RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 IGKV2-24A0A0C4DH68 120 aa10.38□□□□□ -0.75
CPSF7-225ENST00000545934 ARPC5O15511 151 aa10.38□□□□□ -0.75
CPSF7-225ENST00000545934 RPL35P42766 123 aaKnown RBP10.38□□□□□ -0.75
CPSF7-225ENST00000545934 SULT1A2P50226 295 aa10.38□□□□□ -0.75
CPSF7-225ENST00000545934 A0A096LNI7 61 aa10.37□□□□□ -0.75
CPSF7-225ENST00000545934 C19orf71A6NCJ1 209 aa10.37□□□□□ -0.75
CPSF7-225ENST00000545934 RPS20P60866 119 aaKnown RBP10.37□□□□□ -0.75
CPSF7-225ENST00000545934 SRSF9Q13242 221 aaKnown RBP eCLIP10.37□□□□□ -0.75
CPSF7-225ENST00000545934 HIGD2BQ4VC39 106 aa10.37□□□□□ -0.75
CPSF7-225ENST00000545934 FAM213BQ8TBF2 198 aa10.37□□□□□ -0.75
CPSF7-225ENST00000545934 C11orf52Q96A22 123 aa10.37□□□□□ -0.75
CPSF7-225ENST00000545934 A0A1B0GV50 99 aa10.36□□□□□ -0.75
CPSF7-225ENST00000545934 UMAD1C9J7I0 102 aa10.36□□□□□ -0.75
CPSF7-225ENST00000545934 UBE2L6O14933 153 aa10.36□□□□□ -0.75
CPSF7-225ENST00000545934 AMTP48728 403 aa10.36□□□□□ -0.75
CPSF7-225ENST00000545934 COTL1Q14019 142 aa10.36□□□□□ -0.75
CPSF7-225ENST00000545934 KCNRGQ8N5I3 272 aa10.36□□□□□ -0.75
CPSF7-225ENST00000545934 TPPP3Q9BW30 176 aa10.36□□□□□ -0.75
CPSF7-225ENST00000545934 REG3GQ6UW15 175 aa10.35□□□□□ -0.75
CPSF7-225ENST00000545934 OR2D3Q8NGH3 330 aa10.35□□□□□ -0.75
CPSF7-225ENST00000545934 LYPD6BQ8NI32 183 aa10.35□□□□□ -0.75
CPSF7-225ENST00000545934 CHCHD10Q8WYQ3 142 aaPredicted RBP10.35□□□□□ -0.75
CPSF7-225ENST00000545934 F2Z2F3 143 aa10.34□□□□□ -0.75
CPSF7-225ENST00000545934 TRGC1P0CF51 173 aa10.34□□□□□ -0.75
CPSF7-225ENST00000545934 CENPWQ5EE01 88 aa10.34□□□□□ -0.75
CPSF7-225ENST00000545934 FOXI1Q12951 378 aa10.33□□□□□ -0.76
CPSF7-225ENST00000545934 LYZL1Q6UWQ5 148 aa10.33□□□□□ -0.76
CPSF7-225ENST00000545934 IGKV3OR2-268A0A0C4DH90 116 aa10.32□□□□□ -0.76
CPSF7-225ENST00000545934 GAS8-AS1O95177 125 aa10.32□□□□□ -0.76
CPSF7-225ENST00000545934 NTF3P20783 257 aa10.32□□□□□ -0.76
CPSF7-225ENST00000545934 ZNF345Q14585 488 aa10.32□□□□□ -0.76
CPSF7-225ENST00000545934 SMIM12Q96EX1 92 aa10.32□□□□□ -0.76
CPSF7-225ENST00000545934 LINC00474Q9P2X8 69 aa10.32□□□□□ -0.76
CPSF7-225ENST00000545934 H7C423 109 aa10.31□□□□□ -0.76
CPSF7-225ENST00000545934 H2AFB1P0C5Y9 115 aa10.31□□□□□ -0.76
CPSF7-225ENST00000545934 Q6ZNX1 250 aa10.31□□□□□ -0.76
CPSF7-225ENST00000545934 C9orf62Q8N4C0 152 aa10.31□□□□□ -0.76
CPSF7-225ENST00000545934 GATD1Q8NB37 220 aa10.31□□□□□ -0.76
CPSF7-225ENST00000545934 CNFNQ9BYD5 112 aa10.31□□□□□ -0.76
CPSF7-225ENST00000545934 CTRLP40313 264 aa10.3□□□□□ -0.76
CPSF7-225ENST00000545934 CCL20P78556 96 aa10.3□□□□□ -0.76
CPSF7-225ENST00000545934 Q6ZRP5 223 aa10.3□□□□□ -0.76
CPSF7-225ENST00000545934 RAB19A4D1S5 217 aa10.29□□□□□ -0.76
CPSF7-225ENST00000545934 NCR2O95944 276 aa10.29□□□□□ -0.76
CPSF7-225ENST00000545934 MANBALQ9NQG1 85 aa10.29□□□□□ -0.76
CPSF7-225ENST00000545934 PKIGQ9Y2B9 76 aa10.29□□□□□ -0.76
CPSF7-225ENST00000545934 XKRY2A2RUG3 117 aa10.28□□□□□ -0.76
CPSF7-225ENST00000545934 SMLR1H3BR10 107 aa10.28□□□□□ -0.76
CPSF7-225ENST00000545934 IFNA1P01562 189 aa10.28□□□□□ -0.76
CPSF7-225ENST00000545934 FGF6P10767 208 aa10.28□□□□□ -0.76
CPSF7-225ENST00000545934 AMMECR1LQ6DCA0 310 aa10.28□□□□□ -0.76
CPSF7-225ENST00000545934 TRBV20OR9-2A0A075B6H5 130 aa10.27□□□□□ -0.77
CPSF7-225ENST00000545934 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.27□□□□□ -0.77
CPSF7-225ENST00000545934 TRAV26-2A0A0B4J265 109 aa10.27□□□□□ -0.77
CPSF7-225ENST00000545934 IGKV2-29A2NJV5 120 aaPredicted RBP10.27□□□□□ -0.77
CPSF7-225ENST00000545934 GNG4P50150 75 aa10.27□□□□□ -0.77
CPSF7-225ENST00000545934 OR5A1Q8NGJ0 315 aa10.27□□□□□ -0.77
CPSF7-225ENST00000545934 GNG13Q9P2W3 67 aa10.27□□□□□ -0.77
CPSF7-225ENST00000545934 TRAV1-1A0A0B4J248 108 aa10.26□□□□□ -0.77
CPSF7-225ENST00000545934 IGHV1-58A0A0C4DH39 117 aa10.26□□□□□ -0.77
CPSF7-225ENST00000545934 RNASEKQ6P5S7 137 aaKnown RBP10.26□□□□□ -0.77
CPSF7-225ENST00000545934 RPL39LQ96EH5 51 aaKnown RBP10.26□□□□□ -0.77
CPSF7-225ENST00000545934 LINC00526Q96FQ7 95 aa10.26□□□□□ -0.77
CPSF7-225ENST00000545934 CARD19Q96LW7 228 aa10.26□□□□□ -0.77
CPSF7-225ENST00000545934 HMSDA8MTL9 139 aa10.25□□□□□ -0.77
CPSF7-225ENST00000545934 BCL2L11O43521 198 aa10.25□□□□□ -0.77
CPSF7-225ENST00000545934 APCSP02743 223 aa10.25□□□□□ -0.77
CPSF7-225ENST00000545934 ZNF25P17030 456 aaPredicted RBP10.25□□□□□ -0.77
CPSF7-225ENST00000545934 TWIST1Q15672 202 aa10.25□□□□□ -0.77
CPSF7-225ENST00000545934 LINC00959A0A1B0GUT2 108 aa10.24□□□□□ -0.77
CPSF7-225ENST00000545934 FAM231BA6NCW3 169 aa10.24□□□□□ -0.77
CPSF7-225ENST00000545934 XCL1P47992 114 aa10.24□□□□□ -0.77
CPSF7-225ENST00000545934 NUDT10Q8NFP7 164 aa10.24□□□□□ -0.77
CPSF7-225ENST00000545934 NUDT11Q96G61 164 aa10.24□□□□□ -0.77
CPSF7-225ENST00000545934 CCL25O15444 150 aa10.23□□□□□ -0.77
CPSF7-225ENST00000545934 PTTG1IPP53801 180 aa10.23□□□□□ -0.77
CPSF7-225ENST00000545934 BIN3Q9NQY0 253 aa10.23□□□□□ -0.77
CPSF7-225ENST00000545934 SDHAF1A6NFY7 115 aa10.22□□□□□ -0.77
CPSF7-225ENST00000545934 ESDP10768 282 aa10.22□□□□□ -0.77
CPSF7-225ENST00000545934 MEF2BQ02080 365 aaPredicted RBP10.22□□□□□ -0.77
CPSF7-225ENST00000545934 SYCNQ0VAF6 134 aa10.22□□□□□ -0.77
CPSF7-225ENST00000545934 KANTRA0A1W2PQU2 76 aa10.21□□□□□ -0.77
CPSF7-225ENST00000545934 PDE6DO43924 150 aa10.21□□□□□ -0.77
CPSF7-225ENST00000545934 FOXA3P55318 350 aaPredicted RBP10.21□□□□□ -0.77
CPSF7-225ENST00000545934 TRBV6-5A0A0K0K1A5 114 aa10.2□□□□□ -0.78
CPSF7-225ENST00000545934 A0A1W2PNN7 141 aa10.2□□□□□ -0.78
CPSF7-225ENST00000545934 I3L3M4 83 aa10.2□□□□□ -0.78
CPSF7-225ENST00000545934 EIF5AP63241 154 aaKnown RBP10.2□□□□□ -0.78
CPSF7-225ENST00000545934 TEX261Q6UWH6 196 aa10.2□□□□□ -0.78
CPSF7-225ENST00000545934 CD164L2Q6UWJ8 174 aa10.2□□□□□ -0.78
CPSF7-225ENST00000545934 RPP21Q9H633 154 aaKnown RBP10.2□□□□□ -0.78
CPSF7-225ENST00000545934 MUC2Q02817 5179 aa10.19□□□□□ -0.78
CPSF7-225ENST00000545934 LOC107984640A0A0U1RRK4 108 aa10.19□□□□□ -0.78
CPSF7-225ENST00000545934 ZNF561-AS1K7EIQ3 104 aa10.19□□□□□ -0.78
CPSF7-225ENST00000545934 CAMPP49913 170 aa10.19□□□□□ -0.78
CPSF7-225ENST00000545934 TMEM101Q96IK0 257 aa10.19□□□□□ -0.78
CPSF7-225ENST00000545934 BTF3L4Q96K17 158 aa10.19□□□□□ -0.78
CPSF7-225ENST00000545934 BATF3Q9NR55 127 aa10.19□□□□□ -0.78
CPSF7-225ENST00000545934 CDC42SE2Q9NRR3 84 aa10.19□□□□□ -0.78
CPSF7-225ENST00000545934 MED9Q9NWA0 146 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms