□□□ -0.8
RAPGEF3-217ENST00000548434 RNASEKQ6P5S7 137 aaKnown RBP10.05□□□□□ -0.8
RAPGEF3-217ENST00000548434 NRACQ8N912 160 aa10.05□□□□□ -0.8
RAPGEF3-217ENST00000548434 SMIM7Q9BQ49 75 aa10.05□□□□□ -0.8
RAPGEF3-217ENST00000548434 TMEM242Q9NWH2 141 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms