RNA–Protein interactions for RNA: ENST00000547605.5

RBFOX1-210, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-210ENST00000547605 GAGE1Q13065 139 aa15.49■□□□□ 0.07
RBFOX1-210ENST00000547605 GAGE4Q13068 117 aa15.49■□□□□ 0.07
RBFOX1-210ENST00000547605 GAGE5Q13069 117 aa15.49■□□□□ 0.07
RBFOX1-210ENST00000547605 GAGE13Q4V321 117 aa15.49■□□□□ 0.07
RBFOX1-210ENST00000547605 TRBV7-3A0A075B6L6 115 aa15.48■□□□□ 0.07
RBFOX1-210ENST00000547605 LOC100131303A0A0U1RQF7 123 aa15.48■□□□□ 0.07
RBFOX1-210ENST00000547605 VCYO14598 125 aa15.48■□□□□ 0.07
RBFOX1-210ENST00000547605 POLR2KP53803 58 aaKnown RBP15.48■□□□□ 0.07
RBFOX1-210ENST00000547605 IGLV2-18A0A075B6J9 118 aa15.47■□□□□ 0.07
RBFOX1-210ENST00000547605 PAX4O43316 350 aa15.47■□□□□ 0.07
RBFOX1-210ENST00000547605 DEFB104AQ8WTQ1 72 aa15.47■□□□□ 0.07
RBFOX1-210ENST00000547605 A0A0J9YY99 117 aa15.47■□□□□ 0.07
RBFOX1-210ENST00000547605 TCAPO15273 167 aa15.47■□□□□ 0.07
RBFOX1-210ENST00000547605 FCER1GP30273 86 aa15.47■□□□□ 0.07
RBFOX1-210ENST00000547605 RPL32P62910 135 aaKnown RBP15.47■□□□□ 0.07
RBFOX1-210ENST00000547605 MEGF8Q7Z7M0 2845 aa15.46■□□□□ 0.07
RBFOX1-210ENST00000547605 KIR2DL4Q99706 377 aa15.46■□□□□ 0.07
RBFOX1-210ENST00000547605 PAM16Q9Y3D7 125 aa15.46■□□□□ 0.07
RBFOX1-210ENST00000547605 HUWE1Q7Z6Z7 4374 aaKnown RBP15.46■□□□□ 0.07
RBFOX1-210ENST00000547605 TRAV26-1A0A087WT03 109 aa15.45■□□□□ 0.06
RBFOX1-210ENST00000547605 TRBV27A0A0K0K1C4 114 aa15.45■□□□□ 0.06
RBFOX1-210ENST00000547605 GYPEP15421 78 aa15.45■□□□□ 0.06
RBFOX1-210ENST00000547605 PHLDA1Q8WV24 401 aaPredicted RBP15.45■□□□□ 0.06
RBFOX1-210ENST00000547605 TRAV9-2A0A087WT02 112 aa15.45■□□□□ 0.06
RBFOX1-210ENST00000547605 A0A096LNJ9 63 aa15.45■□□□□ 0.06
RBFOX1-210ENST00000547605 I3L3M4 83 aa15.45■□□□□ 0.06
RBFOX1-210ENST00000547605 IGHV3-38A0A0C4DH36 116 aa15.44■□□□□ 0.06
RBFOX1-210ENST00000547605 LAGE3Q14657 143 aa15.43■□□□□ 0.06
RBFOX1-210ENST00000547605 LINC01545Q5VT33 79 aa15.43■□□□□ 0.06
RBFOX1-210ENST00000547605 LINC00173Q6ZV60 143 aa15.43■□□□□ 0.06
RBFOX1-210ENST00000547605 SPATA45Q537H7 98 aa15.43■□□□□ 0.06
RBFOX1-210ENST00000547605 VSIG2Q96IQ7 327 aa15.43■□□□□ 0.06
RBFOX1-210ENST00000547605 MIEN1Q9BRT3 115 aa15.43■□□□□ 0.06
RBFOX1-210ENST00000547605 DEFB131BA0A096LNP1 70 aa15.42■□□□□ 0.06
RBFOX1-210ENST00000547605 G0S2P27469 103 aa15.42■□□□□ 0.06
RBFOX1-210ENST00000547605 UBE2D3P61077 147 aa15.42■□□□□ 0.06
RBFOX1-210ENST00000547605 UBE2D2P62837 147 aa15.42■□□□□ 0.06
RBFOX1-210ENST00000547605 ORMDL2Q53FV1 153 aa15.42■□□□□ 0.06
RBFOX1-210ENST00000547605 DNAH9Q9NYC9 4486 aa15.42■□□□□ 0.06
RBFOX1-210ENST00000547605 IFI27L1Q96BM0 104 aa15.41■□□□□ 0.06
RBFOX1-210ENST00000547605 HSBP1L1C9JCN9 74 aa15.4■□□□□ 0.06
RBFOX1-210ENST00000547605 DAZ4Q86SG3 579 aaKnown RBP15.4■□□□□ 0.06
RBFOX1-210ENST00000547605 DAZ3Q9NR90 486 aaKnown RBP15.4■□□□□ 0.06
RBFOX1-210ENST00000547605 LINC01549A6NIU2 74 aa15.4■□□□□ 0.06
RBFOX1-210ENST00000547605 ATP5LO75964 103 aa15.4■□□□□ 0.06
RBFOX1-210ENST00000547605 LGALS9CQ6DKI2 356 aa15.4■□□□□ 0.06
RBFOX1-210ENST00000547605 COL7A1Q02388 2944 aa15.4■□□□□ 0.06
RBFOX1-210ENST00000547605 NUDT3O95989 172 aa15.39■□□□□ 0.05
RBFOX1-210ENST00000547605 COTL1Q14019 142 aa15.39■□□□□ 0.05
RBFOX1-210ENST00000547605 TRAV10A0A0B4J240 114 aa15.38■□□□□ 0.05
RBFOX1-210ENST00000547605 TSHBP01222 138 aa15.38■□□□□ 0.05
RBFOX1-210ENST00000547605 MRPL52Q86TS9 123 aaKnown RBP15.38■□□□□ 0.05
RBFOX1-210ENST00000547605 UQCR10Q9UDW1 63 aa15.38■□□□□ 0.05
RBFOX1-210ENST00000547605 A0A096LPF7 62 aa15.37■□□□□ 0.05
RBFOX1-210ENST00000547605 LINC00694P0DN24 101 aa15.36■□□□□ 0.05
RBFOX1-210ENST00000547605 ATP6V0E2Q8NHE4 81 aa15.36■□□□□ 0.05
RBFOX1-210ENST00000547605 C14orf144Q96I85 54 aa15.36■□□□□ 0.05
RBFOX1-210ENST00000547605 LBHQ53QV2 105 aaPredicted RBP15.36■□□□□ 0.05
RBFOX1-210ENST00000547605 ATOH7Q8N100 152 aa15.36■□□□□ 0.05
RBFOX1-210ENST00000547605 ICOSQ9Y6W8 199 aa15.36■□□□□ 0.05
RBFOX1-210ENST00000547605 MRPL23Q16540 153 aaKnown RBP15.35■□□□□ 0.05
RBFOX1-210ENST00000547605 PRKDCP78527 4128 aaKnown RBP15.34■□□□□ 0.05
RBFOX1-210ENST00000547605 H0Y8G0 127 aa15.33■□□□□ 0.05
RBFOX1-210ENST00000547605 IGLC3P0DOY3 106 aa15.33■□□□□ 0.05
RBFOX1-210ENST00000547605 H3BNG1 76 aa15.33■□□□□ 0.04
RBFOX1-210ENST00000547605 C2orf66Q6UXQ4 117 aa15.31■□□□□ 0.04
RBFOX1-210ENST00000547605 NTM-AS1Q6ZSK4 140 aa15.31■□□□□ 0.04
RBFOX1-210ENST00000547605 SH2D6Q7Z4S9 175 aa15.31■□□□□ 0.04
RBFOX1-210ENST00000547605 GTSF1LQ9H1H1 148 aa15.31■□□□□ 0.04
RBFOX1-210ENST00000547605 TOMM6Q96B49 74 aa15.3■□□□□ 0.04
RBFOX1-210ENST00000547605 CYSLTR1Q9Y271 337 aa15.3■□□□□ 0.04
RBFOX1-210ENST00000547605 PRSS1P07477 247 aa15.29■□□□□ 0.04
RBFOX1-210ENST00000547605 RPL39P62891 51 aaKnown RBP15.29■□□□□ 0.04
RBFOX1-210ENST00000547605 CTAG1AP78358 180 aa15.29■□□□□ 0.04
RBFOX1-210ENST00000547605 CHCHD7Q9BUK0 85 aa15.29■□□□□ 0.04
RBFOX1-210ENST00000547605 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.29■□□□□ 0.04
RBFOX1-210ENST00000547605 TMEM97Q5BJF2 176 aa15.29■□□□□ 0.04
RBFOX1-210ENST00000547605 C20orf203Q8NBC4 194 aa15.29■□□□□ 0.04
RBFOX1-210ENST00000547605 TRBV25-1A0A075B6N4 114 aa15.28■□□□□ 0.04
RBFOX1-210ENST00000547605 STAB2Q8WWQ8 2551 aa15.28■□□□□ 0.04
RBFOX1-210ENST00000547605 TRBV6-8A0A0A6YYG3 113 aa15.27■□□□□ 0.04
RBFOX1-210ENST00000547605 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.27■□□□□ 0.03
RBFOX1-210ENST00000547605 IGKV2-29A2NJV5 120 aaPredicted RBP15.27■□□□□ 0.03
RBFOX1-210ENST00000547605 M0R143 59 aa15.27■□□□□ 0.03
RBFOX1-210ENST00000547605 MAJINQ3KP22 176 aa15.27■□□□□ 0.03
RBFOX1-210ENST00000547605 SCGB3A1Q96QR1 104 aa15.27■□□□□ 0.03
RBFOX1-210ENST00000547605 IGLL5B9A064 214 aa15.26■□□□□ 0.03
RBFOX1-210ENST00000547605 Q6ZN92 141 aa15.26■□□□□ 0.03
RBFOX1-210ENST00000547605 TMEM243Q9BU79 118 aa15.26■□□□□ 0.03
RBFOX1-210ENST00000547605 PMCHL2Q9BQD1 86 aa15.25■□□□□ 0.03
RBFOX1-210ENST00000547605 TRAV12-1A0A0B4J245 112 aa15.24■□□□□ 0.03
RBFOX1-210ENST00000547605 hDV102S1A0JD36 115 aa15.24■□□□□ 0.03
RBFOX1-210ENST00000547605 UBE2L6O14933 153 aa15.24■□□□□ 0.03
RBFOX1-210ENST00000547605 HNRNPA3P51991 378 aaKnown RBP15.24■□□□□ 0.03
RBFOX1-210ENST00000547605 ODF1Q14990 250 aa15.24■□□□□ 0.03
RBFOX1-210ENST00000547605 ERASQ7Z444 233 aa15.24■□□□□ 0.03
RBFOX1-210ENST00000547605 C15orf53Q8NAA6 179 aa15.24■□□□□ 0.03
RBFOX1-210ENST00000547605 MRPS16Q9Y3D3 137 aaKnown RBP15.24■□□□□ 0.03
RBFOX1-210ENST00000547605 CHCHD5Q9BSY4 110 aa15.23■□□□□ 0.03
RBFOX1-210ENST00000547605 FBN3Q75N90 2809 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms