RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 TRAV26-2A0A0B4J265 109 aa7.88□□□□□ -1.15
YBX3-217ENST00000546164 RAB14P61106 215 aa7.88□□□□□ -1.15
YBX3-217ENST00000546164 Q0VG73 95 aa7.88□□□□□ -1.15
YBX3-217ENST00000546164 NUP35Q8NFH5 326 aa7.88□□□□□ -1.15
YBX3-217ENST00000546164 NTN5Q8WTR8 489 aaPredicted RBP7.88□□□□□ -1.15
YBX3-217ENST00000546164 UBE2WQ96B02 151 aa7.88□□□□□ -1.15
YBX3-217ENST00000546164 FAT1Q14517 4588 aa7.88□□□□□ -1.15
YBX3-217ENST00000546164 KRTAP4-8A0A0G2JLE6 195 aa7.87□□□□□ -1.15
YBX3-217ENST00000546164 SMIM27A0A1W2PRY6 76 aa7.87□□□□□ -1.15
YBX3-217ENST00000546164 RBX1P62877 108 aa7.87□□□□□ -1.15
YBX3-217ENST00000546164 Q8N814 137 aa7.87□□□□□ -1.15
YBX3-217ENST00000546164 MAPKAPK5-AS1Q8N8E1 139 aa7.87□□□□□ -1.15
YBX3-217ENST00000546164 PRR34Q9NV39 138 aa7.87□□□□□ -1.15
YBX3-217ENST00000546164 NAT8BQ9UHF3 227 aa7.87□□□□□ -1.15
YBX3-217ENST00000546164 IGKV2D-24A0A075B6R9 120 aa7.86□□□□□ -1.15
YBX3-217ENST00000546164 TRBV6-5A0A0K0K1A5 114 aa7.86□□□□□ -1.15
YBX3-217ENST00000546164 GAGE6Q13070 117 aa7.86□□□□□ -1.15
YBX3-217ENST00000546164 RIGQ13278 110 aa7.86□□□□□ -1.15
YBX3-217ENST00000546164 COTL1Q14019 142 aa7.86□□□□□ -1.15
YBX3-217ENST00000546164 CLLU1Q5K131 121 aa7.86□□□□□ -1.15
YBX3-217ENST00000546164 ENHOQ6UWT2 76 aa7.86□□□□□ -1.15
YBX3-217ENST00000546164 Q8N976 141 aa7.86□□□□□ -1.15
YBX3-217ENST00000546164 TMEM243Q9BU79 118 aa7.86□□□□□ -1.15
YBX3-217ENST00000546164 A0A1B0GUV1 79 aa7.85□□□□□ -1.15
YBX3-217ENST00000546164 NCR2O95944 276 aa7.85□□□□□ -1.15
YBX3-217ENST00000546164 CRPP02741 224 aa7.85□□□□□ -1.15
YBX3-217ENST00000546164 ANGP03950 147 aaKnown RBP7.85□□□□□ -1.15
YBX3-217ENST00000546164 FUSP35637 526 aaKnown RBP eCLIP7.85□□□□□ -1.15
YBX3-217ENST00000546164 WFDC2Q14508 124 aa7.85□□□□□ -1.15
YBX3-217ENST00000546164 MIAQ16674 131 aa7.85□□□□□ -1.15
YBX3-217ENST00000546164 RPL39LQ96EH5 51 aaKnown RBP7.85□□□□□ -1.15
YBX3-217ENST00000546164 RNF185Q96GF1 192 aa7.85□□□□□ -1.15
YBX3-217ENST00000546164 IGLV5-52A0A0A0MRZ9 124 aa7.84□□□□□ -1.15
YBX3-217ENST00000546164 SDHAF1A6NFY7 115 aa7.84□□□□□ -1.15
YBX3-217ENST00000546164 RAB4AP20338 218 aa7.84□□□□□ -1.15
YBX3-217ENST00000546164 AMTP48728 403 aa7.84□□□□□ -1.15
YBX3-217ENST00000546164 MRAP2Q96G30 205 aa7.84□□□□□ -1.15
YBX3-217ENST00000546164 C1orf43Q9BWL3 253 aa7.84□□□□□ -1.15
YBX3-217ENST00000546164 A0A1B0GW15 77 aa7.83□□□□□ -1.16
YBX3-217ENST00000546164 GCSHP23434 173 aa7.83□□□□□ -1.16
YBX3-217ENST00000546164 KRTAP10-1P60331 282 aa7.83□□□□□ -1.16
YBX3-217ENST00000546164 PNRC1Q12796 327 aaPredicted RBP7.83□□□□□ -1.16
YBX3-217ENST00000546164 AMN1Q8IY45 258 aa7.83□□□□□ -1.16
YBX3-217ENST00000546164 C20orf203Q8NBC4 194 aa7.83□□□□□ -1.16
YBX3-217ENST00000546164 BAALCQ8WXS3 180 aa7.83□□□□□ -1.16
YBX3-217ENST00000546164 GAS8-AS1O95177 125 aa7.82□□□□□ -1.16
YBX3-217ENST00000546164 IFITM2Q01629 132 aa7.82□□□□□ -1.16
YBX3-217ENST00000546164 LINC00269Q8N2A0 174 aa7.82□□□□□ -1.16
YBX3-217ENST00000546164 TMEM70Q9BUB7 260 aa7.82□□□□□ -1.16
YBX3-217ENST00000546164 IGLV4-60A0A075B6I1 120 aa7.81□□□□□ -1.16
YBX3-217ENST00000546164 TRBV27A0A0K0K1C4 114 aa7.81□□□□□ -1.16
YBX3-217ENST00000546164 A6NJY4 79 aa7.81□□□□□ -1.16
YBX3-217ENST00000546164 H7C423 109 aa7.81□□□□□ -1.16
YBX3-217ENST00000546164 I3L3M4 83 aa7.81□□□□□ -1.16
YBX3-217ENST00000546164 UBE2L6O14933 153 aa7.81□□□□□ -1.16
YBX3-217ENST00000546164 LECT2O14960 151 aa7.81□□□□□ -1.16
YBX3-217ENST00000546164 PPP1R2P9O14990 202 aa7.81□□□□□ -1.16
YBX3-217ENST00000546164 PPP1R17O96001 155 aa7.81□□□□□ -1.16
YBX3-217ENST00000546164 APCSP02743 223 aa7.81□□□□□ -1.16
YBX3-217ENST00000546164 RPS10P46783 165 aaKnown RBP7.81□□□□□ -1.16
YBX3-217ENST00000546164 POLR2KP53803 58 aaKnown RBP7.81□□□□□ -1.16
YBX3-217ENST00000546164 REG3AQ06141 175 aa7.81□□□□□ -1.16
YBX3-217ENST00000546164 FAM104BQ5XKR9 115 aa7.81□□□□□ -1.16
YBX3-217ENST00000546164 KRTAP26-1Q6PEX3 210 aa7.81□□□□□ -1.16
YBX3-217ENST00000546164 DEFB104AQ8WTQ1 72 aa7.81□□□□□ -1.16
YBX3-217ENST00000546164 ST20Q9HBF5 79 aa7.81□□□□□ -1.16
YBX3-217ENST00000546164 TRAV8-4A0A0B4J246 113 aa7.8□□□□□ -1.16
YBX3-217ENST00000546164 A0A1B0GXF2 115 aa7.8□□□□□ -1.16
YBX3-217ENST00000546164 S100A8P05109 93 aa7.8□□□□□ -1.16
YBX3-217ENST00000546164 PMCHP20382 165 aa7.8□□□□□ -1.16
YBX3-217ENST00000546164 NRACQ8N912 160 aa7.8□□□□□ -1.16
YBX3-217ENST00000546164 LINC00862A6NCI5 91 aa7.79□□□□□ -1.16
YBX3-217ENST00000546164 TSHBP01222 138 aa7.79□□□□□ -1.16
YBX3-217ENST00000546164 ESDP10768 282 aa7.79□□□□□ -1.16
YBX3-217ENST00000546164 CAMPP49913 170 aa7.79□□□□□ -1.16
YBX3-217ENST00000546164 XGP55808 180 aa7.79□□□□□ -1.16
YBX3-217ENST00000546164 HBBP68871 147 aa7.79□□□□□ -1.16
YBX3-217ENST00000546164 C14orf177Q52M58 125 aa7.79□□□□□ -1.16
YBX3-217ENST00000546164 UQCC3Q6UW78 93 aa7.79□□□□□ -1.16
YBX3-217ENST00000546164 CLPSL2Q6UWE3 100 aa7.79□□□□□ -1.16
YBX3-217ENST00000546164 KRTAP17-1Q9BYP8 105 aa7.79□□□□□ -1.16
YBX3-217ENST00000546164 ZNF25P17030 456 aaPredicted RBP7.78□□□□□ -1.16
YBX3-217ENST00000546164 MRPL51Q4U2R6 128 aaKnown RBP7.78□□□□□ -1.16
YBX3-217ENST00000546164 ATP5L2Q7Z4Y8 100 aa7.78□□□□□ -1.16
YBX3-217ENST00000546164 Q8N1X5 172 aa7.78□□□□□ -1.16
YBX3-217ENST00000546164 ANAPC16Q96DE5 110 aa7.78□□□□□ -1.16
YBX3-217ENST00000546164 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.77□□□□□ -1.17
YBX3-217ENST00000546164 TRBV24-1A0A075B6N3 115 aa7.77□□□□□ -1.17
YBX3-217ENST00000546164 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.77□□□□□ -1.17
YBX3-217ENST00000546164 IGKV2-29A2NJV5 120 aaPredicted RBP7.77□□□□□ -1.17
YBX3-217ENST00000546164 F8W036 122 aa7.77□□□□□ -1.17
YBX3-217ENST00000546164 SMKR1H3BMG3 65 aa7.77□□□□□ -1.17
YBX3-217ENST00000546164 VCYO14598 125 aa7.77□□□□□ -1.17
YBX3-217ENST00000546164 MT-ND4LP03901 98 aa7.77□□□□□ -1.17
YBX3-217ENST00000546164 FGF6P10767 208 aa7.77□□□□□ -1.17
YBX3-217ENST00000546164 SUMO2P61956 95 aaKnown RBP7.77□□□□□ -1.17
YBX3-217ENST00000546164 MRPL54Q6P161 138 aaKnown RBP7.77□□□□□ -1.17
YBX3-217ENST00000546164 TMEM242Q9NWH2 141 aa7.77□□□□□ -1.17
YBX3-217ENST00000546164 VPS13BQ7Z7G8 4022 aa7.76□□□□□ -1.17
YBX3-217ENST00000546164 USP17L23D6RBM5 183 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms