RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 AMTP48728 403 aa12.43□□□□□ -0.42
PRPF40B-206ENST00000547764 CDPF1Q6NVV7 123 aa12.43□□□□□ -0.42
PRPF40B-206ENST00000547764 MRAP2Q96G30 205 aa12.43□□□□□ -0.42
PRPF40B-206ENST00000547764 PPP1R2P9O14990 202 aa12.42□□□□□ -0.42
PRPF40B-206ENST00000547764 CRPP02741 224 aa12.42□□□□□ -0.42
PRPF40B-206ENST00000547764 RPS10P46783 165 aaKnown RBP12.42□□□□□ -0.42
PRPF40B-206ENST00000547764 CAMPP49913 170 aa12.42□□□□□ -0.42
PRPF40B-206ENST00000547764 A0A1B0GW15 77 aa12.41□□□□□ -0.42
PRPF40B-206ENST00000547764 WFDC2Q14508 124 aa12.41□□□□□ -0.42
PRPF40B-206ENST00000547764 MRPL54Q6P161 138 aaKnown RBP12.41□□□□□ -0.42
PRPF40B-206ENST00000547764 UQCC3Q6UW78 93 aa12.41□□□□□ -0.42
PRPF40B-206ENST00000547764 Q8N814 137 aa12.41□□□□□ -0.42
PRPF40B-206ENST00000547764 ST20Q9HBF5 79 aa12.41□□□□□ -0.42
PRPF40B-206ENST00000547764 SMKR1H3BMG3 65 aa12.4□□□□□ -0.42
PRPF40B-206ENST00000547764 UBE2L6O14933 153 aa12.4□□□□□ -0.42
PRPF40B-206ENST00000547764 NCR2O95944 276 aa12.4□□□□□ -0.42
PRPF40B-206ENST00000547764 FAM104BQ5XKR9 115 aa12.4□□□□□ -0.42
PRPF40B-206ENST00000547764 LINC00269Q8N2A0 174 aa12.4□□□□□ -0.42
PRPF40B-206ENST00000547764 BAALCQ8WXS3 180 aa12.4□□□□□ -0.42
PRPF40B-206ENST00000547764 PRR34Q9NV39 138 aa12.4□□□□□ -0.42
PRPF40B-206ENST00000547764 A0A1B0GUV1 79 aa12.39□□□□□ -0.43
PRPF40B-206ENST00000547764 A0A1B0GXF2 115 aa12.39□□□□□ -0.43
PRPF40B-206ENST00000547764 I3L3M4 83 aa12.39□□□□□ -0.43
PRPF40B-206ENST00000547764 LECT2O14960 151 aa12.39□□□□□ -0.43
PRPF40B-206ENST00000547764 MT-ND4LP03901 98 aa12.39□□□□□ -0.43
PRPF40B-206ENST00000547764 PMCHP20382 165 aa12.39□□□□□ -0.43
PRPF40B-206ENST00000547764 CLPSL2Q6UWE3 100 aa12.39□□□□□ -0.43
PRPF40B-206ENST00000547764 C20orf203Q8NBC4 194 aa12.39□□□□□ -0.43
PRPF40B-206ENST00000547764 TMEM70Q9BUB7 260 aa12.39□□□□□ -0.43
PRPF40B-206ENST00000547764 C1orf43Q9BWL3 253 aa12.39□□□□□ -0.43
PRPF40B-206ENST00000547764 APOBP04114 4563 aaKnown RBP12.39□□□□□ -0.43
PRPF40B-206ENST00000547764 IGLV4-60A0A075B6I1 120 aa12.38□□□□□ -0.43
PRPF40B-206ENST00000547764 TMEM218A2RU14 115 aa12.38□□□□□ -0.43
PRPF40B-206ENST00000547764 APCSP02743 223 aa12.38□□□□□ -0.43
PRPF40B-206ENST00000547764 ADCYAP1P18509 176 aa12.38□□□□□ -0.43
PRPF40B-206ENST00000547764 POLR2KP53803 58 aaKnown RBP12.38□□□□□ -0.43
PRPF40B-206ENST00000547764 HBBP68871 147 aa12.38□□□□□ -0.43
PRPF40B-206ENST00000547764 MIAQ16674 131 aa12.38□□□□□ -0.43
PRPF40B-206ENST00000547764 MRPL51Q4U2R6 128 aaKnown RBP12.38□□□□□ -0.43
PRPF40B-206ENST00000547764 ANAPC16Q96DE5 110 aa12.38□□□□□ -0.43
PRPF40B-206ENST00000547764 CDK2AP2O75956 126 aa12.37□□□□□ -0.43
PRPF40B-206ENST00000547764 S100A8P05109 93 aa12.37□□□□□ -0.43
PRPF40B-206ENST00000547764 NRACQ8N912 160 aa12.37□□□□□ -0.43
PRPF40B-206ENST00000547764 NTN5Q8WTR8 489 aaPredicted RBP12.37□□□□□ -0.43
PRPF40B-206ENST00000547764 IGLV5-52A0A0A0MRZ9 124 aa12.36□□□□□ -0.43
PRPF40B-206ENST00000547764 TRBV27A0A0K0K1C4 114 aa12.36□□□□□ -0.43
PRPF40B-206ENST00000547764 F8W036 122 aa12.36□□□□□ -0.43
PRPF40B-206ENST00000547764 PPP1R17O96001 155 aa12.36□□□□□ -0.43
PRPF40B-206ENST00000547764 TSHBP01222 138 aa12.36□□□□□ -0.43
PRPF40B-206ENST00000547764 REG3AQ06141 175 aa12.36□□□□□ -0.43
PRPF40B-206ENST00000547764 HSPG2P98160 4391 aa12.36□□□□□ -0.43
PRPF40B-206ENST00000547764 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.35□□□□□ -0.43
PRPF40B-206ENST00000547764 IGKV2-29A2NJV5 120 aaPredicted RBP12.35□□□□□ -0.43
PRPF40B-206ENST00000547764 ATP5L2Q7Z4Y8 100 aa12.35□□□□□ -0.43
PRPF40B-206ENST00000547764 COMMD7Q86VX2 200 aa12.35□□□□□ -0.43
PRPF40B-206ENST00000547764 TMEM242Q9NWH2 141 aa12.35□□□□□ -0.43
PRPF40B-206ENST00000547764 LINC00862A6NCI5 91 aa12.34□□□□□ -0.43
PRPF40B-206ENST00000547764 H7C423 109 aa12.34□□□□□ -0.43
PRPF40B-206ENST00000547764 CKS2P33552 79 aa12.34□□□□□ -0.43
PRPF40B-206ENST00000547764 KRTAP10-1P60331 282 aa12.34□□□□□ -0.43
PRPF40B-206ENST00000547764 SUMO2P61956 95 aaKnown RBP12.34□□□□□ -0.43
PRPF40B-206ENST00000547764 VCYO14598 125 aa12.33□□□□□ -0.44
PRPF40B-206ENST00000547764 ESDP10768 282 aa12.33□□□□□ -0.44
PRPF40B-206ENST00000547764 GCSHP23434 173 aa12.33□□□□□ -0.44
PRPF40B-206ENST00000547764 AMMECR1LQ6DCA0 310 aa12.33□□□□□ -0.44
PRPF40B-206ENST00000547764 KRTAP26-1Q6PEX3 210 aa12.33□□□□□ -0.44
PRPF40B-206ENST00000547764 FGF6P10767 208 aa12.32□□□□□ -0.44
PRPF40B-206ENST00000547764 RNASEKQ6P5S7 137 aaKnown RBP12.32□□□□□ -0.44
PRPF40B-206ENST00000547764 SEC11CQ9BY50 192 aa12.32□□□□□ -0.44
PRPF40B-206ENST00000547764 IGLV10-54A0A075B6I4 117 aa12.31□□□□□ -0.44
PRPF40B-206ENST00000547764 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.31□□□□□ -0.44
PRPF40B-206ENST00000547764 TRBV24-1A0A075B6N3 115 aa12.31□□□□□ -0.44
PRPF40B-206ENST00000547764 D6R8Y8 96 aa12.31□□□□□ -0.44
PRPF40B-206ENST00000547764 HLA-DQA1P01909 254 aa12.31□□□□□ -0.44
PRPF40B-206ENST00000547764 TRAV8-4A0A0B4J246 113 aa12.3□□□□□ -0.44
PRPF40B-206ENST00000547764 TNFRSF6BO95407 300 aa12.3□□□□□ -0.44
PRPF40B-206ENST00000547764 C20orf78Q9BR46 151 aa12.3□□□□□ -0.44
PRPF40B-206ENST00000547764 FCER1GP30273 86 aa12.29□□□□□ -0.44
PRPF40B-206ENST00000547764 BTF3L4Q96K17 158 aa12.29□□□□□ -0.44
PRPF40B-206ENST00000547764 PPBPP02775 128 aa12.28□□□□□ -0.44
PRPF40B-206ENST00000547764 ZNF25P17030 456 aaPredicted RBP12.28□□□□□ -0.44
PRPF40B-206ENST00000547764 KIR2DL4Q99706 377 aa12.28□□□□□ -0.44
PRPF40B-206ENST00000547764 IGKV3OR2-268A0A0C4DH90 116 aa12.27□□□□□ -0.45
PRPF40B-206ENST00000547764 C7orf77A4D0Y5 90 aa12.27□□□□□ -0.45
PRPF40B-206ENST00000547764 USP17L23D6RBM5 183 aa12.27□□□□□ -0.45
PRPF40B-206ENST00000547764 NPYP01303 97 aa12.27□□□□□ -0.45
PRPF40B-206ENST00000547764 RPL32P62910 135 aaKnown RBP12.27□□□□□ -0.45
PRPF40B-206ENST00000547764 IMMP2LQ96T52 175 aa12.27□□□□□ -0.45
PRPF40B-206ENST00000547764 CTDSP1Q9GZU7 261 aa12.27□□□□□ -0.45
PRPF40B-206ENST00000547764 PHOX2AO14813 284 aa12.26□□□□□ -0.45
PRPF40B-206ENST00000547764 C14orf177Q52M58 125 aa12.26□□□□□ -0.45
PRPF40B-206ENST00000547764 C10orf91Q5T1B1 145 aa12.26□□□□□ -0.45
PRPF40B-206ENST00000547764 TMEM136Q6ZRR5 245 aa12.26□□□□□ -0.45
PRPF40B-206ENST00000547764 ORMDL3Q8N138 153 aa12.26□□□□□ -0.45
PRPF40B-206ENST00000547764 TMEM101Q96IK0 257 aa12.26□□□□□ -0.45
PRPF40B-206ENST00000547764 KRTAP17-1Q9BYP8 105 aa12.26□□□□□ -0.45
PRPF40B-206ENST00000547764 XGP55808 180 aa12.25□□□□□ -0.45
PRPF40B-206ENST00000547764 MRPL52Q86TS9 123 aaKnown RBP12.25□□□□□ -0.45
PRPF40B-206ENST00000547764 OR5A1Q8NGJ0 315 aa12.25□□□□□ -0.45
PRPF40B-206ENST00000547764 SMIM2Q9BVW6 85 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms