RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 TMEM262E9PQX1 116 aa9.72□□□□□ -0.85
DDX54-203ENST00000546869 H7C423 109 aa9.72□□□□□ -0.85
DDX54-203ENST00000546869 VCYO14598 125 aa9.72□□□□□ -0.85
DDX54-203ENST00000546869 PHOX2AO14813 284 aa9.72□□□□□ -0.85
DDX54-203ENST00000546869 CKS2P33552 79 aa9.72□□□□□ -0.85
DDX54-203ENST00000546869 SVBPQ8N300 66 aa9.72□□□□□ -0.85
DDX54-203ENST00000546869 Q8N3U1 123 aa9.72□□□□□ -0.85
DDX54-203ENST00000546869 TMEM243Q9BU79 118 aa9.72□□□□□ -0.85
DDX54-203ENST00000546869 DNAH17Q9UFH2 4485 aa9.72□□□□□ -0.85
DDX54-203ENST00000546869 SMKR1H3BMG3 65 aa9.71□□□□□ -0.86
DDX54-203ENST00000546869 SNAPINO95295 136 aa9.71□□□□□ -0.86
DDX54-203ENST00000546869 APOC3P02656 99 aa9.71□□□□□ -0.86
DDX54-203ENST00000546869 PMCHP20382 165 aa9.71□□□□□ -0.86
DDX54-203ENST00000546869 S100PP25815 95 aa9.71□□□□□ -0.86
DDX54-203ENST00000546869 SUMO2P61956 95 aaKnown RBP9.71□□□□□ -0.86
DDX54-203ENST00000546869 TNP2Q05952 138 aa9.71□□□□□ -0.86
DDX54-203ENST00000546869 MPV17L2Q567V2 206 aa9.71□□□□□ -0.86
DDX54-203ENST00000546869 ATRAIDQ6UW56 229 aa9.71□□□□□ -0.86
DDX54-203ENST00000546869 RPS10P5Q9NQ39 176 aa9.71□□□□□ -0.86
DDX54-203ENST00000546869 AMTP48728 403 aa9.7□□□□□ -0.86
DDX54-203ENST00000546869 Q0VG73 95 aa9.7□□□□□ -0.86
DDX54-203ENST00000546869 TM2D2Q9BX73 214 aa9.7□□□□□ -0.86
DDX54-203ENST00000546869 COX11Q9Y6N1 276 aa9.7□□□□□ -0.86
DDX54-203ENST00000546869 PRSS47A8MTI9 375 aa9.69□□□□□ -0.86
DDX54-203ENST00000546869 D6R8Y8 96 aa9.69□□□□□ -0.86
DDX54-203ENST00000546869 TNFRSF6BO95407 300 aa9.69□□□□□ -0.86
DDX54-203ENST00000546869 APCSP02743 223 aa9.69□□□□□ -0.86
DDX54-203ENST00000546869 ESDP10768 282 aa9.69□□□□□ -0.86
DDX54-203ENST00000546869 RBX1P62877 108 aa9.69□□□□□ -0.86
DDX54-203ENST00000546869 GAGE6Q13070 117 aa9.69□□□□□ -0.86
DDX54-203ENST00000546869 COX19Q49B96 90 aa9.69□□□□□ -0.86
DDX54-203ENST00000546869 TMEM136Q6ZRR5 245 aa9.69□□□□□ -0.86
DDX54-203ENST00000546869 ORMDL3Q8N138 153 aa9.69□□□□□ -0.86
DDX54-203ENST00000546869 KLK12Q9UKR0 248 aa9.69□□□□□ -0.86
DDX54-203ENST00000546869 LAMTOR2Q9Y2Q5 125 aa9.69□□□□□ -0.86
DDX54-203ENST00000546869 FRAS1Q86XX4 4008 aa9.68□□□□□ -0.86
DDX54-203ENST00000546869 TCAPO15273 167 aa9.68□□□□□ -0.86
DDX54-203ENST00000546869 TSHBP01222 138 aa9.68□□□□□ -0.86
DDX54-203ENST00000546869 RMI2Q96E14 147 aa9.68□□□□□ -0.86
DDX54-203ENST00000546869 KIR2DL4Q99706 377 aa9.68□□□□□ -0.86
DDX54-203ENST00000546869 PRR34Q9NV39 138 aa9.68□□□□□ -0.86
DDX54-203ENST00000546869 UBE2L6O14933 153 aa9.67□□□□□ -0.86
DDX54-203ENST00000546869 ENHOQ6UWT2 76 aa9.67□□□□□ -0.86
DDX54-203ENST00000546869 Q8N976 141 aa9.67□□□□□ -0.86
DDX54-203ENST00000546869 GNB1LQ9BYB4 327 aa9.67□□□□□ -0.86
DDX54-203ENST00000546869 FAT2Q9NYQ8 4349 aa9.67□□□□□ -0.86
DDX54-203ENST00000546869 ANGP03950 147 aaKnown RBP9.66□□□□□ -0.86
DDX54-203ENST00000546869 MIAQ16674 131 aa9.66□□□□□ -0.86
DDX54-203ENST00000546869 C20orf203Q8NBC4 194 aa9.66□□□□□ -0.86
DDX54-203ENST00000546869 PRELID3AQ96N28 172 aa9.66□□□□□ -0.86
DDX54-203ENST00000546869 Q9HAA7 133 aa9.66□□□□□ -0.86
DDX54-203ENST00000546869 NPYP01303 97 aa9.65□□□□□ -0.86
DDX54-203ENST00000546869 HLA-DQA1P01909 254 aa9.65□□□□□ -0.86
DDX54-203ENST00000546869 ZNF25P17030 456 aaPredicted RBP9.65□□□□□ -0.86
DDX54-203ENST00000546869 DEFB104AQ8WTQ1 72 aa9.65□□□□□ -0.86
DDX54-203ENST00000546869 UBE2WQ96B02 151 aa9.65□□□□□ -0.86
DDX54-203ENST00000546869 SMIM2Q9BVW6 85 aa9.65□□□□□ -0.86
DDX54-203ENST00000546869 EPPK1P58107 5090 aaKnown RBP9.65□□□□□ -0.86
DDX54-203ENST00000546869 EREGO14944 169 aa9.64□□□□□ -0.87
DDX54-203ENST00000546869 PSCAO43653 123 aa9.64□□□□□ -0.87
DDX54-203ENST00000546869 CRPP02741 224 aa9.64□□□□□ -0.87
DDX54-203ENST00000546869 FCER1GP30273 86 aa9.64□□□□□ -0.87
DDX54-203ENST00000546869 MRPL52Q86TS9 123 aaKnown RBP9.64□□□□□ -0.87
DDX54-203ENST00000546869 SLC7A5P1Q8MH63 180 aa9.64□□□□□ -0.87
DDX54-203ENST00000546869 LINC00269Q8N2A0 174 aa9.64□□□□□ -0.87
DDX54-203ENST00000546869 IGLV4-60A0A075B6I1 120 aa9.63□□□□□ -0.87
DDX54-203ENST00000546869 A0A087WTM6 91 aa9.63□□□□□ -0.87
DDX54-203ENST00000546869 LRCOL1A6NCL2 159 aa9.63□□□□□ -0.87
DDX54-203ENST00000546869 MT-ND6P03923 174 aa9.63□□□□□ -0.87
DDX54-203ENST00000546869 FGF6P10767 208 aa9.63□□□□□ -0.87
DDX54-203ENST00000546869 CSDC2Q9Y534 153 aaKnown RBP9.63□□□□□ -0.87
DDX54-203ENST00000546869 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.62□□□□□ -0.87
DDX54-203ENST00000546869 TRAV8-4A0A0B4J246 113 aa9.62□□□□□ -0.87
DDX54-203ENST00000546869 IGKV2-29A2NJV5 120 aaPredicted RBP9.62□□□□□ -0.87
DDX54-203ENST00000546869 REG3AQ06141 175 aa9.62□□□□□ -0.87
DDX54-203ENST00000546869 SMAGPQ0VAQ4 97 aa9.62□□□□□ -0.87
DDX54-203ENST00000546869 AMMECR1LQ6DCA0 310 aa9.62□□□□□ -0.87
DDX54-203ENST00000546869 K7EMI3 77 aa9.61□□□□□ -0.87
DDX54-203ENST00000546869 TMEM18Q96B42 140 aa9.61□□□□□ -0.87
DDX54-203ENST00000546869 C1orf43Q9BWL3 253 aa9.61□□□□□ -0.87
DDX54-203ENST00000546869 PGPEP1Q9NXJ5 209 aa9.61□□□□□ -0.87
DDX54-203ENST00000546869 HECTD4Q9Y4D8 3996 aa9.61□□□□□ -0.87
DDX54-203ENST00000546869 IGKV2D-24A0A075B6R9 120 aa9.6□□□□□ -0.87
DDX54-203ENST00000546869 MAPKAPK5-AS1Q8N8E1 139 aa9.6□□□□□ -0.87
DDX54-203ENST00000546869 TMEM101Q96IK0 257 aa9.6□□□□□ -0.87
DDX54-203ENST00000546869 TIMM21Q9BVV7 248 aa9.6□□□□□ -0.87
DDX54-203ENST00000546869 MAP1LC3AQ9H492 121 aa9.6□□□□□ -0.87
DDX54-203ENST00000546869 PKD1P98161 4303 aa9.6□□□□□ -0.87
DDX54-203ENST00000546869 RAB5AP20339 215 aa9.59□□□□□ -0.87
DDX54-203ENST00000546869 CDPF1Q6NVV7 123 aa9.59□□□□□ -0.87
DDX54-203ENST00000546869 RNASEKQ6P5S7 137 aaKnown RBP9.59□□□□□ -0.87
DDX54-203ENST00000546869 Q8N8P6 123 aa9.59□□□□□ -0.87
DDX54-203ENST00000546869 YPEL4Q96NS1 127 aa9.59□□□□□ -0.87
DDX54-203ENST00000546869 CDC42SE2Q9NRR3 84 aa9.59□□□□□ -0.87
DDX54-203ENST00000546869 TGIF2-C20orf24A0A0A6YYL0 155 aa9.58□□□□□ -0.88
DDX54-203ENST00000546869 KRTAP26-1Q6PEX3 210 aa9.58□□□□□ -0.88
DDX54-203ENST00000546869 SPATA12Q7Z6I5 190 aa9.58□□□□□ -0.88
DDX54-203ENST00000546869 OR5A1Q8NGJ0 315 aa9.58□□□□□ -0.88
DDX54-203ENST00000546869 NXT2Q9NPJ8 142 aaKnown RBP9.58□□□□□ -0.88
DDX54-203ENST00000546869 UBE2D4Q9Y2X8 147 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms