RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 TRAV8-4A0A0B4J246 113 aa14.71□□□□□ -0.05
CHD4-214ENST00000545942 J3QL48 77 aa14.71□□□□□ -0.05
CHD4-214ENST00000545942 BLOC1S1P78537 153 aa14.71□□□□□ -0.05
CHD4-214ENST00000545942 COTL1Q14019 142 aa14.71□□□□□ -0.05
CHD4-214ENST00000545942 TMEM250H0YL14 139 aa14.7□□□□□ -0.06
CHD4-214ENST00000545942 UBE2L6O14933 153 aa14.7□□□□□ -0.06
CHD4-214ENST00000545942 ALKAL2Q6UX46 152 aa14.7□□□□□ -0.06
CHD4-214ENST00000545942 CLRN3Q8NCR9 226 aa14.7□□□□□ -0.06
CHD4-214ENST00000545942 AMTP48728 403 aa14.69□□□□□ -0.06
CHD4-214ENST00000545942 C9orf163Q8N9P6 203 aa14.69□□□□□ -0.06
CHD4-214ENST00000545942 SMIM15Q7Z3B0 74 aa14.68□□□□□ -0.06
CHD4-214ENST00000545942 GATD1Q8NB37 220 aa14.68□□□□□ -0.06
CHD4-214ENST00000545942 GTSF1Q8WW33 167 aa14.68□□□□□ -0.06
CHD4-214ENST00000545942 GFRA4Q9GZZ7 299 aa14.68□□□□□ -0.06
CHD4-214ENST00000545942 TRAV26-2A0A0B4J265 109 aa14.67□□□□□ -0.06
CHD4-214ENST00000545942 KRTAP10-4P60372 401 aaPredicted RBP14.66□□□□□ -0.06
CHD4-214ENST00000545942 LYPD6BQ8NI32 183 aa14.66□□□□□ -0.06
CHD4-214ENST00000545942 hCG_2014768A0A024R1R8 64 aa14.66□□□□□ -0.06
CHD4-214ENST00000545942 KRTAP29-1A8MX34 341 aaPredicted RBP14.66□□□□□ -0.06
CHD4-214ENST00000545942 GATCO43716 136 aaKnown RBP14.66□□□□□ -0.06
CHD4-214ENST00000545942 FAM231DQ6ZW35 169 aa14.66□□□□□ -0.06
CHD4-214ENST00000545942 A8MWL6 223 aa14.65□□□□□ -0.06
CHD4-214ENST00000545942 CEBPGP53567 150 aa14.64□□□□□ -0.07
CHD4-214ENST00000545942 CNBPP62633 177 aaKnown RBP14.64□□□□□ -0.07
CHD4-214ENST00000545942 TEX261Q6UWH6 196 aa14.64□□□□□ -0.07
CHD4-214ENST00000545942 RPL39LQ96EH5 51 aaKnown RBP14.64□□□□□ -0.07
CHD4-214ENST00000545942 hDV102S1A0JD36 115 aa14.63□□□□□ -0.07
CHD4-214ENST00000545942 FOXA3P55318 350 aaPredicted RBP14.63□□□□□ -0.07
CHD4-214ENST00000545942 SDIM1Q6ZPB5 146 aa14.63□□□□□ -0.07
CHD4-214ENST00000545942 NCR2O95944 276 aa14.62□□□□□ -0.07
CHD4-214ENST00000545942 CT83Q5H943 113 aa14.62□□□□□ -0.07
CHD4-214ENST00000545942 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.62□□□□□ -0.07
CHD4-214ENST00000545942 AP5S1Q9NUS5 200 aa14.61□□□□□ -0.07
CHD4-214ENST00000545942 AMMECR1LQ6DCA0 310 aa14.6□□□□□ -0.07
CHD4-214ENST00000545942 EIF5A2Q9GZV4 153 aaKnown RBP14.6□□□□□ -0.07
CHD4-214ENST00000545942 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.59□□□□□ -0.07
CHD4-214ENST00000545942 SDHAF1A6NFY7 115 aa14.59□□□□□ -0.07
CHD4-214ENST00000545942 APCSP02743 223 aa14.59□□□□□ -0.07
CHD4-214ENST00000545942 RPL37AP61513 92 aaKnown RBP14.59□□□□□ -0.07
CHD4-214ENST00000545942 BORCS7Q96B45 105 aa14.59□□□□□ -0.07
CHD4-214ENST00000545942 SMIM7Q9BQ49 75 aa14.59□□□□□ -0.07
CHD4-214ENST00000545942 H7C423 109 aa14.58□□□□□ -0.08
CHD4-214ENST00000545942 PANO1I0J062 215 aa14.58□□□□□ -0.08
CHD4-214ENST00000545942 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.57□□□□□ -0.08
CHD4-214ENST00000545942 IGKV3OR2-268A0A0C4DH90 116 aa14.57□□□□□ -0.08
CHD4-214ENST00000545942 IGKV2-29A2NJV5 120 aaPredicted RBP14.57□□□□□ -0.08
CHD4-214ENST00000545942 NDUFS6O75380 124 aaKnown RBP14.57□□□□□ -0.08
CHD4-214ENST00000545942 LINC01551Q86U37 167 aa14.57□□□□□ -0.08
CHD4-214ENST00000545942 IGHV3-64A0A075B6Q5 118 aa14.56□□□□□ -0.08
CHD4-214ENST00000545942 GAGE12HA6NDE8 117 aa14.56□□□□□ -0.08
CHD4-214ENST00000545942 RNASEKQ6P5S7 137 aaKnown RBP14.56□□□□□ -0.08
CHD4-214ENST00000545942 TSKUQ8WUA8 353 aa14.56□□□□□ -0.08
CHD4-214ENST00000545942 TRBV6-5A0A0K0K1A5 114 aa14.55□□□□□ -0.08
CHD4-214ENST00000545942 I3L3M4 83 aa14.55□□□□□ -0.08
CHD4-214ENST00000545942 SLPIP03973 132 aa14.55□□□□□ -0.08
CHD4-214ENST00000545942 FGF6P10767 208 aa14.55□□□□□ -0.08
CHD4-214ENST00000545942 PMCHP20382 165 aa14.55□□□□□ -0.08
CHD4-214ENST00000545942 CIRBPQ14011 172 aaKnown RBP14.55□□□□□ -0.08
CHD4-214ENST00000545942 CFAP161Q6P656 301 aa14.55□□□□□ -0.08
CHD4-214ENST00000545942 FAM210AQ96ND0 272 aa14.55□□□□□ -0.08
CHD4-214ENST00000545942 A0A1B0GUT8 65 aa14.54□□□□□ -0.08
CHD4-214ENST00000545942 HIGD1CA8MV81 97 aa14.54□□□□□ -0.08
CHD4-214ENST00000545942 FAM231BA6NCW3 169 aa14.53□□□□□ -0.08
CHD4-214ENST00000545942 ZNF727A8MUV8 499 aa14.53□□□□□ -0.08
CHD4-214ENST00000545942 OXTP01178 125 aa14.53□□□□□ -0.08
CHD4-214ENST00000545942 C15orf56Q8N910 161 aa14.53□□□□□ -0.08
CHD4-214ENST00000545942 CHCHD10Q8WYQ3 142 aaPredicted RBP14.53□□□□□ -0.08
CHD4-214ENST00000545942 ZNF25P17030 456 aaPredicted RBP14.52□□□□□ -0.08
CHD4-214ENST00000545942 TMEM191AQ9H0A3 160 aa14.52□□□□□ -0.08
CHD4-214ENST00000545942 ST20Q9HBF5 79 aa14.52□□□□□ -0.08
CHD4-214ENST00000545942 OSTCQ9NRP0 149 aa14.52□□□□□ -0.08
CHD4-214ENST00000545942 GAS8-AS1O95177 125 aa14.5□□□□□ -0.09
CHD4-214ENST00000545942 SRP19P09132 144 aaKnown RBP14.5□□□□□ -0.09
CHD4-214ENST00000545942 DPH3Q96FX2 82 aa14.5□□□□□ -0.09
CHD4-214ENST00000545942 BTF3L4Q96K17 158 aa14.5□□□□□ -0.09
CHD4-214ENST00000545942 LRP1Q07954 4544 aaKnown RBP14.5□□□□□ -0.09
CHD4-214ENST00000545942 OR5A1Q8NGJ0 315 aa14.49□□□□□ -0.09
CHD4-214ENST00000545942 RNF185Q96GF1 192 aa14.49□□□□□ -0.09
CHD4-214ENST00000545942 TMEM101Q96IK0 257 aa14.49□□□□□ -0.09
CHD4-214ENST00000545942 TSHBP01222 138 aa14.48□□□□□ -0.09
CHD4-214ENST00000545942 ESDP10768 282 aa14.48□□□□□ -0.09
CHD4-214ENST00000545942 RAB4AP20338 218 aa14.48□□□□□ -0.09
CHD4-214ENST00000545942 HIGD2BQ4VC39 106 aa14.48□□□□□ -0.09
CHD4-214ENST00000545942 MRAP2Q96G30 205 aa14.48□□□□□ -0.09
CHD4-214ENST00000545942 TMEM242Q9NWH2 141 aa14.48□□□□□ -0.09
CHD4-214ENST00000545942 RPS10P46783 165 aaKnown RBP14.47□□□□□ -0.09
CHD4-214ENST00000545942 AMN1Q8IY45 258 aa14.47□□□□□ -0.09
CHD4-214ENST00000545942 SPACA4Q8TDM5 124 aa14.47□□□□□ -0.09
CHD4-214ENST00000545942 A0A087WYN8 130 aa14.46□□□□□ -0.09
CHD4-214ENST00000545942 CHTF8P0CG12 524 aa14.46□□□□□ -0.09
CHD4-214ENST00000545942 HNRNPA3P51991 378 aaKnown RBP14.46□□□□□ -0.09
CHD4-214ENST00000545942 POLR2KP53803 58 aaKnown RBP14.46□□□□□ -0.09
CHD4-214ENST00000545942 V9GYV3 84 aa14.46□□□□□ -0.09
CHD4-214ENST00000545942 GVQW2A0A096LPI5 108 aaPredicted RBP14.45□□□□□ -0.1
CHD4-214ENST00000545942 TRBV27A0A0K0K1C4 114 aa14.45□□□□□ -0.1
CHD4-214ENST00000545942 FOXI1Q12951 378 aa14.45□□□□□ -0.1
CHD4-214ENST00000545942 XCL1P47992 114 aa14.44□□□□□ -0.1
CHD4-214ENST00000545942 RIGQ13278 110 aa14.44□□□□□ -0.1
CHD4-214ENST00000545942 TMEM241Q24JQ0 296 aa14.44□□□□□ -0.1
CHD4-214ENST00000545942 ISOC2Q96AB3 205 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms