RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 H7C423 109 aa8.02□□□□□ -1.13
SNHG1-221ENST00000544983 GAS8-AS1O95177 125 aa8.02□□□□□ -1.13
SNHG1-221ENST00000544983 AMTP48728 403 aa8.02□□□□□ -1.13
SNHG1-221ENST00000544983 NTM-AS1Q6ZSK4 140 aa8.02□□□□□ -1.13
SNHG1-221ENST00000544983 WFDC10BQ8IUB3 73 aa8.02□□□□□ -1.13
SNHG1-221ENST00000544983 TMEM243Q9BU79 118 aa8.02□□□□□ -1.13
SNHG1-221ENST00000544983 ALMS1Q8TCU4 4167 aa8.01□□□□□ -1.13
SNHG1-221ENST00000544983 A0A087WX48 190 aa8.01□□□□□ -1.13
SNHG1-221ENST00000544983 K7EMI3 77 aa8.01□□□□□ -1.13
SNHG1-221ENST00000544983 Q6ZR54 194 aa8.01□□□□□ -1.13
SNHG1-221ENST00000544983 NIT1Q86X76 327 aa8.01□□□□□ -1.13
SNHG1-221ENST00000544983 CBLN2Q8IUK8 224 aa8.01□□□□□ -1.13
SNHG1-221ENST00000544983 CHCHD5Q9BSY4 110 aa8.01□□□□□ -1.13
SNHG1-221ENST00000544983 SMIM2Q9BVW6 85 aa8.01□□□□□ -1.13
SNHG1-221ENST00000544983 MAP1LC3AQ9H492 121 aa8.01□□□□□ -1.13
SNHG1-221ENST00000544983 IGLV2-18A0A075B6J9 118 aa8□□□□□ -1.13
SNHG1-221ENST00000544983 NPYP01303 97 aa8□□□□□ -1.13
SNHG1-221ENST00000544983 FCER1GP30273 86 aa8□□□□□ -1.13
SNHG1-221ENST00000544983 SMAGPQ0VAQ4 97 aa8□□□□□ -1.13
SNHG1-221ENST00000544983 FABP9Q0Z7S8 132 aa8□□□□□ -1.13
SNHG1-221ENST00000544983 MRPL18Q9H0U6 180 aaKnown RBP8□□□□□ -1.13
SNHG1-221ENST00000544983 TRAPPC1Q9Y5R8 145 aa8□□□□□ -1.13
SNHG1-221ENST00000544983 A0A1B0GUV1 79 aa7.99□□□□□ -1.13
SNHG1-221ENST00000544983 TMEM262E9PQX1 116 aa7.99□□□□□ -1.13
SNHG1-221ENST00000544983 UBE2L6O14933 153 aa7.99□□□□□ -1.13
SNHG1-221ENST00000544983 TSHBP01222 138 aa7.99□□□□□ -1.13
SNHG1-221ENST00000544983 LAGE3Q14657 143 aa7.99□□□□□ -1.13
SNHG1-221ENST00000544983 TMEM18Q96B42 140 aa7.99□□□□□ -1.13
SNHG1-221ENST00000544983 NXT2Q9NPJ8 142 aaKnown RBP7.99□□□□□ -1.13
SNHG1-221ENST00000544983 RAB5AP20339 215 aa7.98□□□□□ -1.13
SNHG1-221ENST00000544983 NFE4Q86UQ8 179 aa7.98□□□□□ -1.13
SNHG1-221ENST00000544983 ALKBH7Q9BT30 221 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-221ENST00000544983 DNAH1Q9P2D7 4330 aa7.98□□□□□ -1.13
SNHG1-221ENST00000544983 VPS13DQ5THJ4 4388 aa7.97□□□□□ -1.13
SNHG1-221ENST00000544983 IBA57-AS1B1ANH7 110 aa7.97□□□□□ -1.13
SNHG1-221ENST00000544983 ATP6V1G1O75348 118 aa7.97□□□□□ -1.13
SNHG1-221ENST00000544983 ESDP10768 282 aa7.97□□□□□ -1.13
SNHG1-221ENST00000544983 ZNF25P17030 456 aaPredicted RBP7.97□□□□□ -1.13
SNHG1-221ENST00000544983 G0S2P27469 103 aa7.97□□□□□ -1.13
SNHG1-221ENST00000544983 KIAA1644Q3SXP7 199 aa7.97□□□□□ -1.13
SNHG1-221ENST00000544983 Q8N8P6 123 aa7.97□□□□□ -1.13
SNHG1-221ENST00000544983 PCLOQ9Y6V0 5065 aa7.96□□□□□ -1.13
SNHG1-221ENST00000544983 TRAV8-3A0A0A6YYJ7 113 aa7.96□□□□□ -1.14
SNHG1-221ENST00000544983 M0R2N4 97 aa7.96□□□□□ -1.14
SNHG1-221ENST00000544983 C1orf134Q5TEV5 83 aa7.96□□□□□ -1.14
SNHG1-221ENST00000544983 SACSQ9NZJ4 4579 aa7.96□□□□□ -1.14
SNHG1-221ENST00000544983 COLCA2A8K830 154 aa7.95□□□□□ -1.14
SNHG1-221ENST00000544983 IGHV3-30P01768 117 aa7.95□□□□□ -1.14
SNHG1-221ENST00000544983 IGHV3-33P01772 117 aa7.95□□□□□ -1.14
SNHG1-221ENST00000544983 IGHV3-30-3P0DP02 117 aa7.95□□□□□ -1.14
SNHG1-221ENST00000544983 IGHV3-30-5P0DP03 117 aa7.95□□□□□ -1.14
SNHG1-221ENST00000544983 RBX1P62877 108 aa7.95□□□□□ -1.14
SNHG1-221ENST00000544983 Q0VG73 95 aa7.95□□□□□ -1.14
SNHG1-221ENST00000544983 GAGE6Q13070 117 aa7.95□□□□□ -1.14
SNHG1-221ENST00000544983 ORMDL2Q53FV1 153 aa7.95□□□□□ -1.14
SNHG1-221ENST00000544983 MPV17L2Q567V2 206 aa7.95□□□□□ -1.14
SNHG1-221ENST00000544983 AMMECR1LQ6DCA0 310 aa7.95□□□□□ -1.14
SNHG1-221ENST00000544983 MRPL52Q86TS9 123 aaKnown RBP7.95□□□□□ -1.14
SNHG1-221ENST00000544983 C6orf223Q8N319 242 aa7.95□□□□□ -1.14
SNHG1-221ENST00000544983 CSDC2Q9Y534 153 aaKnown RBP7.95□□□□□ -1.14
SNHG1-221ENST00000544983 KMT2AQ03164 3969 aa7.95□□□□□ -1.14
SNHG1-221ENST00000544983 LOC389332A0A1B0GUA5 103 aa7.94□□□□□ -1.14
SNHG1-221ENST00000544983 LINC01549A6NIU2 74 aa7.94□□□□□ -1.14
SNHG1-221ENST00000544983 C20orf203Q8NBC4 194 aa7.94□□□□□ -1.14
SNHG1-221ENST00000544983 PRSS3P2Q8NHM4 247 aa7.94□□□□□ -1.14
SNHG1-221ENST00000544983 RMI2Q96E14 147 aa7.94□□□□□ -1.14
SNHG1-221ENST00000544983 TMEM101Q96IK0 257 aa7.94□□□□□ -1.14
SNHG1-221ENST00000544983 TIMM21Q9BVV7 248 aa7.94□□□□□ -1.14
SNHG1-221ENST00000544983 KRTAP1-5Q9BYS1 174 aa7.94□□□□□ -1.14
SNHG1-221ENST00000544983 COX11Q9Y6N1 276 aa7.94□□□□□ -1.14
SNHG1-221ENST00000544983 RYR1P21817 5038 aa7.94□□□□□ -1.14
SNHG1-221ENST00000544983 LINC01546A6NGU7 62 aa7.93□□□□□ -1.14
SNHG1-221ENST00000544983 ANGP03950 147 aaKnown RBP7.93□□□□□ -1.14
SNHG1-221ENST00000544983 FGF6P10767 208 aa7.93□□□□□ -1.14
SNHG1-221ENST00000544983 IFI27P40305 119 aaPredicted RBP7.93□□□□□ -1.14
SNHG1-221ENST00000544983 RAB5BP61020 215 aa7.93□□□□□ -1.14
SNHG1-221ENST00000544983 LINC00336Q6ZUF6 198 aa7.93□□□□□ -1.14
SNHG1-221ENST00000544983 OR5A1Q8NGJ0 315 aa7.93□□□□□ -1.14
SNHG1-221ENST00000544983 TM2D2Q9BX73 214 aa7.93□□□□□ -1.14
SNHG1-221ENST00000544983 KLK12Q9UKR0 248 aa7.93□□□□□ -1.14
SNHG1-221ENST00000544983 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.92□□□□□ -1.14
SNHG1-221ENST00000544983 IGKV2-29A2NJV5 120 aaPredicted RBP7.92□□□□□ -1.14
SNHG1-221ENST00000544983 CRPP02741 224 aa7.92□□□□□ -1.14
SNHG1-221ENST00000544983 MIAQ16674 131 aa7.92□□□□□ -1.14
SNHG1-221ENST00000544983 DGAT2L7PQ6IED9 249 aa7.92□□□□□ -1.14
SNHG1-221ENST00000544983 RNASEKQ6P5S7 137 aaKnown RBP7.92□□□□□ -1.14
SNHG1-221ENST00000544983 Q8N976 141 aa7.92□□□□□ -1.14
SNHG1-221ENST00000544983 DEFB104AQ8WTQ1 72 aa7.92□□□□□ -1.14
SNHG1-221ENST00000544983 SPANXA1Q9NS26 97 aa7.92□□□□□ -1.14
SNHG1-221ENST00000544983 PRR34Q9NV39 138 aa7.92□□□□□ -1.14
SNHG1-221ENST00000544983 TRAV8-4A0A0B4J246 113 aa7.91□□□□□ -1.14
SNHG1-221ENST00000544983 SCO1O75880 301 aa7.91□□□□□ -1.14
SNHG1-221ENST00000544983 NPSP0C0P6 89 aa7.91□□□□□ -1.14
SNHG1-221ENST00000544983 FA2HQ7L5A8 372 aa7.91□□□□□ -1.14
SNHG1-221ENST00000544983 Q8N3U1 123 aa7.91□□□□□ -1.14
SNHG1-221ENST00000544983 C18orf32Q8TCD1 76 aa7.91□□□□□ -1.14
SNHG1-221ENST00000544983 UBE2WQ96B02 151 aa7.91□□□□□ -1.14
SNHG1-221ENST00000544983 CYSLTR1Q9Y271 337 aa7.91□□□□□ -1.14
SNHG1-221ENST00000544983 PYGO1Q9Y3Y4 419 aa7.91□□□□□ -1.14
SNHG1-221ENST00000544983 DNAH6Q9C0G6 4158 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms