RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 HMCN2Q8NDA2 5059 aa13.66□□□□□ -0.22
SCARB1-210ENST00000545493 IGLV4-60A0A075B6I1 120 aa13.66□□□□□ -0.22
SCARB1-210ENST00000545493 ALKAL2Q6UX46 152 aa13.66□□□□□ -0.22
SCARB1-210ENST00000545493 GTSF1Q8WW33 167 aa13.66□□□□□ -0.22
SCARB1-210ENST00000545493 IGLV10-54A0A075B6I4 117 aa13.65□□□□□ -0.22
SCARB1-210ENST00000545493 TRAV26-2A0A0B4J265 109 aa13.65□□□□□ -0.22
SCARB1-210ENST00000545493 TWIST1Q15672 202 aa13.65□□□□□ -0.22
SCARB1-210ENST00000545493 hCG_2014768A0A024R1R8 64 aa13.64□□□□□ -0.23
SCARB1-210ENST00000545493 GATD1Q8NB37 220 aa13.64□□□□□ -0.23
SCARB1-210ENST00000545493 A0A1B0GUV1 79 aa13.63□□□□□ -0.23
SCARB1-210ENST00000545493 TMEM250H0YL14 139 aa13.62□□□□□ -0.23
SCARB1-210ENST00000545493 AMTP48728 403 aa13.62□□□□□ -0.23
SCARB1-210ENST00000545493 COTL1Q14019 142 aa13.62□□□□□ -0.23
SCARB1-210ENST00000545493 LYPD6BQ8NI32 183 aa13.62□□□□□ -0.23
SCARB1-210ENST00000545493 C9orf163Q8N9P6 203 aa13.61□□□□□ -0.23
SCARB1-210ENST00000545493 RPL39LQ96EH5 51 aaKnown RBP13.61□□□□□ -0.23
SCARB1-210ENST00000545493 UBE2L6O14933 153 aa13.6□□□□□ -0.23
SCARB1-210ENST00000545493 FOXA3P55318 350 aaPredicted RBP13.6□□□□□ -0.23
SCARB1-210ENST00000545493 BLOC1S1P78537 153 aa13.6□□□□□ -0.23
SCARB1-210ENST00000545493 DGAT2L7PQ6IED9 249 aa13.6□□□□□ -0.23
SCARB1-210ENST00000545493 FAM231DQ6ZW35 169 aa13.6□□□□□ -0.23
SCARB1-210ENST00000545493 TRAV8-4A0A0B4J246 113 aa13.59□□□□□ -0.23
SCARB1-210ENST00000545493 KRTAP29-1A8MX34 341 aaPredicted RBP13.59□□□□□ -0.23
SCARB1-210ENST00000545493 PANO1I0J062 215 aa13.59□□□□□ -0.23
SCARB1-210ENST00000545493 J3QL48 77 aa13.59□□□□□ -0.23
SCARB1-210ENST00000545493 GATCO43716 136 aaKnown RBP13.59□□□□□ -0.23
SCARB1-210ENST00000545493 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.59□□□□□ -0.23
SCARB1-210ENST00000545493 CNBPP62633 177 aaKnown RBP13.57□□□□□ -0.24
SCARB1-210ENST00000545493 CLRN3Q8NCR9 226 aa13.57□□□□□ -0.24
SCARB1-210ENST00000545493 CEBPGP53567 150 aa13.56□□□□□ -0.24
SCARB1-210ENST00000545493 CT83Q5H943 113 aa13.56□□□□□ -0.24
SCARB1-210ENST00000545493 hDV102S1A0JD36 115 aa13.55□□□□□ -0.24
SCARB1-210ENST00000545493 SDIM1Q6ZPB5 146 aa13.54□□□□□ -0.24
SCARB1-210ENST00000545493 SMIM15Q7Z3B0 74 aa13.54□□□□□ -0.24
SCARB1-210ENST00000545493 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.53□□□□□ -0.24
SCARB1-210ENST00000545493 IGKV2-29A2NJV5 120 aaPredicted RBP13.53□□□□□ -0.24
SCARB1-210ENST00000545493 SDHAF1A6NFY7 115 aa13.53□□□□□ -0.24
SCARB1-210ENST00000545493 A8MWL6 223 aa13.53□□□□□ -0.24
SCARB1-210ENST00000545493 NCR2O95944 276 aa13.53□□□□□ -0.24
SCARB1-210ENST00000545493 APCSP02743 223 aa13.53□□□□□ -0.24
SCARB1-210ENST00000545493 SLPIP03973 132 aa13.53□□□□□ -0.24
SCARB1-210ENST00000545493 LINC01551Q86U37 167 aa13.53□□□□□ -0.24
SCARB1-210ENST00000545493 C15orf56Q8N910 161 aa13.53□□□□□ -0.24
SCARB1-210ENST00000545493 GAS8-AS1O95177 125 aa13.52□□□□□ -0.25
SCARB1-210ENST00000545493 SMIM7Q9BQ49 75 aa13.52□□□□□ -0.25
SCARB1-210ENST00000545493 IGKV3OR2-268A0A0C4DH90 116 aa13.51□□□□□ -0.25
SCARB1-210ENST00000545493 GAGE12HA6NDE8 117 aa13.51□□□□□ -0.25
SCARB1-210ENST00000545493 RPL37AP61513 92 aaKnown RBP13.51□□□□□ -0.25
SCARB1-210ENST00000545493 CIRBPQ14011 172 aaKnown RBP13.51□□□□□ -0.25
SCARB1-210ENST00000545493 TEX261Q6UWH6 196 aa13.51□□□□□ -0.25
SCARB1-210ENST00000545493 FAM210AQ96ND0 272 aa13.51□□□□□ -0.25
SCARB1-210ENST00000545493 TRBV6-5A0A0K0K1A5 114 aa13.5□□□□□ -0.25
SCARB1-210ENST00000545493 NDUFS6O75380 124 aaKnown RBP13.5□□□□□ -0.25
SCARB1-210ENST00000545493 HNRNPA3P51991 378 aaKnown RBP13.5□□□□□ -0.25
SCARB1-210ENST00000545493 EIF5A2Q9GZV4 153 aaKnown RBP13.5□□□□□ -0.25
SCARB1-210ENST00000545493 HIGD1CA8MV81 97 aa13.49□□□□□ -0.25
SCARB1-210ENST00000545493 FGF6P10767 208 aa13.49□□□□□ -0.25
SCARB1-210ENST00000545493 AMMECR1LQ6DCA0 310 aa13.49□□□□□ -0.25
SCARB1-210ENST00000545493 TSKUQ8WUA8 353 aa13.49□□□□□ -0.25
SCARB1-210ENST00000545493 H7C423 109 aa13.48□□□□□ -0.25
SCARB1-210ENST00000545493 SRP19P09132 144 aaKnown RBP13.48□□□□□ -0.25
SCARB1-210ENST00000545493 RNASEKQ6P5S7 137 aaKnown RBP13.48□□□□□ -0.25
SCARB1-210ENST00000545493 AP5S1Q9NUS5 200 aa13.48□□□□□ -0.25
SCARB1-210ENST00000545493 IGHV3-64A0A075B6Q5 118 aa13.47□□□□□ -0.25
SCARB1-210ENST00000545493 FAM231BA6NCW3 169 aa13.47□□□□□ -0.25
SCARB1-210ENST00000545493 I3L3M4 83 aa13.47□□□□□ -0.25
SCARB1-210ENST00000545493 CHTF8P0CG12 524 aa13.47□□□□□ -0.25
SCARB1-210ENST00000545493 CHCHD10Q8WYQ3 142 aaPredicted RBP13.47□□□□□ -0.25
SCARB1-210ENST00000545493 BORCS7Q96B45 105 aa13.47□□□□□ -0.25
SCARB1-210ENST00000545493 RNF185Q96GF1 192 aa13.47□□□□□ -0.25
SCARB1-210ENST00000545493 OSTCQ9NRP0 149 aa13.47□□□□□ -0.25
SCARB1-210ENST00000545493 A0A1B0GUT8 65 aa13.46□□□□□ -0.25
SCARB1-210ENST00000545493 ZNF727A8MUV8 499 aa13.46□□□□□ -0.25
SCARB1-210ENST00000545493 TSHBP01222 138 aa13.46□□□□□ -0.25
SCARB1-210ENST00000545493 RPS10P46783 165 aaKnown RBP13.46□□□□□ -0.25
SCARB1-210ENST00000545493 TMEM191AQ9H0A3 160 aa13.46□□□□□ -0.25
SCARB1-210ENST00000545493 TMEM242Q9NWH2 141 aa13.46□□□□□ -0.25
SCARB1-210ENST00000545493 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.45□□□□□ -0.26
SCARB1-210ENST00000545493 A0A1B0GVG6 124 aa13.45□□□□□ -0.26
SCARB1-210ENST00000545493 ESDP10768 282 aa13.45□□□□□ -0.26
SCARB1-210ENST00000545493 HIGD2BQ4VC39 106 aa13.45□□□□□ -0.26
SCARB1-210ENST00000545493 SPACA4Q8TDM5 124 aa13.45□□□□□ -0.26
SCARB1-210ENST00000545493 V9GYV3 84 aa13.45□□□□□ -0.26
SCARB1-210ENST00000545493 TNXBP22105 4242 aa13.44□□□□□ -0.26
SCARB1-210ENST00000545493 ZNF25P17030 456 aaPredicted RBP13.44□□□□□ -0.26
SCARB1-210ENST00000545493 PMCHP20382 165 aa13.44□□□□□ -0.26
SCARB1-210ENST00000545493 AMN1Q8IY45 258 aa13.44□□□□□ -0.26
SCARB1-210ENST00000545493 ST20Q9HBF5 79 aa13.44□□□□□ -0.26
SCARB1-210ENST00000545493 OXTP01178 125 aa13.43□□□□□ -0.26
SCARB1-210ENST00000545493 FOXI1Q12951 378 aa13.43□□□□□ -0.26
SCARB1-210ENST00000545493 GVQW2A0A096LPI5 108 aaPredicted RBP13.42□□□□□ -0.26
SCARB1-210ENST00000545493 RAB4AP20338 218 aa13.42□□□□□ -0.26
SCARB1-210ENST00000545493 POLR2KP53803 58 aaKnown RBP13.42□□□□□ -0.26
SCARB1-210ENST00000545493 OR5A1Q8NGJ0 315 aa13.42□□□□□ -0.26
SCARB1-210ENST00000545493 ISOC2Q96AB3 205 aa13.42□□□□□ -0.26
SCARB1-210ENST00000545493 SMKR1H3BMG3 65 aa13.41□□□□□ -0.26
SCARB1-210ENST00000545493 CFAP161Q6P656 301 aa13.41□□□□□ -0.26
SCARB1-210ENST00000545493 NUP35Q8NFH5 326 aa13.41□□□□□ -0.26
SCARB1-210ENST00000545493 MRAP2Q96G30 205 aa13.41□□□□□ -0.26
SCARB1-210ENST00000545493 A0A087WYN8 130 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms