RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 MRPS16Q9Y3D3 137 aaKnown RBP8.15□□□□□ -1.1
LTBR-214ENST00000545445 TRAPPC1Q9Y5R8 145 aa8.15□□□□□ -1.1
LTBR-214ENST00000545445 DNAH5Q8TE73 4624 aa8.14□□□□□ -1.11
LTBR-214ENST00000545445 SMKR1H3BMG3 65 aa8.14□□□□□ -1.11
LTBR-214ENST00000545445 VCYO14598 125 aa8.14□□□□□ -1.11
LTBR-214ENST00000545445 TCAPO15273 167 aa8.14□□□□□ -1.11
LTBR-214ENST00000545445 TNFRSF6BO95407 300 aa8.14□□□□□ -1.11
LTBR-214ENST00000545445 POLR2KP53803 58 aaKnown RBP8.14□□□□□ -1.11
LTBR-214ENST00000545445 FABP9Q0Z7S8 132 aa8.14□□□□□ -1.11
LTBR-214ENST00000545445 LELP1Q5T871 98 aa8.14□□□□□ -1.11
LTBR-214ENST00000545445 UPK3BQ9BT76 320 aa8.14□□□□□ -1.11
LTBR-214ENST00000545445 TMEM70Q9BUB7 260 aa8.14□□□□□ -1.11
LTBR-214ENST00000545445 LINC00588Q9Y4M8 146 aa8.14□□□□□ -1.11
LTBR-214ENST00000545445 TRAV8-6A0A0B4J262 113 aa8.13□□□□□ -1.11
LTBR-214ENST00000545445 TRBV27A0A0K0K1C4 114 aa8.13□□□□□ -1.11
LTBR-214ENST00000545445 COLCA2A8K830 154 aa8.13□□□□□ -1.11
LTBR-214ENST00000545445 I3L3M4 83 aa8.13□□□□□ -1.11
LTBR-214ENST00000545445 GAS8-AS1O95177 125 aa8.13□□□□□ -1.11
LTBR-214ENST00000545445 PMCHP20382 165 aa8.13□□□□□ -1.11
LTBR-214ENST00000545445 COTL1Q14019 142 aa8.13□□□□□ -1.11
LTBR-214ENST00000545445 TRBV6-8A0A0A6YYG3 113 aa8.12□□□□□ -1.11
LTBR-214ENST00000545445 PRSS47A8MTI9 375 aa8.12□□□□□ -1.11
LTBR-214ENST00000545445 SCO1O75880 301 aa8.12□□□□□ -1.11
LTBR-214ENST00000545445 NPYP01303 97 aa8.12□□□□□ -1.11
LTBR-214ENST00000545445 PKIAP61925 76 aa8.12□□□□□ -1.11
LTBR-214ENST00000545445 MAPKAPK5-AS1Q8N8E1 139 aa8.12□□□□□ -1.11
LTBR-214ENST00000545445 KIR2DL4Q99706 377 aa8.12□□□□□ -1.11
LTBR-214ENST00000545445 MAP1LC3AQ9H492 121 aa8.12□□□□□ -1.11
LTBR-214ENST00000545445 TRBV25-1A0A075B6N4 114 aa8.11□□□□□ -1.11
LTBR-214ENST00000545445 IGHV1-24A0A0C4DH33 117 aa8.11□□□□□ -1.11
LTBR-214ENST00000545445 IGHV3-38A0A0C4DH36 116 aa8.11□□□□□ -1.11
LTBR-214ENST00000545445 RAB5AP20339 215 aa8.11□□□□□ -1.11
LTBR-214ENST00000545445 IQCJQ1A5X6 159 aa8.11□□□□□ -1.11
LTBR-214ENST00000545445 KIAA1644Q3SXP7 199 aa8.11□□□□□ -1.11
LTBR-214ENST00000545445 ALKBH7Q9BT30 221 aaPredicted RBP8.11□□□□□ -1.11
LTBR-214ENST00000545445 SMIM2Q9BVW6 85 aa8.11□□□□□ -1.11
LTBR-214ENST00000545445 K7EP13 123 aa8.1□□□□□ -1.11
LTBR-214ENST00000545445 NXT2Q9NPJ8 142 aaKnown RBP8.1□□□□□ -1.11
LTBR-214ENST00000545445 K7EMI3 77 aa8.09□□□□□ -1.11
LTBR-214ENST00000545445 SIVA1O15304 175 aa8.09□□□□□ -1.11
LTBR-214ENST00000545445 FCER1GP30273 86 aa8.09□□□□□ -1.11
LTBR-214ENST00000545445 NTM-AS1Q6ZSK4 140 aa8.09□□□□□ -1.11
LTBR-214ENST00000545445 TMEM243Q9BU79 118 aa8.09□□□□□ -1.11
LTBR-214ENST00000545445 CHCHD7Q9BUK0 85 aa8.09□□□□□ -1.11
LTBR-214ENST00000545445 Q9H8V8 135 aa8.09□□□□□ -1.11
LTBR-214ENST00000545445 H7C423 109 aa8.08□□□□□ -1.12
LTBR-214ENST00000545445 TSHBP01222 138 aa8.08□□□□□ -1.12
LTBR-214ENST00000545445 AMTP48728 403 aa8.08□□□□□ -1.12
LTBR-214ENST00000545445 Q8N8P6 123 aa8.08□□□□□ -1.12
LTBR-214ENST00000545445 IGLV2-18A0A075B6J9 118 aa8.07□□□□□ -1.12
LTBR-214ENST00000545445 TRAV9-2A0A087WT02 112 aa8.07□□□□□ -1.12
LTBR-214ENST00000545445 LOC389332A0A1B0GUA5 103 aa8.07□□□□□ -1.12
LTBR-214ENST00000545445 DNAH10OSP0CZ25 163 aa8.07□□□□□ -1.12
LTBR-214ENST00000545445 SMAGPQ0VAQ4 97 aa8.07□□□□□ -1.12
LTBR-214ENST00000545445 CHCHD5Q9BSY4 110 aa8.07□□□□□ -1.12
LTBR-214ENST00000545445 A0A087WX48 190 aa8.06□□□□□ -1.12
LTBR-214ENST00000545445 C16orf90A8MZG2 172 aa8.06□□□□□ -1.12
LTBR-214ENST00000545445 UBE2L6O14933 153 aa8.06□□□□□ -1.12
LTBR-214ENST00000545445 CDK2AP2O75956 126 aa8.06□□□□□ -1.12
LTBR-214ENST00000545445 TRGC2P03986 189 aa8.06□□□□□ -1.12
LTBR-214ENST00000545445 ESDP10768 282 aa8.06□□□□□ -1.12
LTBR-214ENST00000545445 G0S2P27469 103 aa8.06□□□□□ -1.12
LTBR-214ENST00000545445 TTC32Q5I0X7 151 aa8.06□□□□□ -1.12
LTBR-214ENST00000545445 LINC01556Q5JQF7 62 aa8.06□□□□□ -1.12
LTBR-214ENST00000545445 NIT1Q86X76 327 aa8.06□□□□□ -1.12
LTBR-214ENST00000545445 WFDC10BQ8IUB3 73 aa8.06□□□□□ -1.12
LTBR-214ENST00000545445 C10orf126Q8N4M7 172 aa8.06□□□□□ -1.12
LTBR-214ENST00000545445 PRSS3P2Q8NHM4 247 aa8.06□□□□□ -1.12
LTBR-214ENST00000545445 TMEM18Q96B42 140 aa8.06□□□□□ -1.12
LTBR-214ENST00000545445 TMEM262E9PQX1 116 aa8.05□□□□□ -1.12
LTBR-214ENST00000545445 RAB5BP61020 215 aa8.05□□□□□ -1.12
LTBR-214ENST00000545445 ORMDL2Q53FV1 153 aa8.05□□□□□ -1.12
LTBR-214ENST00000545445 A0A1B0GUV1 79 aa8.04□□□□□ -1.12
LTBR-214ENST00000545445 BTF3P20290 206 aaKnown RBP8.04□□□□□ -1.12
LTBR-214ENST00000545445 IFI27P40305 119 aaPredicted RBP8.04□□□□□ -1.12
LTBR-214ENST00000545445 Q6ZR54 194 aa8.04□□□□□ -1.12
LTBR-214ENST00000545445 Q8N1X5 172 aa8.04□□□□□ -1.12
LTBR-214ENST00000545445 C18orf32Q8TCD1 76 aa8.04□□□□□ -1.12
LTBR-214ENST00000545445 NBDYA0A0U1RRE5 68 aa8.03□□□□□ -1.12
LTBR-214ENST00000545445 LINC01546A6NGU7 62 aa8.03□□□□□ -1.12
LTBR-214ENST00000545445 LINC01549A6NIU2 74 aa8.03□□□□□ -1.12
LTBR-214ENST00000545445 ZNF25P17030 456 aaPredicted RBP8.03□□□□□ -1.12
LTBR-214ENST00000545445 GAGE6Q13070 117 aa8.03□□□□□ -1.12
LTBR-214ENST00000545445 LAGE3Q14657 143 aa8.03□□□□□ -1.12
LTBR-214ENST00000545445 FA2HQ7L5A8 372 aa8.03□□□□□ -1.12
LTBR-214ENST00000545445 C20orf203Q8NBC4 194 aa8.03□□□□□ -1.12
LTBR-214ENST00000545445 DEFB104AQ8WTQ1 72 aa8.03□□□□□ -1.12
LTBR-214ENST00000545445 Q0VG73 95 aa8.02□□□□□ -1.13
LTBR-214ENST00000545445 AMMECR1LQ6DCA0 310 aa8.02□□□□□ -1.13
LTBR-214ENST00000545445 MRPL52Q86TS9 123 aaKnown RBP8.02□□□□□ -1.13
LTBR-214ENST00000545445 TIMM21Q9BVV7 248 aa8.02□□□□□ -1.13
LTBR-214ENST00000545445 AP5S1Q9NUS5 200 aa8.02□□□□□ -1.13
LTBR-214ENST00000545445 DMBT1Q9UGM3 2413 aaPredicted RBP8.01□□□□□ -1.13
LTBR-214ENST00000545445 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.01□□□□□ -1.13
LTBR-214ENST00000545445 IGKV2-29A2NJV5 120 aaPredicted RBP8.01□□□□□ -1.13
LTBR-214ENST00000545445 IGHV3-30P01768 117 aa8.01□□□□□ -1.13
LTBR-214ENST00000545445 IGHV3-33P01772 117 aa8.01□□□□□ -1.13
LTBR-214ENST00000545445 LINC00614P0C842 121 aa8.01□□□□□ -1.13
LTBR-214ENST00000545445 IGHV3-30-3P0DP02 117 aa8.01□□□□□ -1.13
LTBR-214ENST00000545445 IGHV3-30-5P0DP03 117 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms