RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 ZC2HC1BQ5TFG8 222 aa12.44□□□□□ -0.42
RBFOX1-207ENST00000547338 JPT2Q9H910 190 aa12.44□□□□□ -0.42
RBFOX1-207ENST00000547338 MUC4Q99102 2169 aa12.44□□□□□ -0.42
RBFOX1-207ENST00000547338 NMUP48645 174 aa12.43□□□□□ -0.42
RBFOX1-207ENST00000547338 A6NDN8 102 aa12.42□□□□□ -0.42
RBFOX1-207ENST00000547338 I3L3M4 83 aa12.42□□□□□ -0.42
RBFOX1-207ENST00000547338 NPSP0C0P6 89 aa12.42□□□□□ -0.42
RBFOX1-207ENST00000547338 FAM74A4Q5TZK3 123 aa12.42□□□□□ -0.42
RBFOX1-207ENST00000547338 BAALCQ8WXS3 180 aa12.42□□□□□ -0.42
RBFOX1-207ENST00000547338 IGIPA6NJ69 53 aa12.42□□□□□ -0.42
RBFOX1-207ENST00000547338 C3orf84H3BNL1 204 aa12.42□□□□□ -0.42
RBFOX1-207ENST00000547338 RBMY1A1P0DJD3 496 aaKnown RBP12.42□□□□□ -0.42
RBFOX1-207ENST00000547338 RBMY1CP0DJD4 496 aa12.42□□□□□ -0.42
RBFOX1-207ENST00000547338 RBMY1FQ15415 496 aaKnown RBP12.42□□□□□ -0.42
RBFOX1-207ENST00000547338 CASC10Q5T4H9 136 aa12.42□□□□□ -0.42
RBFOX1-207ENST00000547338 STHQ8IWL8 128 aa12.42□□□□□ -0.42
RBFOX1-207ENST00000547338 LINC01587Q99440 93 aa12.42□□□□□ -0.42
RBFOX1-207ENST00000547338 OVOL2Q9BRP0 275 aa12.42□□□□□ -0.42
RBFOX1-207ENST00000547338 PMVKQ15126 192 aa12.41□□□□□ -0.42
RBFOX1-207ENST00000547338 TAL2Q16559 108 aa12.41□□□□□ -0.42
RBFOX1-207ENST00000547338 DNAJC30Q96LL9 226 aa12.41□□□□□ -0.42
RBFOX1-207ENST00000547338 CRYBA4P53673 196 aa12.4□□□□□ -0.42
RBFOX1-207ENST00000547338 PRSS29PA6NIE9 313 aa12.39□□□□□ -0.43
RBFOX1-207ENST00000547338 TP53TG1Q9Y2A0 90 aa12.39□□□□□ -0.43
RBFOX1-207ENST00000547338 RPL35AP18077 110 aaKnown RBP12.38□□□□□ -0.43
RBFOX1-207ENST00000547338 UFSP1Q6NVU6 142 aa12.38□□□□□ -0.43
RBFOX1-207ENST00000547338 PCP2Q8IVA1 136 aa12.38□□□□□ -0.43
RBFOX1-207ENST00000547338 MORN3Q6PF18 240 aaPredicted RBP12.37□□□□□ -0.43
RBFOX1-207ENST00000547338 AGRNO00468 2067 aa12.37□□□□□ -0.43
RBFOX1-207ENST00000547338 E9PLD3 99 aa12.37□□□□□ -0.43
RBFOX1-207ENST00000547338 H3BRM9 83 aa12.37□□□□□ -0.43
RBFOX1-207ENST00000547338 TAX1BP3O14907 124 aa12.37□□□□□ -0.43
RBFOX1-207ENST00000547338 HERVK_113P61574 105 aa12.37□□□□□ -0.43
RBFOX1-207ENST00000547338 DEFB135Q30KP9 77 aa12.37□□□□□ -0.43
RBFOX1-207ENST00000547338 C11orf72Q8NBR9 251 aa12.37□□□□□ -0.43
RBFOX1-207ENST00000547338 KIR2DL5BQ8NHK3 375 aa12.37□□□□□ -0.43
RBFOX1-207ENST00000547338 PYGO1Q9Y3Y4 419 aa12.37□□□□□ -0.43
RBFOX1-207ENST00000547338 RS1O15537 224 aa12.36□□□□□ -0.43
RBFOX1-207ENST00000547338 ZFAND6Q6FIF0 208 aa12.36□□□□□ -0.43
RBFOX1-207ENST00000547338 C20orf203Q8NBC4 194 aa12.36□□□□□ -0.43
RBFOX1-207ENST00000547338 OR11H2Q8NH07 326 aa12.36□□□□□ -0.43
RBFOX1-207ENST00000547338 CST9LQ9H4G1 147 aa12.36□□□□□ -0.43
RBFOX1-207ENST00000547338 TNFRSF18Q9Y5U5 241 aa12.36□□□□□ -0.43
RBFOX1-207ENST00000547338 SACSQ9NZJ4 4579 aa12.35□□□□□ -0.43
RBFOX1-207ENST00000547338 IGKV2D-26A0A0A0MRZ7 120 aa12.35□□□□□ -0.43
RBFOX1-207ENST00000547338 CIDEAO60543 219 aa12.35□□□□□ -0.43
RBFOX1-207ENST00000547338 APOC4P55056 127 aa12.35□□□□□ -0.43
RBFOX1-207ENST00000547338 UBE2V1Q13404 147 aa12.35□□□□□ -0.43
RBFOX1-207ENST00000547338 C1QTNF4Q9BXJ3 329 aa12.35□□□□□ -0.43
RBFOX1-207ENST00000547338 LYSTQ99698 3801 aa12.34□□□□□ -0.43
RBFOX1-207ENST00000547338 TRBV25-1A0A075B6N4 114 aa12.34□□□□□ -0.43
RBFOX1-207ENST00000547338 TSHBP01222 138 aa12.34□□□□□ -0.43
RBFOX1-207ENST00000547338 IGHV3-53P01767 116 aa12.34□□□□□ -0.43
RBFOX1-207ENST00000547338 CFAP126Q5VTH2 177 aa12.34□□□□□ -0.43
RBFOX1-207ENST00000547338 HTN1P15515 57 aa12.33□□□□□ -0.44
RBFOX1-207ENST00000547338 NEGR1Q7Z3B1 354 aa12.33□□□□□ -0.44
RBFOX1-207ENST00000547338 RNF183Q96D59 192 aa12.33□□□□□ -0.44
RBFOX1-207ENST00000547338 TM2D2Q9BX73 214 aa12.33□□□□□ -0.44
RBFOX1-207ENST00000547338 TP73-AS1Q9UF72 201 aa12.33□□□□□ -0.44
RBFOX1-207ENST00000547338 RYR2Q92736 4967 aa12.33□□□□□ -0.44
RBFOX1-207ENST00000547338 C11orf86A6NJI1 115 aa12.32□□□□□ -0.44
RBFOX1-207ENST00000547338 GIG44P09565 113 aaPredicted RBP12.32□□□□□ -0.44
RBFOX1-207ENST00000547338 CHAC1Q9BUX1 264 aa12.32□□□□□ -0.44
RBFOX1-207ENST00000547338 MYMXA0A1B0GTQ4 84 aa12.32□□□□□ -0.44
RBFOX1-207ENST00000547338 NFE4Q86UQ8 179 aa12.32□□□□□ -0.44
RBFOX1-207ENST00000547338 IL17DQ8TAD2 202 aa12.32□□□□□ -0.44
RBFOX1-207ENST00000547338 P0DMU3 169 aa12.31□□□□□ -0.44
RBFOX1-207ENST00000547338 FAM231AP0DMU4 169 aa12.31□□□□□ -0.44
RBFOX1-207ENST00000547338 FAM231CP0DMU5 169 aa12.31□□□□□ -0.44
RBFOX1-207ENST00000547338 PTTG1IPP53801 180 aa12.31□□□□□ -0.44
RBFOX1-207ENST00000547338 C1orf158Q8N1D5 194 aa12.31□□□□□ -0.44
RBFOX1-207ENST00000547338 TMEM263Q8WUH6 116 aaKnown RBP12.3□□□□□ -0.44
RBFOX1-207ENST00000547338 IGLV4-69A0A075B6H9 119 aa12.29□□□□□ -0.44
RBFOX1-207ENST00000547338 TRAV8-6A0A0B4J262 113 aa12.29□□□□□ -0.44
RBFOX1-207ENST00000547338 A0A0J9YWU9 116 aa12.29□□□□□ -0.44
RBFOX1-207ENST00000547338 C9orf118A6NHY6 69 aa12.29□□□□□ -0.44
RBFOX1-207ENST00000547338 SMIM13P0DJ93 91 aa12.29□□□□□ -0.44
RBFOX1-207ENST00000547338 RPL39P62891 51 aaKnown RBP12.29□□□□□ -0.44
RBFOX1-207ENST00000547338 VAMP3Q15836 100 aa12.29□□□□□ -0.44
RBFOX1-207ENST00000547338 XCL2Q9UBD3 114 aa12.29□□□□□ -0.44
RBFOX1-207ENST00000547338 TRBV10-1A0A0K0K1A3 114 aa12.28□□□□□ -0.44
RBFOX1-207ENST00000547338 DAZ2Q13117 558 aaKnown RBP12.28□□□□□ -0.44
RBFOX1-207ENST00000547338 CEND1Q8N111 149 aa12.28□□□□□ -0.44
RBFOX1-207ENST00000547338 VCX2Q9H322 139 aa12.28□□□□□ -0.44
RBFOX1-207ENST00000547338 SPANXA1Q9NS26 97 aa12.28□□□□□ -0.44
RBFOX1-207ENST00000547338 MAPKAPK5-AS1Q8N8E1 139 aa12.27□□□□□ -0.44
RBFOX1-207ENST00000547338 RNASE8Q8TDE3 154 aaKnown RBP12.27□□□□□ -0.44
RBFOX1-207ENST00000547338 DNAH1Q9P2D7 4330 aa12.27□□□□□ -0.44
RBFOX1-207ENST00000547338 SMAGPQ0VAQ4 97 aa12.27□□□□□ -0.45
RBFOX1-207ENST00000547338 PLECQ15149 4684 aaKnown RBP12.27□□□□□ -0.45
RBFOX1-207ENST00000547338 PRADC1Q9BSG0 188 aa12.27□□□□□ -0.45
RBFOX1-207ENST00000547338 AZU1P20160 251 aa12.26□□□□□ -0.45
RBFOX1-207ENST00000547338 TCTAP57738 103 aa12.26□□□□□ -0.45
RBFOX1-207ENST00000547338 OR4C5Q8NGB2 326 aa12.26□□□□□ -0.45
RBFOX1-207ENST00000547338 C16orf74Q96GX8 76 aa12.26□□□□□ -0.45
RBFOX1-207ENST00000547338 TRAV4A0A0B4J268 109 aa12.25□□□□□ -0.45
RBFOX1-207ENST00000547338 AMELXQ99217 191 aa12.25□□□□□ -0.45
RBFOX1-207ENST00000547338 TIMM21Q9BVV7 248 aa12.25□□□□□ -0.45
RBFOX1-207ENST00000547338 ALMS1Q8TCU4 4167 aa12.24□□□□□ -0.45
RBFOX1-207ENST00000547338 IGLV4-3A0A075B6K6 122 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms