RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 LGALS9BQ3B8N2 356 aa8.56□□□□□ -1.04
CCDC38-202ENST00000546386 LGALS9CQ6DKI2 356 aa8.56□□□□□ -1.04
CCDC38-202ENST00000546386 SLC25A34Q6PIV7 304 aa8.56□□□□□ -1.04
CCDC38-202ENST00000546386 FAM110AQ9BQ89 295 aa8.55□□□□□ -1.04
CCDC38-202ENST00000546386 CYSLTR1Q9Y271 337 aa8.55□□□□□ -1.04
CCDC38-202ENST00000546386 CHTOPQ9Y3Y2 248 aaKnown RBP8.55□□□□□ -1.04
CCDC38-202ENST00000546386 IGKV3OR2-268A0A0C4DH90 116 aa8.55□□□□□ -1.04
CCDC38-202ENST00000546386 TRBV27A0A0K0K1C4 114 aa8.55□□□□□ -1.04
CCDC38-202ENST00000546386 UFSP1Q6NVU6 142 aa8.55□□□□□ -1.04
CCDC38-202ENST00000546386 MAPKAPK5-AS1Q8N8E1 139 aa8.55□□□□□ -1.04
CCDC38-202ENST00000546386 RETNQ9HD89 108 aa8.55□□□□□ -1.04
CCDC38-202ENST00000546386 ZNF25P17030 456 aaPredicted RBP8.54□□□□□ -1.04
CCDC38-202ENST00000546386 TMEM263Q8WUH6 116 aaKnown RBP8.54□□□□□ -1.04
CCDC38-202ENST00000546386 STAB2Q8WWQ8 2551 aa8.54□□□□□ -1.04
CCDC38-202ENST00000546386 LINC01546A6NGU7 62 aa8.54□□□□□ -1.04
CCDC38-202ENST00000546386 A8MWV9 139 aa8.54□□□□□ -1.04
CCDC38-202ENST00000546386 DPM2O94777 84 aa8.54□□□□□ -1.04
CCDC38-202ENST00000546386 PRSS47A8MTI9 375 aa8.53□□□□□ -1.04
CCDC38-202ENST00000546386 A8MZ25 164 aa8.53□□□□□ -1.04
CCDC38-202ENST00000546386 I3L3M4 83 aa8.53□□□□□ -1.04
CCDC38-202ENST00000546386 ATP5LO75964 103 aa8.53□□□□□ -1.04
CCDC38-202ENST00000546386 LINC00694P0DN24 101 aa8.53□□□□□ -1.04
CCDC38-202ENST00000546386 HTN3P15516 51 aa8.53□□□□□ -1.04
CCDC38-202ENST00000546386 TMEM170BQ5T4T1 132 aa8.53□□□□□ -1.04
CCDC38-202ENST00000546386 LINC00467Q9BRT7 94 aa8.53□□□□□ -1.04
CCDC38-202ENST00000546386 A0A087WX48 190 aa8.53□□□□□ -1.04
CCDC38-202ENST00000546386 A0A0J9YY99 117 aa8.53□□□□□ -1.04
CCDC38-202ENST00000546386 IGIPA6NJ69 53 aa8.53□□□□□ -1.04
CCDC38-202ENST00000546386 C11orf86A6NJI1 115 aa8.53□□□□□ -1.04
CCDC38-202ENST00000546386 LYSTQ99698 3801 aa8.53□□□□□ -1.04
CCDC38-202ENST00000546386 KRTAP10-11P60412 298 aa8.52□□□□□ -1.05
CCDC38-202ENST00000546386 C9orf66Q5T8R8 295 aa8.52□□□□□ -1.05
CCDC38-202ENST00000546386 C2orf91Q6ZV80 131 aa8.52□□□□□ -1.05
CCDC38-202ENST00000546386 TRGV4A0A0C4DH28 118 aa8.52□□□□□ -1.05
CCDC38-202ENST00000546386 A0A0J9YXV3 536 aa8.51□□□□□ -1.05
CCDC38-202ENST00000546386 G3V4G9 280 aa8.51□□□□□ -1.05
CCDC38-202ENST00000546386 IGHV4-30-4P0DP06 118 aa8.51□□□□□ -1.05
CCDC38-202ENST00000546386 COX8AP10176 69 aa8.51□□□□□ -1.05
CCDC38-202ENST00000546386 FGF6P10767 208 aa8.51□□□□□ -1.05
CCDC38-202ENST00000546386 OR11H2Q8NH07 326 aa8.51□□□□□ -1.05
CCDC38-202ENST00000546386 C20orf203Q8NBC4 194 aa8.5□□□□□ -1.05
CCDC38-202ENST00000546386 CST9LQ9H4G1 147 aa8.5□□□□□ -1.05
CCDC38-202ENST00000546386 H7C1H1 209 aa8.5□□□□□ -1.05
CCDC38-202ENST00000546386 RS1O15537 224 aa8.5□□□□□ -1.05
CCDC38-202ENST00000546386 PPP1R17O96001 155 aa8.5□□□□□ -1.05
CCDC38-202ENST00000546386 SPXQ9BT56 116 aa8.5□□□□□ -1.05
CCDC38-202ENST00000546386 F8VRH5 84 aa8.49□□□□□ -1.05
CCDC38-202ENST00000546386 SMCPP49901 116 aaPredicted RBP8.49□□□□□ -1.05
CCDC38-202ENST00000546386 FAM222AQ5U5X8 452 aa8.49□□□□□ -1.05
CCDC38-202ENST00000546386 NTM-AS1Q6ZSK4 140 aa8.49□□□□□ -1.05
CCDC38-202ENST00000546386 FAM104AQ969W3 186 aa8.49□□□□□ -1.05
CCDC38-202ENST00000546386 RAB37Q96AX2 223 aa8.49□□□□□ -1.05
CCDC38-202ENST00000546386 CELA1Q9UNI1 258 aa8.49□□□□□ -1.05
CCDC38-202ENST00000546386 X6R8D5 127 aa8.49□□□□□ -1.05
CCDC38-202ENST00000546386 IGLV4-69A0A075B6H9 119 aa8.49□□□□□ -1.05
CCDC38-202ENST00000546386 TRBV6-5A0A0K0K1A5 114 aa8.48□□□□□ -1.05
CCDC38-202ENST00000546386 Q6ZUT4 128 aa8.48□□□□□ -1.05
CCDC38-202ENST00000546386 CHCHD7Q9BUK0 85 aa8.48□□□□□ -1.05
CCDC38-202ENST00000546386 ZMAT4Q9H898 229 aa8.48□□□□□ -1.05
CCDC38-202ENST00000546386 C16orf74Q96GX8 76 aa8.48□□□□□ -1.05
CCDC38-202ENST00000546386 C1QTNF4Q9BXJ3 329 aa8.48□□□□□ -1.05
CCDC38-202ENST00000546386 VCX2Q9H322 139 aa8.48□□□□□ -1.05
CCDC38-202ENST00000546386 IGLV4-3A0A075B6K6 122 aa8.47□□□□□ -1.05
CCDC38-202ENST00000546386 TRBV7-3A0A075B6L6 115 aa8.47□□□□□ -1.05
CCDC38-202ENST00000546386 TRAV8-3A0A0A6YYJ7 113 aa8.47□□□□□ -1.05
CCDC38-202ENST00000546386 K7EQD1 137 aa8.47□□□□□ -1.05
CCDC38-202ENST00000546386 COTL1Q14019 142 aa8.47□□□□□ -1.05
CCDC38-202ENST00000546386 Q8N3U1 123 aa8.47□□□□□ -1.05
CCDC38-202ENST00000546386 IL17DQ8TAD2 202 aa8.47□□□□□ -1.05
CCDC38-202ENST00000546386 MRAPQ8TCY5 172 aa8.47□□□□□ -1.05
CCDC38-202ENST00000546386 TRAV13-1A0A0B4J241 112 aa8.47□□□□□ -1.05
CCDC38-202ENST00000546386 PMVKQ15126 192 aa8.47□□□□□ -1.05
CCDC38-202ENST00000546386 PRADC1Q9BSG0 188 aa8.47□□□□□ -1.05
CCDC38-202ENST00000546386 IGHV4-28A0A0C4DH34 117 aa8.46□□□□□ -1.05
CCDC38-202ENST00000546386 K7ERJ3 54 aa8.46□□□□□ -1.05
CCDC38-202ENST00000546386 GCSHP23434 173 aa8.46□□□□□ -1.05
CCDC38-202ENST00000546386 TSPEAR-AS2P59090 65 aa8.46□□□□□ -1.05
CCDC38-202ENST00000546386 CLPSL2Q6UWE3 100 aa8.46□□□□□ -1.05
CCDC38-202ENST00000546386 CHAC1Q9BUX1 264 aa8.46□□□□□ -1.05
CCDC38-202ENST00000546386 TRBV25-1A0A075B6N4 114 aa8.46□□□□□ -1.06
CCDC38-202ENST00000546386 BVES-AS1Q5T3Y7 98 aa8.46□□□□□ -1.06
CCDC38-202ENST00000546386 BOD1L2Q8IYS8 172 aa8.46□□□□□ -1.06
CCDC38-202ENST00000546386 PLEKHB2Q96CS7 222 aa8.46□□□□□ -1.06
CCDC38-202ENST00000546386 C2orf88Q9BSF0 95 aa8.46□□□□□ -1.06
CCDC38-202ENST00000546386 GHRHP01286 108 aa8.45□□□□□ -1.06
CCDC38-202ENST00000546386 DGAT2L7PQ6IED9 249 aa8.45□□□□□ -1.06
CCDC38-202ENST00000546386 C12orf54Q6X4T0 127 aa8.45□□□□□ -1.06
CCDC38-202ENST00000546386 DNHD1Q96M86 4753 aa8.45□□□□□ -1.06
CCDC38-202ENST00000546386 GAGE6Q13070 117 aa8.45□□□□□ -1.06
CCDC38-202ENST00000546386 FHL2Q14192 279 aa8.45□□□□□ -1.06
CCDC38-202ENST00000546386 SFTA2Q6UW10 78 aa8.45□□□□□ -1.06
CCDC38-202ENST00000546386 TRAV4A0A0B4J268 109 aa8.44□□□□□ -1.06
CCDC38-202ENST00000546386 PLNP26678 52 aa8.44□□□□□ -1.06
CCDC38-202ENST00000546386 RPL36AP83881 106 aaKnown RBP8.44□□□□□ -1.06
CCDC38-202ENST00000546386 DAZ2Q13117 558 aaKnown RBP8.44□□□□□ -1.06
CCDC38-202ENST00000546386 RPL36ALQ969Q0 106 aaKnown RBP8.44□□□□□ -1.06
CCDC38-202ENST00000546386 CLUHP3Q96NS8 147 aa8.44□□□□□ -1.06
CCDC38-202ENST00000546386 MRPS16Q9Y3D3 137 aaKnown RBP8.44□□□□□ -1.06
CCDC38-202ENST00000546386 A0A0U1RRA0 63 aa8.44□□□□□ -1.06
CCDC38-202ENST00000546386 RHODO00212 210 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms