RNA–Protein interactions for RNA: ENST00000545605.1

SCNN1A-223, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-223ENST00000545605 C11orf45Q8TAV5 145 aa8.12□□□□□ -1.11
SCNN1A-223ENST00000545605 TOMM6Q96B49 74 aa8.12□□□□□ -1.11
SCNN1A-223ENST00000545605 F5H768 121 aa8.11□□□□□ -1.11
SCNN1A-223ENST00000545605 PAX4O43316 350 aa8.11□□□□□ -1.11
SCNN1A-223ENST00000545605 GYPEP15421 78 aa8.11□□□□□ -1.11
SCNN1A-223ENST00000545605 BTF3P20290 206 aaKnown RBP8.11□□□□□ -1.11
SCNN1A-223ENST00000545605 C2orf66Q6UXQ4 117 aa8.11□□□□□ -1.11
SCNN1A-223ENST00000545605 VSIG2Q96IQ7 327 aa8.11□□□□□ -1.11
SCNN1A-223ENST00000545605 GTSF1LQ9H1H1 148 aa8.11□□□□□ -1.11
SCNN1A-223ENST00000545605 ATP5LO75964 103 aa8.1□□□□□ -1.11
SCNN1A-223ENST00000545605 HTN3P15516 51 aa8.1□□□□□ -1.11
SCNN1A-223ENST00000545605 DEFA6Q01524 100 aa8.1□□□□□ -1.11
SCNN1A-223ENST00000545605 C20orf203Q8NBC4 194 aa8.1□□□□□ -1.11
SCNN1A-223ENST00000545605 PHLDA1Q8WV24 401 aaPredicted RBP8.1□□□□□ -1.11
SCNN1A-223ENST00000545605 ICOSQ9Y6W8 199 aa8.1□□□□□ -1.11
SCNN1A-223ENST00000545605 DNHD1Q96M86 4753 aa8.1□□□□□ -1.11
SCNN1A-223ENST00000545605 NBEAL2Q6ZNJ1 2754 aa8.09□□□□□ -1.11
SCNN1A-223ENST00000545605 IGHV3-38A0A0C4DH36 116 aa8.09□□□□□ -1.11
SCNN1A-223ENST00000545605 C3orf79P0CE67 100 aa8.09□□□□□ -1.11
SCNN1A-223ENST00000545605 NANOS2P60321 138 aaKnown RBP8.09□□□□□ -1.11
SCNN1A-223ENST00000545605 LINC00173Q6ZV60 143 aa8.09□□□□□ -1.11
SCNN1A-223ENST00000545605 SH2D6Q7Z4S9 175 aa8.09□□□□□ -1.11
SCNN1A-223ENST00000545605 TIMM17AQ99595 171 aa8.09□□□□□ -1.11
SCNN1A-223ENST00000545605 CHCHD7Q9BUK0 85 aa8.09□□□□□ -1.11
SCNN1A-223ENST00000545605 TRAV10A0A0B4J240 114 aa8.08□□□□□ -1.12
SCNN1A-223ENST00000545605 NPSP0C0P6 89 aa8.08□□□□□ -1.12
SCNN1A-223ENST00000545605 KRTDAPP60985 99 aa8.08□□□□□ -1.12
SCNN1A-223ENST00000545605 JOSD1Q15040 202 aaPredicted RBP8.08□□□□□ -1.12
SCNN1A-223ENST00000545605 IFI27L1Q96BM0 104 aa8.08□□□□□ -1.12
SCNN1A-223ENST00000545605 MAP1LC3CQ9BXW4 147 aa8.08□□□□□ -1.12
SCNN1A-223ENST00000545605 TRBV25-1A0A075B6N4 114 aa8.07□□□□□ -1.12
SCNN1A-223ENST00000545605 A0A0J9YY99 117 aa8.07□□□□□ -1.12
SCNN1A-223ENST00000545605 SYS1-DBNDD2H3BUS1 97 aa8.07□□□□□ -1.12
SCNN1A-223ENST00000545605 MRPL23Q16540 153 aaKnown RBP8.07□□□□□ -1.12
SCNN1A-223ENST00000545605 PYY3Q5JQD4 70 aa8.07□□□□□ -1.12
SCNN1A-223ENST00000545605 ERASQ7Z444 233 aa8.07□□□□□ -1.12
SCNN1A-223ENST00000545605 SPATA12Q7Z6I5 190 aa8.07□□□□□ -1.12
SCNN1A-223ENST00000545605 ATP6V0E2Q8NHE4 81 aa8.07□□□□□ -1.12
SCNN1A-223ENST00000545605 SPANXA1Q9NS26 97 aa8.07□□□□□ -1.12
SCNN1A-223ENST00000545605 DEFB131BA0A096LNP1 70 aa8.06□□□□□ -1.12
SCNN1A-223ENST00000545605 TRBV6-8A0A0A6YYG3 113 aa8.06□□□□□ -1.12
SCNN1A-223ENST00000545605 C20orf202A1L168 122 aa8.06□□□□□ -1.12
SCNN1A-223ENST00000545605 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.06□□□□□ -1.12
SCNN1A-223ENST00000545605 H7C423 109 aa8.06□□□□□ -1.12
SCNN1A-223ENST00000545605 RPL39P62891 51 aaKnown RBP8.06□□□□□ -1.12
SCNN1A-223ENST00000545605 SMAGPQ0VAQ4 97 aa8.06□□□□□ -1.12
SCNN1A-223ENST00000545605 PET117Q6UWS5 81 aa8.06□□□□□ -1.12
SCNN1A-223ENST00000545605 NTM-AS1Q6ZSK4 140 aa8.06□□□□□ -1.12
SCNN1A-223ENST00000545605 TMEM141Q96I45 108 aa8.06□□□□□ -1.12
SCNN1A-223ENST00000545605 SCGB3A1Q96QR1 104 aa8.06□□□□□ -1.12
SCNN1A-223ENST00000545605 TMEM243Q9BU79 118 aa8.06□□□□□ -1.12
SCNN1A-223ENST00000545605 TIMM21Q9BVV7 248 aa8.06□□□□□ -1.12
SCNN1A-223ENST00000545605 PYGO1Q9Y3Y4 419 aa8.06□□□□□ -1.12
SCNN1A-223ENST00000545605 A0A096LPF7 62 aa8.05□□□□□ -1.12
SCNN1A-223ENST00000545605 IGIPA6NJ69 53 aa8.05□□□□□ -1.12
SCNN1A-223ENST00000545605 TIRAPP58753 221 aa8.05□□□□□ -1.12
SCNN1A-223ENST00000545605 LINC01545Q5VT33 79 aa8.05□□□□□ -1.12
SCNN1A-223ENST00000545605 MRPL52Q86TS9 123 aaKnown RBP8.05□□□□□ -1.12
SCNN1A-223ENST00000545605 Q8N976 141 aa8.05□□□□□ -1.12
SCNN1A-223ENST00000545605 UBE2D4Q9Y2X8 147 aa8.05□□□□□ -1.12
SCNN1A-223ENST00000545605 TRAV12-1A0A0B4J245 112 aa8.04□□□□□ -1.12
SCNN1A-223ENST00000545605 ZNF25P17030 456 aaPredicted RBP8.04□□□□□ -1.12
SCNN1A-223ENST00000545605 PAPPA-AS1Q5QFB9 102 aa8.04□□□□□ -1.12
SCNN1A-223ENST00000545605 LGALS9CQ6DKI2 356 aa8.04□□□□□ -1.12
SCNN1A-223ENST00000545605 Q6ZN92 141 aa8.04□□□□□ -1.12
SCNN1A-223ENST00000545605 C15orf53Q8NAA6 179 aa8.04□□□□□ -1.12
SCNN1A-223ENST00000545605 DEFB104AQ8WTQ1 72 aa8.04□□□□□ -1.12
SCNN1A-223ENST00000545605 BAALCQ8WXS3 180 aa8.04□□□□□ -1.12
SCNN1A-223ENST00000545605 IGLV4-3A0A075B6K6 122 aa8.03□□□□□ -1.12
SCNN1A-223ENST00000545605 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.03□□□□□ -1.12
SCNN1A-223ENST00000545605 IGKV2-29A2NJV5 120 aaPredicted RBP8.03□□□□□ -1.12
SCNN1A-223ENST00000545605 UBE2L6O14933 153 aa8.03□□□□□ -1.12
SCNN1A-223ENST00000545605 MRPS36P82909 103 aaKnown RBP8.03□□□□□ -1.12
SCNN1A-223ENST00000545605 CSDC2Q9Y534 153 aaKnown RBP8.03□□□□□ -1.12
SCNN1A-223ENST00000545605 HUWE1Q7Z6Z7 4374 aaKnown RBP8.03□□□□□ -1.12
SCNN1A-223ENST00000545605 MEGF8Q7Z7M0 2845 aa8.02□□□□□ -1.13
SCNN1A-223ENST00000545605 PKIAP61925 76 aa8.02□□□□□ -1.13
SCNN1A-223ENST00000545605 ODF1Q14990 250 aa8.02□□□□□ -1.13
SCNN1A-223ENST00000545605 Q6ZUT4 128 aa8.02□□□□□ -1.13
SCNN1A-223ENST00000545605 H0Y8G0 127 aa8.01□□□□□ -1.13
SCNN1A-223ENST00000545605 SCGB1D1O95968 90 aa8.01□□□□□ -1.13
SCNN1A-223ENST00000545605 FGF6P10767 208 aa8.01□□□□□ -1.13
SCNN1A-223ENST00000545605 LELP1Q5T871 98 aa8.01□□□□□ -1.13
SCNN1A-223ENST00000545605 TEX43Q6ZNM6 134 aa8.01□□□□□ -1.13
SCNN1A-223ENST00000545605 A0A087WX48 190 aa8□□□□□ -1.13
SCNN1A-223ENST00000545605 F8VRH5 84 aa8□□□□□ -1.13
SCNN1A-223ENST00000545605 PMVKQ15126 192 aa8□□□□□ -1.13
SCNN1A-223ENST00000545605 LINC00518Q8N0U6 118 aa8□□□□□ -1.13
SCNN1A-223ENST00000545605 C12orf57Q99622 126 aa8□□□□□ -1.13
SCNN1A-223ENST00000545605 CHCHD5Q9BSY4 110 aa8□□□□□ -1.13
SCNN1A-223ENST00000545605 PRSS1P07477 247 aa7.99□□□□□ -1.13
SCNN1A-223ENST00000545605 PLNP26678 52 aa7.99□□□□□ -1.13
SCNN1A-223ENST00000545605 AMMECR1LQ6DCA0 310 aa7.99□□□□□ -1.13
SCNN1A-223ENST00000545605 OR5A1Q8NGJ0 315 aa7.99□□□□□ -1.13
SCNN1A-223ENST00000545605 AMELXQ99217 191 aa7.99□□□□□ -1.13
SCNN1A-223ENST00000545605 DNAH9Q9NYC9 4486 aa7.98□□□□□ -1.13
SCNN1A-223ENST00000545605 STAB2Q8WWQ8 2551 aa7.98□□□□□ -1.13
SCNN1A-223ENST00000545605 COL7A1Q02388 2944 aa7.98□□□□□ -1.13
SCNN1A-223ENST00000545605 NUPR2A6NF83 97 aa7.98□□□□□ -1.13
SCNN1A-223ENST00000545605 DGAT2L7PQ6IED9 249 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms