RNA–Protein interactions for RNA: ENST00000547381.1

SSH1-206, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-206ENST00000547381 SMR3BP02814 79 aaPredicted RBP8.13□□□□□ -1.11
SSH1-206ENST00000547381 SRP19P09132 144 aaKnown RBP8.13□□□□□ -1.11
SSH1-206ENST00000547381 Q6ZSA8 131 aa8.13□□□□□ -1.11
SSH1-206ENST00000547381 GFRA4Q9GZZ7 299 aa8.13□□□□□ -1.11
SSH1-206ENST00000547381 FAM30AQ9NZY2 134 aa8.13□□□□□ -1.11
SSH1-206ENST00000547381 TRAV8-4A0A0B4J246 113 aa8.12□□□□□ -1.11
SSH1-206ENST00000547381 HLA-DQA1P01909 254 aa8.12□□□□□ -1.11
SSH1-206ENST00000547381 AMTP48728 403 aa8.12□□□□□ -1.11
SSH1-206ENST00000547381 REG3AQ06141 175 aa8.12□□□□□ -1.11
SSH1-206ENST00000547381 FAM74A3Q4VXF1 159 aa8.12□□□□□ -1.11
SSH1-206ENST00000547381 TSKUQ8WUA8 353 aa8.12□□□□□ -1.11
SSH1-206ENST00000547381 OSTCQ9NRP0 149 aa8.12□□□□□ -1.11
SSH1-206ENST00000547381 MYCBP2O75592 4640 aa8.11□□□□□ -1.11
SSH1-206ENST00000547381 TRAV26-2A0A0B4J265 109 aa8.11□□□□□ -1.11
SSH1-206ENST00000547381 A0A1B0GUT8 65 aa8.11□□□□□ -1.11
SSH1-206ENST00000547381 NCR2O95944 276 aa8.11□□□□□ -1.11
SSH1-206ENST00000547381 HAMPP81172 84 aa8.11□□□□□ -1.11
SSH1-206ENST00000547381 CLPSL2Q6UWE3 100 aa8.11□□□□□ -1.11
SSH1-206ENST00000547381 HIGD1CA8MV81 97 aa8.1□□□□□ -1.11
SSH1-206ENST00000547381 USP17L23D6RBM5 183 aa8.1□□□□□ -1.11
SSH1-206ENST00000547381 INAFM2P0DMQ5 153 aa8.1□□□□□ -1.11
SSH1-206ENST00000547381 TMEM241Q24JQ0 296 aa8.1□□□□□ -1.11
SSH1-206ENST00000547381 C20orf203Q8NBC4 194 aa8.1□□□□□ -1.11
SSH1-206ENST00000547381 HERC1Q15751 4861 aa8.1□□□□□ -1.11
SSH1-206ENST00000547381 IGLV4-60A0A075B6I1 120 aa8.09□□□□□ -1.11
SSH1-206ENST00000547381 PEA15Q15121 130 aa8.09□□□□□ -1.11
SSH1-206ENST00000547381 LINC01620Q4KN68 170 aa8.09□□□□□ -1.11
SSH1-206ENST00000547381 DGAT2L7PQ6IED9 249 aa8.09□□□□□ -1.11
SSH1-206ENST00000547381 CLRN3Q8NCR9 226 aa8.09□□□□□ -1.11
SSH1-206ENST00000547381 RPL39LQ96EH5 51 aaKnown RBP8.09□□□□□ -1.11
SSH1-206ENST00000547381 TMEM191AQ9H0A3 160 aa8.09□□□□□ -1.11
SSH1-206ENST00000547381 SMDT1Q9H4I9 107 aa8.09□□□□□ -1.11
SSH1-206ENST00000547381 TRBV6-5A0A0K0K1A5 114 aa8.08□□□□□ -1.12
SSH1-206ENST00000547381 SDHAF1A6NFY7 115 aa8.08□□□□□ -1.12
SSH1-206ENST00000547381 H7C423 109 aa8.08□□□□□ -1.12
SSH1-206ENST00000547381 I3L3M4 83 aa8.08□□□□□ -1.12
SSH1-206ENST00000547381 RIGQ13278 110 aa8.08□□□□□ -1.12
SSH1-206ENST00000547381 KRTAP26-1Q6PEX3 210 aa8.08□□□□□ -1.12
SSH1-206ENST00000547381 DEFB104AQ8WTQ1 72 aa8.08□□□□□ -1.12
SSH1-206ENST00000547381 IGLV10-54A0A075B6I4 117 aa8.07□□□□□ -1.12
SSH1-206ENST00000547381 APCSP02743 223 aa8.07□□□□□ -1.12
SSH1-206ENST00000547381 PMCHP20382 165 aa8.07□□□□□ -1.12
SSH1-206ENST00000547381 AMMECR1LQ6DCA0 310 aa8.07□□□□□ -1.12
SSH1-206ENST00000547381 ISOC2Q96AB3 205 aa8.07□□□□□ -1.12
SSH1-206ENST00000547381 MRAP2Q96G30 205 aa8.07□□□□□ -1.12
SSH1-206ENST00000547381 CHAC1Q9BUX1 264 aa8.07□□□□□ -1.12
SSH1-206ENST00000547381 NAT8Q9UHE5 227 aa8.07□□□□□ -1.12
SSH1-206ENST00000547381 V9GYV3 84 aa8.07□□□□□ -1.12
SSH1-206ENST00000547381 PLA2G1BP04054 148 aaKnown RBP8.06□□□□□ -1.12
SSH1-206ENST00000547381 PRSS1P07477 247 aa8.06□□□□□ -1.12
SSH1-206ENST00000547381 RPL23P62829 140 aaKnown RBP8.06□□□□□ -1.12
SSH1-206ENST00000547381 ADIRFQ15847 76 aa8.06□□□□□ -1.12
SSH1-206ENST00000547381 NUP35Q8NFH5 326 aa8.06□□□□□ -1.12
SSH1-206ENST00000547381 ST20Q9HBF5 79 aa8.06□□□□□ -1.12
SSH1-206ENST00000547381 NAT8BQ9UHF3 227 aa8.06□□□□□ -1.12
SSH1-206ENST00000547381 DMBT1Q9UGM3 2413 aaPredicted RBP8.05□□□□□ -1.12
SSH1-206ENST00000547381 PPP1R17O96001 155 aa8.05□□□□□ -1.12
SSH1-206ENST00000547381 ZNF25P17030 456 aaPredicted RBP8.05□□□□□ -1.12
SSH1-206ENST00000547381 RAB4AP20338 218 aa8.05□□□□□ -1.12
SSH1-206ENST00000547381 SCXQ7RTU7 201 aa8.05□□□□□ -1.12
SSH1-206ENST00000547381 hDV102S1A0JD36 115 aa8.04□□□□□ -1.12
SSH1-206ENST00000547381 C9JQL5 133 aa8.04□□□□□ -1.12
SSH1-206ENST00000547381 RNASEKQ6P5S7 137 aaKnown RBP8.04□□□□□ -1.12
SSH1-206ENST00000547381 LINC00528Q8N1L1 170 aa8.04□□□□□ -1.12
SSH1-206ENST00000547381 C9orf163Q8N9P6 203 aa8.04□□□□□ -1.12
SSH1-206ENST00000547381 RNF185Q96GF1 192 aa8.04□□□□□ -1.12
SSH1-206ENST00000547381 BTF3L4Q96K17 158 aa8.04□□□□□ -1.12
SSH1-206ENST00000547381 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.03□□□□□ -1.12
SSH1-206ENST00000547381 TRBV27A0A0K0K1C4 114 aa8.03□□□□□ -1.12
SSH1-206ENST00000547381 SMIM27A0A1W2PRY6 76 aa8.03□□□□□ -1.12
SSH1-206ENST00000547381 IGKV2-29A2NJV5 120 aaPredicted RBP8.03□□□□□ -1.12
SSH1-206ENST00000547381 FGF6P10767 208 aa8.03□□□□□ -1.12
SSH1-206ENST00000547381 CNBPP62633 177 aaKnown RBP8.03□□□□□ -1.12
SSH1-206ENST00000547381 SRSF3P84103 164 aaKnown RBP8.03□□□□□ -1.12
SSH1-206ENST00000547381 CFAP161Q6P656 301 aa8.03□□□□□ -1.12
SSH1-206ENST00000547381 AMN1Q8IY45 258 aa8.03□□□□□ -1.12
SSH1-206ENST00000547381 CIRBP-AS1Q8TBR5 109 aa8.03□□□□□ -1.12
SSH1-206ENST00000547381 TMEM101Q96IK0 257 aa8.03□□□□□ -1.12
SSH1-206ENST00000547381 AP5S1Q9NUS5 200 aa8.03□□□□□ -1.12
SSH1-206ENST00000547381 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.02□□□□□ -1.13
SSH1-206ENST00000547381 A0A1B0GW15 77 aa8.02□□□□□ -1.13
SSH1-206ENST00000547381 VCYO14598 125 aa8.02□□□□□ -1.13
SSH1-206ENST00000547381 TSHBP01222 138 aa8.02□□□□□ -1.13
SSH1-206ENST00000547381 ESDP10768 282 aa8.02□□□□□ -1.13
SSH1-206ENST00000547381 POLR2KP53803 58 aaKnown RBP8.02□□□□□ -1.13
SSH1-206ENST00000547381 IGKV3OR2-268A0A0C4DH90 116 aa8.01□□□□□ -1.13
SSH1-206ENST00000547381 GAGE12HA6NDE8 117 aa8.01□□□□□ -1.13
SSH1-206ENST00000547381 GAS8-AS1O95177 125 aa8.01□□□□□ -1.13
SSH1-206ENST00000547381 RPS10P46783 165 aaKnown RBP8.01□□□□□ -1.13
SSH1-206ENST00000547381 OR5A1Q8NGJ0 315 aa8.01□□□□□ -1.13
SSH1-206ENST00000547381 TMEM242Q9NWH2 141 aa8.01□□□□□ -1.13
SSH1-206ENST00000547381 LINC00862A6NCI5 91 aa8□□□□□ -1.13
SSH1-206ENST00000547381 PPP1R2P9O14990 202 aa8□□□□□ -1.13
SSH1-206ENST00000547381 S100A8P05109 93 aa8□□□□□ -1.13
SSH1-206ENST00000547381 SUMO2P61956 95 aaKnown RBP8□□□□□ -1.13
SSH1-206ENST00000547381 SMAGPQ0VAQ4 97 aa8□□□□□ -1.13
SSH1-206ENST00000547381 FAM104BQ5XKR9 115 aa8□□□□□ -1.13
SSH1-206ENST00000547381 MRPL52Q86TS9 123 aaKnown RBP8□□□□□ -1.13
SSH1-206ENST00000547381 CHCHD10Q8WYQ3 142 aaPredicted RBP8□□□□□ -1.13
SSH1-206ENST00000547381 KIR2DL4Q99706 377 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms