RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 CEP192Q8TEP8 1941 aa9.17□□□□□ -0.94
NPC1L1-204ENST00000546276 TRBV30A0A0K0K1B3 111 aa9.17□□□□□ -0.94
NPC1L1-204ENST00000546276 K7EQG2 157 aa9.17□□□□□ -0.94
NPC1L1-204ENST00000546276 TRIAP1O43715 76 aa9.17□□□□□ -0.94
NPC1L1-204ENST00000546276 IGHV3-30P01768 117 aa9.17□□□□□ -0.94
NPC1L1-204ENST00000546276 IGHV3-30-5P0DP03 117 aa9.17□□□□□ -0.94
NPC1L1-204ENST00000546276 IGHV4-4A0A075B6R2 117 aa9.17□□□□□ -0.94
NPC1L1-204ENST00000546276 TRBV27A0A0K0K1C4 114 aa9.17□□□□□ -0.94
NPC1L1-204ENST00000546276 Q9HAA7 133 aa9.17□□□□□ -0.94
NPC1L1-204ENST00000546276 Q8N6K4 173 aa9.17□□□□□ -0.94
NPC1L1-204ENST00000546276 CDKN2A-AS1Q9UH64 79 aa9.16□□□□□ -0.94
NPC1L1-204ENST00000546276 IGLV10-54A0A075B6I4 117 aa9.16□□□□□ -0.94
NPC1L1-204ENST00000546276 TRBV6-5A0A0K0K1A5 114 aa9.16□□□□□ -0.94
NPC1L1-204ENST00000546276 HHLA3Q9XRX5 114 aa9.16□□□□□ -0.94
NPC1L1-204ENST00000546276 HIST2H2BDQ6DRA6 164 aa9.16□□□□□ -0.94
NPC1L1-204ENST00000546276 UBE2DNLQ8IWF7 75 aa9.15□□□□□ -0.94
NPC1L1-204ENST00000546276 LINC00467Q9BRT7 94 aa9.15□□□□□ -0.94
NPC1L1-204ENST00000546276 TNFRSF13BO14836 293 aaPredicted RBP9.15□□□□□ -0.94
NPC1L1-204ENST00000546276 PSCAO43653 123 aa9.15□□□□□ -0.94
NPC1L1-204ENST00000546276 PSMB8P28062 276 aa9.15□□□□□ -0.94
NPC1L1-204ENST00000546276 PRR9Q5T870 116 aa9.15□□□□□ -0.94
NPC1L1-204ENST00000546276 MAP6D1Q9H9H5 199 aa9.15□□□□□ -0.94
NPC1L1-204ENST00000546276 MRPS12O15235 138 aaKnown RBP9.15□□□□□ -0.94
NPC1L1-204ENST00000546276 TMEM263Q8WUH6 116 aaKnown RBP9.15□□□□□ -0.95
NPC1L1-204ENST00000546276 C4orf3Q8WVX3 66 aa9.15□□□□□ -0.95
NPC1L1-204ENST00000546276 ZMAT4Q9H898 229 aa9.15□□□□□ -0.95
NPC1L1-204ENST00000546276 RNASE3P12724 160 aaKnown RBP9.14□□□□□ -0.95
NPC1L1-204ENST00000546276 WNK1Q9H4A3 2382 aa9.14□□□□□ -0.95
NPC1L1-204ENST00000546276 CDK2AP2O75956 126 aa9.14□□□□□ -0.95
NPC1L1-204ENST00000546276 C14orf132Q9NPU4 83 aa9.14□□□□□ -0.95
NPC1L1-204ENST00000546276 TMEM258P61165 79 aa9.14□□□□□ -0.95
NPC1L1-204ENST00000546276 CXCL5P42830 114 aa9.14□□□□□ -0.95
NPC1L1-204ENST00000546276 COL5A1P20908 1838 aaPredicted RBP9.13□□□□□ -0.95
NPC1L1-204ENST00000546276 H3BQ85 93 aa9.13□□□□□ -0.95
NPC1L1-204ENST00000546276 INSL3P51460 131 aa9.13□□□□□ -0.95
NPC1L1-204ENST00000546276 DEFB113Q30KQ7 82 aa9.13□□□□□ -0.95
NPC1L1-204ENST00000546276 LINC00308Q8TCZ7 52 aa9.13□□□□□ -0.95
NPC1L1-204ENST00000546276 POLR2KP53803 58 aaKnown RBP9.12□□□□□ -0.95
NPC1L1-204ENST00000546276 NRGNQ92686 78 aa9.12□□□□□ -0.95
NPC1L1-204ENST00000546276 PYGO1Q9Y3Y4 419 aa9.12□□□□□ -0.95
NPC1L1-204ENST00000546276 hADV29S1A0JD25 119 aa9.12□□□□□ -0.95
NPC1L1-204ENST00000546276 TMEM256-PLSCR3K7ERE1 68 aa9.12□□□□□ -0.95
NPC1L1-204ENST00000546276 NDUFA1O15239 70 aa9.12□□□□□ -0.95
NPC1L1-204ENST00000546276 C11orf71Q6IPW1 123 aa9.11□□□□□ -0.95
NPC1L1-204ENST00000546276 NOTCH2Q04721 2471 aa9.11□□□□□ -0.95
NPC1L1-204ENST00000546276 NCR3O14931 201 aa9.11□□□□□ -0.95
NPC1L1-204ENST00000546276 TSHBP01222 138 aa9.11□□□□□ -0.95
NPC1L1-204ENST00000546276 XGP55808 180 aa9.11□□□□□ -0.95
NPC1L1-204ENST00000546276 Q6ZS46 218 aa9.11□□□□□ -0.95
NPC1L1-204ENST00000546276 MRAPQ8TCY5 172 aa9.11□□□□□ -0.95
NPC1L1-204ENST00000546276 CAMK2N2Q96S95 79 aa9.11□□□□□ -0.95
NPC1L1-204ENST00000546276 CSPG4Q6UVK1 2322 aa9.11□□□□□ -0.95
NPC1L1-204ENST00000546276 UQCRQO14949 82 aa9.11□□□□□ -0.95
NPC1L1-204ENST00000546276 TIRAPP58753 221 aa9.11□□□□□ -0.95
NPC1L1-204ENST00000546276 A0A096LNJ9 63 aa9.1□□□□□ -0.95
NPC1L1-204ENST00000546276 CLPSL1A2RUU4 121 aa9.1□□□□□ -0.95
NPC1L1-204ENST00000546276 NCOR2Q9Y618 2525 aa9.1□□□□□ -0.95
NPC1L1-204ENST00000546276 KLLNB2CW77 178 aa9.1□□□□□ -0.95
NPC1L1-204ENST00000546276 Q6ZTI0 123 aa9.1□□□□□ -0.95
NPC1L1-204ENST00000546276 DEFB105AQ8NG35 78 aa9.1□□□□□ -0.95
NPC1L1-204ENST00000546276 IGKV2D-24A0A075B6R9 120 aa9.09□□□□□ -0.95
NPC1L1-204ENST00000546276 FUSP35637 526 aaKnown RBP eCLIP9.09□□□□□ -0.95
NPC1L1-204ENST00000546276 DEFB121Q5J5C9 76 aa9.09□□□□□ -0.95
NPC1L1-204ENST00000546276 TIMM17BO60830 172 aa9.09□□□□□ -0.95
NPC1L1-204ENST00000546276 RMI2Q96E14 147 aa9.09□□□□□ -0.95
NPC1L1-204ENST00000546276 SPAG11BQ08648 103 aa9.08□□□□□ -0.96
NPC1L1-204ENST00000546276 COX8CQ7Z4L0 72 aa9.08□□□□□ -0.96
NPC1L1-204ENST00000546276 C1orf43Q9BWL3 253 aa9.08□□□□□ -0.96
NPC1L1-204ENST00000546276 SPART-AS1P0CW21 52 aa9.07□□□□□ -0.96
NPC1L1-204ENST00000546276 PROK1P58294 105 aa9.07□□□□□ -0.96
NPC1L1-204ENST00000546276 ESM1Q9NQ30 184 aa9.07□□□□□ -0.96
NPC1L1-204ENST00000546276 IGIPA6NJ69 53 aa9.07□□□□□ -0.96
NPC1L1-204ENST00000546276 A8MZ25 164 aa9.07□□□□□ -0.96
NPC1L1-204ENST00000546276 LST1O00453 97 aa9.07□□□□□ -0.96
NPC1L1-204ENST00000546276 C9orf85Q96MD7 179 aa9.07□□□□□ -0.96
NPC1L1-204ENST00000546276 C2CD3Q4AC94 2353 aa9.06□□□□□ -0.96
NPC1L1-204ENST00000546276 CRYGDP07320 174 aa9.06□□□□□ -0.96
NPC1L1-204ENST00000546276 NREPQ16612 68 aa9.06□□□□□ -0.96
NPC1L1-204ENST00000546276 SDIM1Q6ZPB5 146 aa9.06□□□□□ -0.96
NPC1L1-204ENST00000546276 PSMG3-AS1Q96PY0 264 aa9.06□□□□□ -0.96
NPC1L1-204ENST00000546276 PDE6GP18545 87 aa9.06□□□□□ -0.96
NPC1L1-204ENST00000546276 PIK3CD-AS1Q5SR53 167 aa9.06□□□□□ -0.96
NPC1L1-204ENST00000546276 C9orf66Q5T8R8 295 aa9.06□□□□□ -0.96
NPC1L1-204ENST00000546276 DIRC1Q969H9 104 aa9.06□□□□□ -0.96
NPC1L1-204ENST00000546276 C3orf22Q8N5N4 141 aa9.06□□□□□ -0.96
NPC1L1-204ENST00000546276 PRO0255Q9UI72 69 aa9.06□□□□□ -0.96
NPC1L1-204ENST00000546276 H7C423 109 aa9.05□□□□□ -0.96
NPC1L1-204ENST00000546276 C19orf84I3L1E1 186 aa9.05□□□□□ -0.96
NPC1L1-204ENST00000546276 UBE2D1P51668 147 aa9.05□□□□□ -0.96
NPC1L1-204ENST00000546276 EXPH5Q8NEV8 1989 aa9.05□□□□□ -0.96
NPC1L1-204ENST00000546276 ETDCA0A1B0GVM5 59 aa9.05□□□□□ -0.96
NPC1L1-204ENST00000546276 DEFB114Q30KQ6 69 aa9.05□□□□□ -0.96
NPC1L1-204ENST00000546276 IBA57-AS1B1ANH7 110 aa9.05□□□□□ -0.96
NPC1L1-204ENST00000546276 CITED2Q99967 270 aaPredicted RBP9.04□□□□□ -0.96
NPC1L1-204ENST00000546276 IMUPQ9GZP8 106 aa9.04□□□□□ -0.96
NPC1L1-204ENST00000546276 TRAV23DV6A0A075B6W5 121 aa9.04□□□□□ -0.96
NPC1L1-204ENST00000546276 PRB1P04280 392 aa9.03□□□□□ -0.96
NPC1L1-204ENST00000546276 DSCAMO60469 2012 aa9.03□□□□□ -0.96
NPC1L1-204ENST00000546276 UBE2D4Q9Y2X8 147 aa9.03□□□□□ -0.96
NPC1L1-204ENST00000546276 F8W735 103 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms