RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 M0R2Z0 102 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 APOMO95445 188 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 IGHV3-53P01767 116 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 SMR3BP02814 79 aaPredicted RBP1.93□□□□□ -2.1
PTCH1-216ENST00000548379 EVI2AP22794 236 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 G0S2P27469 103 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 SDC2P34741 201 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 PIGPP57054 158 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 HIST1H1AQ02539 215 aaPredicted RBP1.93□□□□□ -2.1
PTCH1-216ENST00000548379 SPINK13Q1W4C9 94 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 KRTAP25-1Q3LHN0 102 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 RNASE10Q5GAN6 216 aaKnown RBP1.93□□□□□ -2.1
PTCH1-216ENST00000548379 GDF5OSQ5U4N7 250 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 BAP18Q8IXM2 172 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 OR5H6Q8NGV6 325 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 DEFB104AQ8WTQ1 72 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 GPR146Q96CH1 333 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 CNBD2Q96M20 576 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 TMEM147Q9BVK8 224 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 FXYD6Q9H0Q3 95 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 Q9H521 79 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 NOP10Q9NPE3 64 aaKnown RBP1.93□□□□□ -2.1
PTCH1-216ENST00000548379 PAIP2BQ9ULR5 123 aaKnown RBP1.93□□□□□ -2.1
PTCH1-216ENST00000548379 ANAPC10Q9UM13 185 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 CARHSP1Q9Y2V2 147 aaKnown RBP1.93□□□□□ -2.1
PTCH1-216ENST00000548379 PXMP4Q9Y6I8 212 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 U3KQ87 197 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 PLECQ15149 4684 aaKnown RBP1.93□□□□□ -2.1
PTCH1-216ENST00000548379 FRAS1Q86XX4 4008 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 RYR1P21817 5038 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 KMT2AQ03164 3969 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 TRAV12-2A0A075B6T6 113 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 TRAV5A0A0B4J249 113 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 CRYM-AS1A6NIL9 109 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 INMT-MINDY4F8WBC2 141 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 SH2D1AO60880 128 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 IGKV1-5P01602 117 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 SULT1A3P0DMM9 295 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 SULT1A4P0DMN0 295 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 FGF6P10767 208 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 LGALS3P17931 250 aaKnown RBP1.92□□□□□ -2.1
PTCH1-216ENST00000548379 RPL7P18124 248 aaKnown RBP1.92□□□□□ -2.1
PTCH1-216ENST00000548379 AQP4P55087 323 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 DEFB1P60022 68 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 ESRGQ1W209 222 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 SCGB2B2Q4G0G5 96 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 C10orf91Q5T1B1 145 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 Q6ZQT7 251 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 SNX29P2Q8IUI4 249 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 C10orf126Q8N4M7 172 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 ZFAND2AQ8N6M9 145 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 LHFPL5Q8TAF8 219 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 TMEM263Q8WUH6 116 aaKnown RBP1.92□□□□□ -2.1
PTCH1-216ENST00000548379 UBE2WQ96B02 151 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 SFRP2Q96HF1 295 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 BTF3L4Q96K17 158 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 TP53RKQ96S44 253 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 SIGMAR1Q99720 223 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 TMEM70Q9BUB7 260 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 TMEM222Q9H0R3 208 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 MRPL36Q9P0J6 103 aaKnown RBP1.92□□□□□ -2.1
PTCH1-216ENST00000548379 PKIGQ9Y2B9 76 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 LY96Q9Y6Y9 160 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 TMEM56-RWDD3S4R434 201 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 ABCA13Q86UQ4 5058 aa1.92□□□□□ -2.1
PTCH1-216ENST00000548379 TRBV24-1A0A075B6N3 115 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 A0A087WTM6 91 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 A0A0B4J2C4 111 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 FAM25AB3EWG3 89 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 FAM25CB3EWG5 89 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 FAM25GB3EWG6 89 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 LECT2O14960 151 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 CDS2O95674 445 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 IGLV6-57P01721 117 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 PRM2P04554 102 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 IGKV4-1P06312 121 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 OR4E1P0C645 316 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 ESDP10768 282 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 SRIP30626 198 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 ZNF90Q03938 601 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 AKR1C1Q04828 323 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 FABP9Q0Z7S8 132 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 SURF2Q15527 256 aaPredicted RBP1.91□□□□□ -2.1
PTCH1-216ENST00000548379 NMSQ5H8A3 153 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 AMTNQ6UX39 209 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 IZUMO2Q6UXV1 221 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 TMED4Q7Z7H5 227 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 OR2D3Q8NGH3 330 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 TERB2Q8NHR7 220 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 HIST1H2BAQ96A08 127 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 BORCS7Q96B45 105 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 CIB3Q96Q77 187 aaPredicted RBP1.91□□□□□ -2.1
PTCH1-216ENST00000548379 TRGV9Q99603 122 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 COMMD3Q9UBI1 195 aa1.91□□□□□ -2.1
PTCH1-216ENST00000548379 DNAH10Q8IVF4 4471 aa1.9□□□□□ -2.1
PTCH1-216ENST00000548379 A0A096LPF7 62 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 TRGV1A0A0A0MS02 117 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 TRGV4A0A0C4DH28 118 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 A8MTW9 85 aa1.9□□□□□ -2.11
PTCH1-216ENST00000548379 HYPMO75409 117 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms