RNA–Protein interactions for RNA: ENST00000547369.5

GCN1-203, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-203ENST00000547369 BIN3Q9NQY0 253 aa11.91□□□□□ -0.5
GCN1-203ENST00000547369 AP5S1Q9NUS5 200 aa11.91□□□□□ -0.5
GCN1-203ENST00000547369 MED9Q9NWA0 146 aa11.91□□□□□ -0.5
GCN1-203ENST00000547369 UBE2L6O14933 153 aa11.9□□□□□ -0.5
GCN1-203ENST00000547369 SULT1A2P50226 295 aa11.9□□□□□ -0.5
GCN1-203ENST00000547369 C9orf62Q8N4C0 152 aa11.9□□□□□ -0.5
GCN1-203ENST00000547369 IGHV3-64A0A075B6Q5 118 aa11.89□□□□□ -0.51
GCN1-203ENST00000547369 SLPIP03973 132 aa11.89□□□□□ -0.51
GCN1-203ENST00000547369 CTRLP40313 264 aa11.89□□□□□ -0.51
GCN1-203ENST00000547369 AMTP48728 403 aa11.89□□□□□ -0.51
GCN1-203ENST00000547369 COTL1Q14019 142 aa11.89□□□□□ -0.51
GCN1-203ENST00000547369 WDR73Q6P4I2 378 aa11.89□□□□□ -0.51
GCN1-203ENST00000547369 PLA2G2DQ9UNK4 145 aa11.89□□□□□ -0.51
GCN1-203ENST00000547369 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.88□□□□□ -0.51
GCN1-203ENST00000547369 NUDT10Q8NFP7 164 aa11.88□□□□□ -0.51
GCN1-203ENST00000547369 NUDT11Q96G61 164 aa11.88□□□□□ -0.51
GCN1-203ENST00000547369 HMCN2Q8NDA2 5059 aa11.87□□□□□ -0.51
GCN1-203ENST00000547369 BCL2P10415 239 aa11.87□□□□□ -0.51
GCN1-203ENST00000547369 DPH3Q96FX2 82 aa11.87□□□□□ -0.51
GCN1-203ENST00000547369 TWIST1Q15672 202 aa11.86□□□□□ -0.51
GCN1-203ENST00000547369 RNF185Q96GF1 192 aa11.86□□□□□ -0.51
GCN1-203ENST00000547369 CNFNQ9BYD5 112 aa11.86□□□□□ -0.51
GCN1-203ENST00000547369 A0A087WYN8 130 aa11.85□□□□□ -0.51
GCN1-203ENST00000547369 CHTF8P0CG12 524 aa11.85□□□□□ -0.51
GCN1-203ENST00000547369 GATD1Q8NB37 220 aa11.85□□□□□ -0.51
GCN1-203ENST00000547369 GAGE12HA6NDE8 117 aa11.84□□□□□ -0.51
GCN1-203ENST00000547369 Q6ZRU5 148 aa11.84□□□□□ -0.51
GCN1-203ENST00000547369 C15orf56Q8N910 161 aa11.84□□□□□ -0.51
GCN1-203ENST00000547369 SPACA4Q8TDM5 124 aa11.84□□□□□ -0.51
GCN1-203ENST00000547369 RPP21Q9H633 154 aaKnown RBP11.84□□□□□ -0.51
GCN1-203ENST00000547369 TRAV26-2A0A0B4J265 109 aa11.83□□□□□ -0.52
GCN1-203ENST00000547369 IGKV3OR2-268A0A0C4DH90 116 aa11.83□□□□□ -0.52
GCN1-203ENST00000547369 CFAP161Q6P656 301 aa11.83□□□□□ -0.52
GCN1-203ENST00000547369 RNASE7Q9H1E1 156 aaKnown RBP11.83□□□□□ -0.52
GCN1-203ENST00000547369 MT1HL1P0DM35 61 aa11.82□□□□□ -0.52
GCN1-203ENST00000547369 TAGLN2P37802 199 aaKnown RBP11.82□□□□□ -0.52
GCN1-203ENST00000547369 K7EN84 100 aa11.81□□□□□ -0.52
GCN1-203ENST00000547369 AMMECR1LQ6DCA0 310 aa11.81□□□□□ -0.52
GCN1-203ENST00000547369 Q6ZNX1 250 aa11.81□□□□□ -0.52
GCN1-203ENST00000547369 OCC1Q8TAD7 63 aa11.81□□□□□ -0.52
GCN1-203ENST00000547369 RPL39LQ96EH5 51 aaKnown RBP11.81□□□□□ -0.52
GCN1-203ENST00000547369 NCR2O95944 276 aa11.8□□□□□ -0.52
GCN1-203ENST00000547369 SLC51BQ86UW2 128 aa11.8□□□□□ -0.52
GCN1-203ENST00000547369 PLAC8Q9NZF1 115 aa11.8□□□□□ -0.52
GCN1-203ENST00000547369 RPS10P46783 165 aaKnown RBP11.79□□□□□ -0.52
GCN1-203ENST00000547369 COX6A2Q02221 97 aa11.79□□□□□ -0.52
GCN1-203ENST00000547369 HIGD2BQ4VC39 106 aa11.79□□□□□ -0.52
GCN1-203ENST00000547369 RNASEKQ6P5S7 137 aaKnown RBP11.79□□□□□ -0.52
GCN1-203ENST00000547369 SMIM15Q7Z3B0 74 aa11.79□□□□□ -0.52
GCN1-203ENST00000547369 GTSF1Q8WW33 167 aa11.79□□□□□ -0.52
GCN1-203ENST00000547369 CHCHD10Q8WYQ3 142 aaPredicted RBP11.79□□□□□ -0.52
GCN1-203ENST00000547369 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.78□□□□□ -0.52
GCN1-203ENST00000547369 IGKV2-29A2NJV5 120 aaPredicted RBP11.78□□□□□ -0.52
GCN1-203ENST00000547369 H7C423 109 aa11.78□□□□□ -0.52
GCN1-203ENST00000547369 APCSP02743 223 aa11.78□□□□□ -0.52
GCN1-203ENST00000547369 FOXA3P55318 350 aaPredicted RBP11.78□□□□□ -0.52
GCN1-203ENST00000547369 TCTE3Q8IZS6 198 aa11.78□□□□□ -0.52
GCN1-203ENST00000547369 SDHAF1A6NFY7 115 aa11.77□□□□□ -0.53
GCN1-203ENST00000547369 PHOX2AO14813 284 aa11.77□□□□□ -0.53
GCN1-203ENST00000547369 NDUFS6O75380 124 aaKnown RBP11.77□□□□□ -0.53
GCN1-203ENST00000547369 FGF6P10767 208 aa11.77□□□□□ -0.53
GCN1-203ENST00000547369 TEX261Q6UWH6 196 aa11.77□□□□□ -0.53
GCN1-203ENST00000547369 C7orf33Q8WU49 177 aa11.77□□□□□ -0.53
GCN1-203ENST00000547369 PRSS3P2Q8NHM4 247 aa11.76□□□□□ -0.53
GCN1-203ENST00000547369 GVQW2A0A096LPI5 108 aaPredicted RBP11.75□□□□□ -0.53
GCN1-203ENST00000547369 GATCO43716 136 aaKnown RBP11.75□□□□□ -0.53
GCN1-203ENST00000547369 MAJINQ3KP22 176 aa11.75□□□□□ -0.53
GCN1-203ENST00000547369 IGKV2-24A0A0C4DH68 120 aa11.74□□□□□ -0.53
GCN1-203ENST00000547369 ZNF25P17030 456 aaPredicted RBP11.74□□□□□ -0.53
GCN1-203ENST00000547369 FAM231BA6NCW3 169 aa11.73□□□□□ -0.53
GCN1-203ENST00000547369 A8MWL6 223 aa11.73□□□□□ -0.53
GCN1-203ENST00000547369 I3L3M4 83 aa11.73□□□□□ -0.53
GCN1-203ENST00000547369 PMCHP20382 165 aa11.73□□□□□ -0.53
GCN1-203ENST00000547369 FOXI1Q12951 378 aa11.73□□□□□ -0.53
GCN1-203ENST00000547369 UBR4Q5T4S7 5183 aa11.73□□□□□ -0.53
GCN1-203ENST00000547369 FAM231DQ6ZW35 169 aa11.73□□□□□ -0.53
GCN1-203ENST00000547369 OR5A1Q8NGJ0 315 aa11.73□□□□□ -0.53
GCN1-203ENST00000547369 TRBV6-5A0A0K0K1A5 114 aa11.72□□□□□ -0.53
GCN1-203ENST00000547369 TMEM250H0YL14 139 aa11.72□□□□□ -0.53
GCN1-203ENST00000547369 BTF3L4Q96K17 158 aa11.72□□□□□ -0.53
GCN1-203ENST00000547369 XCL1P47992 114 aa11.71□□□□□ -0.53
GCN1-203ENST00000547369 STPG4Q8N801 248 aa11.71□□□□□ -0.53
GCN1-203ENST00000547369 TMEM101Q96IK0 257 aa11.71□□□□□ -0.53
GCN1-203ENST00000547369 A0A096LNI7 61 aa11.7□□□□□ -0.54
GCN1-203ENST00000547369 ESDP10768 282 aa11.7□□□□□ -0.54
GCN1-203ENST00000547369 CT83Q5H943 113 aa11.7□□□□□ -0.54
GCN1-203ENST00000547369 LINC00959A0A1B0GUT2 108 aa11.69□□□□□ -0.54
GCN1-203ENST00000547369 CCL25O15444 150 aa11.69□□□□□ -0.54
GCN1-203ENST00000547369 GAS8-AS1O95177 125 aa11.69□□□□□ -0.54
GCN1-203ENST00000547369 TSHBP01222 138 aa11.69□□□□□ -0.54
GCN1-203ENST00000547369 BLOC1S1P78537 153 aa11.69□□□□□ -0.54
GCN1-203ENST00000547369 PRR3P79522 188 aaKnown RBP11.69□□□□□ -0.54
GCN1-203ENST00000547369 LYPD6BQ8NI32 183 aa11.69□□□□□ -0.54
GCN1-203ENST00000547369 BORCS7Q96B45 105 aa11.69□□□□□ -0.54
GCN1-203ENST00000547369 ST20Q9HBF5 79 aa11.69□□□□□ -0.54
GCN1-203ENST00000547369 TMEM242Q9NWH2 141 aa11.69□□□□□ -0.54
GCN1-203ENST00000547369 IGHV1-58A0A0C4DH39 117 aa11.68□□□□□ -0.54
GCN1-203ENST00000547369 MRAP2Q96G30 205 aa11.68□□□□□ -0.54
GCN1-203ENST00000547369 CEBPGP53567 150 aa11.67□□□□□ -0.54
GCN1-203ENST00000547369 ALKAL2Q6UX46 152 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms