RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 NCS1P62166 190 aa2.4□□□□□ -2.03
CBX5-203ENST00000547872 RPL18AQ02543 176 aaKnown RBP2.4□□□□□ -2.03
CBX5-203ENST00000547872 KRTAP26-1Q6PEX3 210 aa2.4□□□□□ -2.03
CBX5-203ENST00000547872 C12orf45Q8N5I9 185 aaPredicted RBP2.4□□□□□ -2.03
CBX5-203ENST00000547872 C15orf56Q8N910 161 aa2.4□□□□□ -2.03
CBX5-203ENST00000547872 CMTM2Q8TAZ6 248 aa2.4□□□□□ -2.03
CBX5-203ENST00000547872 DIRAS2Q96HU8 199 aa2.4□□□□□ -2.03
CBX5-203ENST00000547872 CHCHD7Q9BUK0 85 aa2.4□□□□□ -2.03
CBX5-203ENST00000547872 NAA50Q9GZZ1 169 aaKnown RBP2.4□□□□□ -2.03
CBX5-203ENST00000547872 NUDT15Q9NV35 164 aa2.4□□□□□ -2.03
CBX5-203ENST00000547872 GSKIPQ9P0R6 139 aa2.4□□□□□ -2.03
CBX5-203ENST00000547872 MTFP1Q9UDX5 166 aa2.4□□□□□ -2.03
CBX5-203ENST00000547872 LSM5Q9Y4Y9 91 aaKnown RBP2.4□□□□□ -2.03
CBX5-203ENST00000547872 TMSB15BA0A087X1C1 80 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 A0A1W2PNN7 141 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 GRIFINA4D1Z8 144 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 L7N2F9 121 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 GCGP01275 180 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 APOA1P02647 267 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 IGLV7-43P04211 117 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 NBEAP1P0C6P0 100 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 BCL2P10415 239 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 ZNF80P51504 273 aaPredicted RBP2.39□□□□□ -2.03
CBX5-203ENST00000547872 GABARAPL2P60520 117 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 RAB2AP61019 212 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 UBE2D3P61077 147 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 VBP1P61758 197 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 UBE2D2P62837 147 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 PPP1R1AQ13522 171 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 PDE6HQ13956 83 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 IL18Q14116 193 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 MCFD2Q8NI22 146 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 TVP23CQ96ET8 276 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 CARD19Q96LW7 228 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 PRRT1Q99946 306 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 NDFIP1Q9BT67 221 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 DERL1Q9BUN8 251 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 CYTL1Q9NRR1 136 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 SCP2D1Q9UJQ7 156 aa2.39□□□□□ -2.03
CBX5-203ENST00000547872 IGLV4-60A0A075B6I1 120 aa2.38□□□□□ -2.03
CBX5-203ENST00000547872 IGLV1-50A0A075B6I6 118 aa2.38□□□□□ -2.03
CBX5-203ENST00000547872 TRBV7-3A0A075B6L6 115 aa2.38□□□□□ -2.03
CBX5-203ENST00000547872 MUC21A0A140T8X8 626 aa2.38□□□□□ -2.03
CBX5-203ENST00000547872 FAM25EA8MYX2 175 aa2.38□□□□□ -2.03
CBX5-203ENST00000547872 K7EPK0 472 aa2.38□□□□□ -2.03
CBX5-203ENST00000547872 M0R2T5 61 aa2.38□□□□□ -2.03
CBX5-203ENST00000547872 HMGB3O15347 200 aaKnown RBP2.38□□□□□ -2.03
CBX5-203ENST00000547872 SNAI2O43623 268 aa2.38□□□□□ -2.03
CBX5-203ENST00000547872 GIPP09681 153 aaPredicted RBP2.38□□□□□ -2.03
CBX5-203ENST00000547872 RPL13AP40429 203 aaKnown RBP2.38□□□□□ -2.03
CBX5-203ENST00000547872 HERVK_113P61574 105 aa2.38□□□□□ -2.03
CBX5-203ENST00000547872 C9orf116Q5BN46 136 aaPredicted RBP2.38□□□□□ -2.03
CBX5-203ENST00000547872 TMEM14EPQ6UXP3 125 aa2.38□□□□□ -2.03
CBX5-203ENST00000547872 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
CBX5-203ENST00000547872 FAM19A5Q7Z5A7 132 aaPredicted RBP2.38□□□□□ -2.03
CBX5-203ENST00000547872 PRNTQ86SH4 94 aa2.38□□□□□ -2.03
CBX5-203ENST00000547872 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.38□□□□□ -2.03
CBX5-203ENST00000547872 DYNC2LI1Q8TCX1 351 aa2.38□□□□□ -2.03
CBX5-203ENST00000547872 CHCHD10Q8WYQ3 142 aaPredicted RBP2.38□□□□□ -2.03
CBX5-203ENST00000547872 FXYD5Q96DB9 178 aa2.38□□□□□ -2.03
CBX5-203ENST00000547872 KRTAP4-1Q9BYQ7 146 aa2.38□□□□□ -2.03
CBX5-203ENST00000547872 SLIRPQ9GZT3 109 aaKnown RBP2.38□□□□□ -2.03
CBX5-203ENST00000547872 UQCC1Q9NVA1 299 aa2.38□□□□□ -2.03
CBX5-203ENST00000547872 TMEM14CQ9P0S9 112 aa2.38□□□□□ -2.03
CBX5-203ENST00000547872 TRBV25-1A0A075B6N4 114 aa2.37□□□□□ -2.03
CBX5-203ENST00000547872 DUXBA0A1W2PPF3 345 aa2.37□□□□□ -2.03
CBX5-203ENST00000547872 RBAKDNA6NC62 111 aa2.37□□□□□ -2.03
CBX5-203ENST00000547872 UBE2L6O14933 153 aa2.37□□□□□ -2.03
CBX5-203ENST00000547872 SFT2D2O95562 160 aa2.37□□□□□ -2.03
CBX5-203ENST00000547872 SLC25A6P12236 298 aa2.37□□□□□ -2.03
CBX5-203ENST00000547872 DEFA1P59665 94 aa2.37□□□□□ -2.03
CBX5-203ENST00000547872 UBE2BP63146 152 aa2.37□□□□□ -2.03
CBX5-203ENST00000547872 IAH1Q2TAA2 248 aaPredicted RBP2.37□□□□□ -2.03
CBX5-203ENST00000547872 SPANXN2Q5MJ10 180 aa2.37□□□□□ -2.03
CBX5-203ENST00000547872 ZFP2Q6ZN57 461 aa2.37□□□□□ -2.03
CBX5-203ENST00000547872 NTM-AS1Q6ZSK4 140 aa2.37□□□□□ -2.03
CBX5-203ENST00000547872 LINC00173Q6ZV60 143 aa2.37□□□□□ -2.03
CBX5-203ENST00000547872 NKAPP1Q8N9T2 125 aa2.37□□□□□ -2.03
CBX5-203ENST00000547872 SMIM8Q96KF7 97 aa2.37□□□□□ -2.03
CBX5-203ENST00000547872 SCGB3A2Q96PL1 93 aa2.37□□□□□ -2.03
CBX5-203ENST00000547872 HIST1H4GQ99525 98 aa2.37□□□□□ -2.03
CBX5-203ENST00000547872 LINC00474Q9P2X8 69 aa2.37□□□□□ -2.03
CBX5-203ENST00000547872 MUC17Q685J3 4493 aa2.37□□□□□ -2.03
CBX5-203ENST00000547872 B4DEV8 164 aa2.36□□□□□ -2.03
CBX5-203ENST00000547872 MGPP08493 103 aa2.36□□□□□ -2.03
CBX5-203ENST00000547872 ARMS2P0C7Q2 107 aa2.36□□□□□ -2.03
CBX5-203ENST00000547872 XCL1P47992 114 aa2.36□□□□□ -2.03
CBX5-203ENST00000547872 PKIAP61925 76 aa2.36□□□□□ -2.03
CBX5-203ENST00000547872 EIF5AL1Q6IS14 154 aaKnown RBP2.36□□□□□ -2.03
CBX5-203ENST00000547872 LINC01551Q86U37 167 aa2.36□□□□□ -2.03
CBX5-203ENST00000547872 LINC00337Q8N6G1 96 aa2.36□□□□□ -2.03
CBX5-203ENST00000547872 FAM167A-AS1Q96KT0 104 aa2.36□□□□□ -2.03
CBX5-203ENST00000547872 OR5AC2Q9NZP5 309 aa2.36□□□□□ -2.03
CBX5-203ENST00000547872 IGKV2-28A0A075B6P5 120 aa2.35□□□□□ -2.03
CBX5-203ENST00000547872 IGHV1-24A0A0C4DH33 117 aa2.35□□□□□ -2.03
CBX5-203ENST00000547872 ANKRD20A5PA0PJZ0 165 aa2.35□□□□□ -2.03
CBX5-203ENST00000547872 C7orf66A4D0T2 115 aa2.35□□□□□ -2.03
CBX5-203ENST00000547872 FNDC10F2Z333 226 aa2.35□□□□□ -2.03
CBX5-203ENST00000547872 IGKV2D-28P01615 120 aa2.35□□□□□ -2.03
CBX5-203ENST00000547872 TPT1P13693 172 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms