RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, humanhuman

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-205ENST00000546983 ATRAIDQ6UW56 229 aa17.07■□□□□ 0.32
NKX2-1-205ENST00000546983 TMEM242Q9NWH2 141 aa17.07■□□□□ 0.32
NKX2-1-205ENST00000546983 TRBV27A0A0K0K1C4 114 aa17.06■□□□□ 0.32
NKX2-1-205ENST00000546983 VCYO14598 125 aa17.06■□□□□ 0.32
NKX2-1-205ENST00000546983 CKS2P33552 79 aa17.06■□□□□ 0.32
NKX2-1-205ENST00000546983 MPV17L2Q567V2 206 aa17.06■□□□□ 0.32
NKX2-1-205ENST00000546983 C20orf78Q9BR46 151 aa17.06■□□□□ 0.32
NKX2-1-205ENST00000546983 TMEM70Q9BUB7 260 aa17.06■□□□□ 0.32
NKX2-1-205ENST00000546983 PHOX2AO14813 284 aa17.05■□□□□ 0.32
NKX2-1-205ENST00000546983 SMAGPQ0VAQ4 97 aa17.05■□□□□ 0.32
NKX2-1-205ENST00000546983 GAGE6Q13070 117 aa17.05■□□□□ 0.32
NKX2-1-205ENST00000546983 MIAQ16674 131 aa17.05■□□□□ 0.32
NKX2-1-205ENST00000546983 NDUFA5Q16718 116 aa17.05■□□□□ 0.32
NKX2-1-205ENST00000546983 MRPL51Q4U2R6 128 aaKnown RBP17.05■□□□□ 0.32
NKX2-1-205ENST00000546983 C10orf91Q5T1B1 145 aa17.05■□□□□ 0.32
NKX2-1-205ENST00000546983 UBE2WQ96B02 151 aa17.05■□□□□ 0.32
NKX2-1-205ENST00000546983 KIR2DL4Q99706 377 aa17.05■□□□□ 0.32
NKX2-1-205ENST00000546983 PGPEP1Q9NXJ5 209 aa17.05■□□□□ 0.32
NKX2-1-205ENST00000546983 CARHSP1Q9Y2V2 147 aaKnown RBP17.05■□□□□ 0.32
NKX2-1-205ENST00000546983 TRBV24-1A0A075B6N3 115 aa17.04■□□□□ 0.32
NKX2-1-205ENST00000546983 S100PP25815 95 aa17.04■□□□□ 0.32
NKX2-1-205ENST00000546983 POLR2KP53803 58 aaKnown RBP17.04■□□□□ 0.32
NKX2-1-205ENST00000546983 SUMO2P61956 95 aaKnown RBP17.04■□□□□ 0.32
NKX2-1-205ENST00000546983 RBX1P62877 108 aa17.04■□□□□ 0.32
NKX2-1-205ENST00000546983 CDPF1Q6NVV7 123 aa17.04■□□□□ 0.32
NKX2-1-205ENST00000546983 RPL32P62910 135 aaKnown RBP17.03■□□□□ 0.32
NKX2-1-205ENST00000546983 RHEBQ15382 184 aa17.03■□□□□ 0.32
NKX2-1-205ENST00000546983 Q8N3U1 123 aa17.03■□□□□ 0.32
NKX2-1-205ENST00000546983 A0A087WTM6 91 aa17.02■□□□□ 0.32
NKX2-1-205ENST00000546983 C1orf43Q9BWL3 253 aa17.02■□□□□ 0.32
NKX2-1-205ENST00000546983 ZNF25P17030 456 aaPredicted RBP17.01■□□□□ 0.31
NKX2-1-205ENST00000546983 AMMECR1LQ6DCA0 310 aa17.01■□□□□ 0.31
NKX2-1-205ENST00000546983 PRR34Q9NV39 138 aa17.01■□□□□ 0.31
NKX2-1-205ENST00000546983 LAMTOR2Q9Y2Q5 125 aa17.01■□□□□ 0.31
NKX2-1-205ENST00000546983 DNAH10Q8IVF4 4471 aa17■□□□□ 0.31
NKX2-1-205ENST00000546983 FCER1GP30273 86 aa17■□□□□ 0.31
NKX2-1-205ENST00000546983 RPS10P46783 165 aaKnown RBP17■□□□□ 0.31
NKX2-1-205ENST00000546983 ORMDL3Q8N138 153 aa17■□□□□ 0.31
NKX2-1-205ENST00000546983 NRACQ8N912 160 aa17■□□□□ 0.31
NKX2-1-205ENST00000546983 Q8N976 141 aa17■□□□□ 0.31
NKX2-1-205ENST00000546983 IGKV2D-24A0A075B6R9 120 aa16.99■□□□□ 0.31
NKX2-1-205ENST00000546983 TRAV8-4A0A0B4J246 113 aa16.98■□□□□ 0.31
NKX2-1-205ENST00000546983 COX19Q49B96 90 aa16.98■□□□□ 0.31
NKX2-1-205ENST00000546983 SPATA12Q7Z6I5 190 aa16.98■□□□□ 0.31
NKX2-1-205ENST00000546983 TMEM18Q96B42 140 aa16.98■□□□□ 0.31
NKX2-1-205ENST00000546983 FRAS1Q86XX4 4008 aa16.98■□□□□ 0.31
NKX2-1-205ENST00000546983 D6R8Y8 96 aa16.97■□□□□ 0.31
NKX2-1-205ENST00000546983 NTN5Q8WTR8 489 aaPredicted RBP16.97■□□□□ 0.31
NKX2-1-205ENST00000546983 TMEM101Q96IK0 257 aa16.97■□□□□ 0.31
NKX2-1-205ENST00000546983 C16orf90A8MZG2 172 aa16.96■□□□□ 0.31
NKX2-1-205ENST00000546983 SMKR1H3BMG3 65 aa16.96■□□□□ 0.31
NKX2-1-205ENST00000546983 TNFRSF6BO95407 300 aa16.96■□□□□ 0.31
NKX2-1-205ENST00000546983 ENHOQ6UWT2 76 aa16.96■□□□□ 0.31
NKX2-1-205ENST00000546983 TMEM136Q6ZRR5 245 aa16.96■□□□□ 0.31
NKX2-1-205ENST00000546983 LINC00269Q8N2A0 174 aa16.96■□□□□ 0.31
NKX2-1-205ENST00000546983 CLRN3Q8NCR9 226 aa16.96■□□□□ 0.31
NKX2-1-205ENST00000546983 C7orf77A4D0Y5 90 aa16.95■□□□□ 0.3
NKX2-1-205ENST00000546983 GAS8-AS1O95177 125 aa16.95■□□□□ 0.3
NKX2-1-205ENST00000546983 TSHBP01222 138 aa16.95■□□□□ 0.3
NKX2-1-205ENST00000546983 ESDP10768 282 aa16.95■□□□□ 0.3
NKX2-1-205ENST00000546983 REG3AQ06141 175 aa16.95■□□□□ 0.3
NKX2-1-205ENST00000546983 SVBPQ8N300 66 aa16.95■□□□□ 0.3
NKX2-1-205ENST00000546983 DNAH2Q9P225 4427 aa16.94■□□□□ 0.3
NKX2-1-205ENST00000546983 SNAPINO95295 136 aa16.94■□□□□ 0.3
NKX2-1-205ENST00000546983 LRCOL1A6NCL2 159 aa16.93■□□□□ 0.3
NKX2-1-205ENST00000546983 C14orf177Q52M58 125 aa16.93■□□□□ 0.3
NKX2-1-205ENST00000546983 RNASEKQ6P5S7 137 aaKnown RBP16.93■□□□□ 0.3
NKX2-1-205ENST00000546983 C20orf203Q8NBC4 194 aa16.93■□□□□ 0.3
NKX2-1-205ENST00000546983 PRELID3AQ96N28 172 aa16.93■□□□□ 0.3
NKX2-1-205ENST00000546983 RPS10P5Q9NQ39 176 aa16.93■□□□□ 0.3
NKX2-1-205ENST00000546983 FGF6P10767 208 aa16.92■□□□□ 0.3
NKX2-1-205ENST00000546983 SMIM2Q9BVW6 85 aa16.92■□□□□ 0.3
NKX2-1-205ENST00000546983 MRPL52Q86TS9 123 aaKnown RBP16.91■□□□□ 0.3
NKX2-1-205ENST00000546983 HECTD4Q9Y4D8 3996 aa16.91■□□□□ 0.3
NKX2-1-205ENST00000546983 HLA-DQA1P01909 254 aa16.9■□□□□ 0.3
NKX2-1-205ENST00000546983 Q8N814 137 aa16.9■□□□□ 0.3
NKX2-1-205ENST00000546983 IGLV4-60A0A075B6I1 120 aa16.89■□□□□ 0.29
NKX2-1-205ENST00000546983 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.89■□□□□ 0.29
NKX2-1-205ENST00000546983 IGKV2-29A2NJV5 120 aaPredicted RBP16.89■□□□□ 0.29
NKX2-1-205ENST00000546983 PRSS47A8MTI9 375 aa16.89■□□□□ 0.29
NKX2-1-205ENST00000546983 APOC3P02656 99 aa16.89■□□□□ 0.29
NKX2-1-205ENST00000546983 RAB5AP20339 215 aa16.89■□□□□ 0.29
NKX2-1-205ENST00000546983 OR5A1Q8NGJ0 315 aa16.89■□□□□ 0.29
NKX2-1-205ENST00000546983 DEFB104AQ8WTQ1 72 aa16.89■□□□□ 0.29
NKX2-1-205ENST00000546983 CSDC2Q9Y534 153 aaKnown RBP16.89■□□□□ 0.29
NKX2-1-205ENST00000546983 DNAH17Q9UFH2 4485 aa16.88■□□□□ 0.29
NKX2-1-205ENST00000546983 EPPK1P58107 5090 aaKnown RBP16.88■□□□□ 0.29
NKX2-1-205ENST00000546983 NPYP01303 97 aa16.88■□□□□ 0.29
NKX2-1-205ENST00000546983 DGAT2L7PQ6IED9 249 aa16.88■□□□□ 0.29
NKX2-1-205ENST00000546983 FAT2Q9NYQ8 4349 aa16.87■□□□□ 0.29
NKX2-1-205ENST00000546983 MT-ND6P03923 174 aa16.87■□□□□ 0.29
NKX2-1-205ENST00000546983 GNB1LQ9BYB4 327 aa16.87■□□□□ 0.29
NKX2-1-205ENST00000546983 MAP1LC3AQ9H492 121 aa16.87■□□□□ 0.29
NKX2-1-205ENST00000546983 K7EMI3 77 aa16.86■□□□□ 0.29
NKX2-1-205ENST00000546983 KRTAP10-2P60368 255 aa16.86■□□□□ 0.29
NKX2-1-205ENST00000546983 TIMM21Q9BVV7 248 aa16.86■□□□□ 0.29
NKX2-1-205ENST00000546983 CLPSL2Q6UWE3 100 aa16.84■□□□□ 0.29
NKX2-1-205ENST00000546983 BAALCQ8WXS3 180 aa16.84■□□□□ 0.29
NKX2-1-205ENST00000546983 IGLV5-52A0A0A0MRZ9 124 aa16.83■□□□□ 0.28
NKX2-1-205ENST00000546983 CCL25O15444 150 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms