RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 SUN5Q8TC36 379 aa6.5□□□□□ -1.37
TMEM116-203ENST00000546537 DIRC1Q969H9 104 aa6.5□□□□□ -1.37
TMEM116-203ENST00000546537 HMGB3O15347 200 aaKnown RBP6.49□□□□□ -1.37
TMEM116-203ENST00000546537 MT-ND6P03923 174 aa6.49□□□□□ -1.37
TMEM116-203ENST00000546537 CRIP1P50238 77 aa6.49□□□□□ -1.37
TMEM116-203ENST00000546537 C1orf137Q5JT78 98 aa6.49□□□□□ -1.37
TMEM116-203ENST00000546537 ARL2-SNX15V9GYD0 113 aa6.49□□□□□ -1.37
TMEM116-203ENST00000546537 ARL14EPLP0DKL9 152 aa6.48□□□□□ -1.37
TMEM116-203ENST00000546537 SUMO1P63165 101 aaKnown RBP6.48□□□□□ -1.37
TMEM116-203ENST00000546537 SCGB1C1Q8TD33 95 aa6.48□□□□□ -1.37
TMEM116-203ENST00000546537 TRAV34A0A0B4J273 112 aa6.47□□□□□ -1.37
TMEM116-203ENST00000546537 H0Y9J4 135 aa6.47□□□□□ -1.37
TMEM116-203ENST00000546537 KRTAP1-4P0C5Y4 121 aa6.47□□□□□ -1.37
TMEM116-203ENST00000546537 AKR1C8PQ5T2L2 129 aa6.47□□□□□ -1.37
TMEM116-203ENST00000546537 PSMG3Q9BT73 122 aaPredicted RBP6.47□□□□□ -1.37
TMEM116-203ENST00000546537 SMIM3Q9BZL3 60 aa6.47□□□□□ -1.37
TMEM116-203ENST00000546537 SMDT1Q9H4I9 107 aa6.47□□□□□ -1.37
TMEM116-203ENST00000546537 TMSB15BA0A087X1C1 80 aa6.46□□□□□ -1.38
TMEM116-203ENST00000546537 TRAV1-1A0A0B4J248 108 aa6.46□□□□□ -1.38
TMEM116-203ENST00000546537 A0A1W2PNN7 141 aa6.46□□□□□ -1.38
TMEM116-203ENST00000546537 SH2D1AO60880 128 aa6.46□□□□□ -1.38
TMEM116-203ENST00000546537 MBP02144 154 aa6.46□□□□□ -1.38
TMEM116-203ENST00000546537 IGLV7-43P04211 117 aa6.46□□□□□ -1.38
TMEM116-203ENST00000546537 STAG3L2P0CL84 134 aa6.46□□□□□ -1.38
TMEM116-203ENST00000546537 STAG3L3P0CL85 134 aa6.46□□□□□ -1.38
TMEM116-203ENST00000546537 PTTG1IPP53801 180 aa6.46□□□□□ -1.38
TMEM116-203ENST00000546537 SERF2P84101 59 aa6.46□□□□□ -1.38
TMEM116-203ENST00000546537 F5H697 171 aa6.45□□□□□ -1.38
TMEM116-203ENST00000546537 AMTP48728 403 aa6.45□□□□□ -1.38
TMEM116-203ENST00000546537 SMCPP49901 116 aaPredicted RBP6.45□□□□□ -1.38
TMEM116-203ENST00000546537 UBE2D1P51668 147 aa6.45□□□□□ -1.38
TMEM116-203ENST00000546537 PEA15Q15121 130 aa6.45□□□□□ -1.38
TMEM116-203ENST00000546537 COX8CQ7Z4L0 72 aa6.45□□□□□ -1.38
TMEM116-203ENST00000546537 CARD19Q96LW7 228 aa6.45□□□□□ -1.38
TMEM116-203ENST00000546537 TMEM243Q9BU79 118 aa6.45□□□□□ -1.38
TMEM116-203ENST00000546537 ATP6V0CP27449 155 aa6.44□□□□□ -1.38
TMEM116-203ENST00000546537 GCHFRP30047 84 aa6.44□□□□□ -1.38
TMEM116-203ENST00000546537 TAGLN2P37802 199 aaKnown RBP6.44□□□□□ -1.38
TMEM116-203ENST00000546537 RPL13AP40429 203 aaKnown RBP6.44□□□□□ -1.38
TMEM116-203ENST00000546537 FAM162BQ5T6X4 162 aa6.44□□□□□ -1.38
TMEM116-203ENST00000546537 Q86TA4 180 aa6.44□□□□□ -1.38
TMEM116-203ENST00000546537 SVBPQ8N300 66 aa6.44□□□□□ -1.38
TMEM116-203ENST00000546537 OR10AG1Q8NH19 301 aa6.44□□□□□ -1.38
TMEM116-203ENST00000546537 IGKV3OR2-268A0A0C4DH90 116 aa6.43□□□□□ -1.38
TMEM116-203ENST00000546537 IFNA1P01562 189 aa6.43□□□□□ -1.38
TMEM116-203ENST00000546537 CDC34P49427 236 aaPredicted RBP6.43□□□□□ -1.38
TMEM116-203ENST00000546537 ZNF674Q2M3X9 581 aa6.43□□□□□ -1.38
TMEM116-203ENST00000546537 FAM213BQ8TBF2 198 aa6.43□□□□□ -1.38
TMEM116-203ENST00000546537 CHCHD10Q8WYQ3 142 aaPredicted RBP6.43□□□□□ -1.38
TMEM116-203ENST00000546537 LINC00526Q96FQ7 95 aa6.43□□□□□ -1.38
TMEM116-203ENST00000546537 SEC11CQ9BY50 192 aa6.43□□□□□ -1.38
TMEM116-203ENST00000546537 WFDC1Q9HC57 220 aa6.43□□□□□ -1.38
TMEM116-203ENST00000546537 TMEM218A2RU14 115 aa6.42□□□□□ -1.38
TMEM116-203ENST00000546537 UBE2L6O14933 153 aa6.42□□□□□ -1.38
TMEM116-203ENST00000546537 SNAPINO95295 136 aa6.42□□□□□ -1.38
TMEM116-203ENST00000546537 TSPAN13O95857 204 aa6.42□□□□□ -1.38
TMEM116-203ENST00000546537 FOXI1Q12951 378 aa6.42□□□□□ -1.38
TMEM116-203ENST00000546537 GAGE2BQ13066 116 aa6.42□□□□□ -1.38
TMEM116-203ENST00000546537 C9orf116Q5BN46 136 aaPredicted RBP6.42□□□□□ -1.38
TMEM116-203ENST00000546537 PHF5AQ7RTV0 110 aaKnown RBP6.42□□□□□ -1.38
TMEM116-203ENST00000546537 TMEM167BQ9NRX6 74 aa6.42□□□□□ -1.38
TMEM116-203ENST00000546537 ZFP30Q9Y2G7 519 aa6.42□□□□□ -1.38
TMEM116-203ENST00000546537 CARHSP1Q9Y2V2 147 aaKnown RBP6.42□□□□□ -1.38
TMEM116-203ENST00000546537 LOC107984640A0A0U1RRK4 108 aa6.41□□□□□ -1.38
TMEM116-203ENST00000546537 A0A1W2PRE2 83 aa6.41□□□□□ -1.38
TMEM116-203ENST00000546537 F8W036 122 aa6.41□□□□□ -1.38
TMEM116-203ENST00000546537 H2AFB1P0C5Y9 115 aa6.41□□□□□ -1.38
TMEM116-203ENST00000546537 SYCNQ0VAF6 134 aa6.41□□□□□ -1.38
TMEM116-203ENST00000546537 C21orf62-AS1Q17RA5 79 aa6.41□□□□□ -1.38
TMEM116-203ENST00000546537 RAB24Q969Q5 203 aa6.41□□□□□ -1.38
TMEM116-203ENST00000546537 M0QY20 66 aa6.4□□□□□ -1.38
TMEM116-203ENST00000546537 PEX7O00628 323 aa6.4□□□□□ -1.38
TMEM116-203ENST00000546537 SNAI2O43623 268 aa6.4□□□□□ -1.38
TMEM116-203ENST00000546537 APOC3P02656 99 aa6.4□□□□□ -1.38
TMEM116-203ENST00000546537 LINC01547P58512 204 aaPredicted RBP6.4□□□□□ -1.38
TMEM116-203ENST00000546537 PGLYRP4Q96LB8 373 aa6.4□□□□□ -1.38
TMEM116-203ENST00000546537 IGHV1-58A0A0C4DH39 117 aa6.39□□□□□ -1.39
TMEM116-203ENST00000546537 CXorf1O96002 111 aa6.39□□□□□ -1.39
TMEM116-203ENST00000546537 SMIM17P0DL12 118 aa6.39□□□□□ -1.39
TMEM116-203ENST00000546537 C10orf91Q5T1B1 145 aa6.39□□□□□ -1.39
TMEM116-203ENST00000546537 SPANXN1Q5VSR9 72 aa6.39□□□□□ -1.39
TMEM116-203ENST00000546537 SSBP4Q9BWG4 385 aaPredicted RBP6.39□□□□□ -1.39
TMEM116-203ENST00000546537 NKX6-2Q9C056 277 aaPredicted RBP6.39□□□□□ -1.39
TMEM116-203ENST00000546537 EIF5A2Q9GZV4 153 aaKnown RBP6.39□□□□□ -1.39
TMEM116-203ENST00000546537 MUC21A0A140T8X8 626 aa6.38□□□□□ -1.39
TMEM116-203ENST00000546537 CTXND1A0A1B0GTU2 59 aa6.38□□□□□ -1.39
TMEM116-203ENST00000546537 CXCL1P09341 107 aa6.38□□□□□ -1.39
TMEM116-203ENST00000546537 OR5AL1P0C617 328 aa6.38□□□□□ -1.39
TMEM116-203ENST00000546537 FGF6P10767 208 aa6.38□□□□□ -1.39
TMEM116-203ENST00000546537 KRTAP11-1Q8IUC1 163 aa6.38□□□□□ -1.39
TMEM116-203ENST00000546537 MBD3L1Q8WWY6 194 aa6.38□□□□□ -1.39
TMEM116-203ENST00000546537 HIST1H2BAQ96A08 127 aa6.38□□□□□ -1.39
TMEM116-203ENST00000546537 ACTR3CQ9C0K3 210 aaPredicted RBP6.38□□□□□ -1.39
TMEM116-203ENST00000546537 CDIP1Q9H305 208 aa6.38□□□□□ -1.39
TMEM116-203ENST00000546537 MANBALQ9NQG1 85 aa6.38□□□□□ -1.39
TMEM116-203ENST00000546537 MAP1LC3B2A6NCE7 125 aa6.37□□□□□ -1.39
TMEM116-203ENST00000546537 ZNF561-AS1K7EIQ3 104 aa6.37□□□□□ -1.39
TMEM116-203ENST00000546537 BCL2P10415 239 aa6.37□□□□□ -1.39
TMEM116-203ENST00000546537 SRSF3P84103 164 aaKnown RBP6.37□□□□□ -1.39
TMEM116-203ENST00000546537 RHEBQ15382 184 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms