RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 SMIM15Q7Z3B0 74 aa7.52□□□□□ -1.21
YBX3-216ENST00000544622 C20orf203Q8NBC4 194 aa7.52□□□□□ -1.21
YBX3-216ENST00000544622 RMI2Q96E14 147 aa7.52□□□□□ -1.21
YBX3-216ENST00000544622 RPL39LQ96EH5 51 aaKnown RBP7.52□□□□□ -1.21
YBX3-216ENST00000544622 RNF185Q96GF1 192 aa7.52□□□□□ -1.21
YBX3-216ENST00000544622 IGKV2D-24A0A075B6R9 120 aa7.51□□□□□ -1.21
YBX3-216ENST00000544622 IGLV5-52A0A0A0MRZ9 124 aa7.51□□□□□ -1.21
YBX3-216ENST00000544622 SMIM27A0A1W2PRY6 76 aa7.51□□□□□ -1.21
YBX3-216ENST00000544622 ANGP03950 147 aaKnown RBP7.51□□□□□ -1.21
YBX3-216ENST00000544622 RAB4AP20338 218 aa7.51□□□□□ -1.21
YBX3-216ENST00000544622 GAGE6Q13070 117 aa7.51□□□□□ -1.21
YBX3-216ENST00000544622 ADIRFQ15847 76 aa7.51□□□□□ -1.21
YBX3-216ENST00000544622 MIAQ16674 131 aa7.51□□□□□ -1.21
YBX3-216ENST00000544622 Q8N1X5 172 aa7.51□□□□□ -1.21
YBX3-216ENST00000544622 BAALCQ8WXS3 180 aa7.51□□□□□ -1.21
YBX3-216ENST00000544622 NAT8BQ9UHF3 227 aa7.51□□□□□ -1.21
YBX3-216ENST00000544622 LECT2O14960 151 aa7.5□□□□□ -1.21
YBX3-216ENST00000544622 COTL1Q14019 142 aa7.5□□□□□ -1.21
YBX3-216ENST00000544622 LINC00269Q8N2A0 174 aa7.5□□□□□ -1.21
YBX3-216ENST00000544622 DEFB104AQ8WTQ1 72 aa7.5□□□□□ -1.21
YBX3-216ENST00000544622 BORCS7Q96B45 105 aa7.5□□□□□ -1.21
YBX3-216ENST00000544622 TMEM243Q9BU79 118 aa7.5□□□□□ -1.21
YBX3-216ENST00000544622 IGLV4-60A0A075B6I1 120 aa7.49□□□□□ -1.21
YBX3-216ENST00000544622 SDHAF1A6NFY7 115 aa7.49□□□□□ -1.21
YBX3-216ENST00000544622 NCR2O95944 276 aa7.49□□□□□ -1.21
YBX3-216ENST00000544622 POLR2KP53803 58 aaKnown RBP7.49□□□□□ -1.21
YBX3-216ENST00000544622 AMN1Q8IY45 258 aa7.49□□□□□ -1.21
YBX3-216ENST00000544622 C1orf43Q9BWL3 253 aa7.49□□□□□ -1.21
YBX3-216ENST00000544622 CRPP02741 224 aa7.48□□□□□ -1.21
YBX3-216ENST00000544622 RPS10P46783 165 aaKnown RBP7.48□□□□□ -1.21
YBX3-216ENST00000544622 REG3AQ06141 175 aa7.48□□□□□ -1.21
YBX3-216ENST00000544622 RIGQ13278 110 aa7.48□□□□□ -1.21
YBX3-216ENST00000544622 TRBV27A0A0K0K1C4 114 aa7.47□□□□□ -1.21
YBX3-216ENST00000544622 H7C423 109 aa7.47□□□□□ -1.21
YBX3-216ENST00000544622 I3L3M4 83 aa7.47□□□□□ -1.21
YBX3-216ENST00000544622 ESDP10768 282 aa7.47□□□□□ -1.21
YBX3-216ENST00000544622 AMTP48728 403 aa7.47□□□□□ -1.21
YBX3-216ENST00000544622 IFITM2Q01629 132 aa7.47□□□□□ -1.21
YBX3-216ENST00000544622 CLLU1Q5K131 121 aa7.47□□□□□ -1.21
YBX3-216ENST00000544622 Q6ZSA8 131 aa7.47□□□□□ -1.21
YBX3-216ENST00000544622 MRAP2Q96G30 205 aa7.47□□□□□ -1.21
YBX3-216ENST00000544622 TMEM70Q9BUB7 260 aa7.47□□□□□ -1.21
YBX3-216ENST00000544622 FAM30AQ9NZY2 134 aa7.47□□□□□ -1.21
YBX3-216ENST00000544622 TRAV8-4A0A0B4J246 113 aa7.46□□□□□ -1.22
YBX3-216ENST00000544622 RAB14P61106 215 aa7.46□□□□□ -1.22
YBX3-216ENST00000544622 FAM104BQ5XKR9 115 aa7.46□□□□□ -1.22
YBX3-216ENST00000544622 NRACQ8N912 160 aa7.46□□□□□ -1.22
YBX3-216ENST00000544622 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.45□□□□□ -1.22
YBX3-216ENST00000544622 A0A1B0GW15 77 aa7.45□□□□□ -1.22
YBX3-216ENST00000544622 A0A1B0GXF2 115 aa7.45□□□□□ -1.22
YBX3-216ENST00000544622 TSHBP01222 138 aa7.45□□□□□ -1.22
YBX3-216ENST00000544622 CLPSL2Q6UWE3 100 aa7.45□□□□□ -1.22
YBX3-216ENST00000544622 ST20Q9HBF5 79 aa7.45□□□□□ -1.22
YBX3-216ENST00000544622 TRBV24-1A0A075B6N3 115 aa7.44□□□□□ -1.22
YBX3-216ENST00000544622 LINC00862A6NCI5 91 aa7.44□□□□□ -1.22
YBX3-216ENST00000544622 SMKR1H3BMG3 65 aa7.44□□□□□ -1.22
YBX3-216ENST00000544622 UBE2L6O14933 153 aa7.44□□□□□ -1.22
YBX3-216ENST00000544622 APCSP02743 223 aa7.44□□□□□ -1.22
YBX3-216ENST00000544622 PMCHP20382 165 aa7.44□□□□□ -1.22
YBX3-216ENST00000544622 PNRC1Q12796 327 aaPredicted RBP7.44□□□□□ -1.22
YBX3-216ENST00000544622 MRPL51Q4U2R6 128 aaKnown RBP7.44□□□□□ -1.22
YBX3-216ENST00000544622 VPS13BQ7Z7G8 4022 aa7.43□□□□□ -1.22
YBX3-216ENST00000544622 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.43□□□□□ -1.22
YBX3-216ENST00000544622 IGKV2-29A2NJV5 120 aaPredicted RBP7.43□□□□□ -1.22
YBX3-216ENST00000544622 USP17L23D6RBM5 183 aa7.43□□□□□ -1.22
YBX3-216ENST00000544622 VCYO14598 125 aa7.43□□□□□ -1.22
YBX3-216ENST00000544622 PPP1R17O96001 155 aa7.43□□□□□ -1.22
YBX3-216ENST00000544622 FGF6P10767 208 aa7.43□□□□□ -1.22
YBX3-216ENST00000544622 CAMPP49913 170 aa7.43□□□□□ -1.22
YBX3-216ENST00000544622 C14orf177Q52M58 125 aa7.43□□□□□ -1.22
YBX3-216ENST00000544622 SRRM2Q9UQ35 2752 aaKnown RBP7.42□□□□□ -1.22
YBX3-216ENST00000544622 IGLV10-54A0A075B6I4 117 aa7.42□□□□□ -1.22
YBX3-216ENST00000544622 PPP1R2P9O14990 202 aa7.42□□□□□ -1.22
YBX3-216ENST00000544622 HLA-DQA1P01909 254 aa7.42□□□□□ -1.22
YBX3-216ENST00000544622 PRSS1P07477 247 aa7.42□□□□□ -1.22
YBX3-216ENST00000544622 ZNF25P17030 456 aaPredicted RBP7.42□□□□□ -1.22
YBX3-216ENST00000544622 SUMO2P61956 95 aaKnown RBP7.42□□□□□ -1.22
YBX3-216ENST00000544622 LINC01620Q4KN68 170 aa7.42□□□□□ -1.22
YBX3-216ENST00000544622 MRPL52Q86TS9 123 aaKnown RBP7.42□□□□□ -1.22
YBX3-216ENST00000544622 MYCBP2O75592 4640 aa7.41□□□□□ -1.22
YBX3-216ENST00000544622 RPL32P62910 135 aaKnown RBP7.41□□□□□ -1.22
YBX3-216ENST00000544622 HBBP68871 147 aa7.41□□□□□ -1.22
YBX3-216ENST00000544622 DGAT2L7PQ6IED9 249 aa7.41□□□□□ -1.22
YBX3-216ENST00000544622 MRPL54Q6P161 138 aaKnown RBP7.41□□□□□ -1.22
YBX3-216ENST00000544622 ATP5L2Q7Z4Y8 100 aa7.41□□□□□ -1.22
YBX3-216ENST00000544622 CLRN3Q8NCR9 226 aa7.41□□□□□ -1.22
YBX3-216ENST00000544622 C20orf78Q9BR46 151 aa7.41□□□□□ -1.22
YBX3-216ENST00000544622 TMEM242Q9NWH2 141 aa7.41□□□□□ -1.22
YBX3-216ENST00000544622 EPM2AB3EWF7 344 aa7.4□□□□□ -1.22
YBX3-216ENST00000544622 ADCYAP1P18509 176 aa7.4□□□□□ -1.22
YBX3-216ENST00000544622 HAMPP81172 84 aa7.4□□□□□ -1.22
YBX3-216ENST00000544622 AMMECR1LQ6DCA0 310 aa7.4□□□□□ -1.22
YBX3-216ENST00000544622 UQCC3Q6UW78 93 aa7.4□□□□□ -1.22
YBX3-216ENST00000544622 ANAPC16Q96DE5 110 aa7.4□□□□□ -1.22
YBX3-216ENST00000544622 CDC42SE2Q9NRR3 84 aa7.4□□□□□ -1.22
YBX3-216ENST00000544622 TMEM218A2RU14 115 aa7.39□□□□□ -1.23
YBX3-216ENST00000544622 C7orf77A4D0Y5 90 aa7.39□□□□□ -1.23
YBX3-216ENST00000544622 TNFRSF6BO95407 300 aa7.39□□□□□ -1.23
YBX3-216ENST00000544622 SMR3BP02814 79 aaPredicted RBP7.39□□□□□ -1.23
YBX3-216ENST00000544622 SLPIP03973 132 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms