RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 APCSP02743 223 aa3.76□□□□□ -1.81
CLSTN3-215ENST00000544584 PMCHP20382 165 aa3.76□□□□□ -1.81
CLSTN3-215ENST00000544584 AMTP48728 403 aa3.76□□□□□ -1.81
CLSTN3-215ENST00000544584 NKX2-5P52952 324 aaPredicted RBP3.76□□□□□ -1.81
CLSTN3-215ENST00000544584 SUMO4Q6EEV6 95 aa3.76□□□□□ -1.81
CLSTN3-215ENST00000544584 LINC01551Q86U37 167 aa3.76□□□□□ -1.81
CLSTN3-215ENST00000544584 Q8N814 137 aa3.76□□□□□ -1.81
CLSTN3-215ENST00000544584 MRAP2Q96G30 205 aa3.76□□□□□ -1.81
CLSTN3-215ENST00000544584 KIR2DL4Q99706 377 aa3.76□□□□□ -1.81
CLSTN3-215ENST00000544584 TMEM70Q9BUB7 260 aa3.76□□□□□ -1.81
CLSTN3-215ENST00000544584 ST20Q9HBF5 79 aa3.76□□□□□ -1.81
CLSTN3-215ENST00000544584 AP5S1Q9NUS5 200 aa3.76□□□□□ -1.81
CLSTN3-215ENST00000544584 KIF25-AS1Q9Y6Z4 181 aa3.76□□□□□ -1.81
CLSTN3-215ENST00000544584 HMCN2Q8NDA2 5059 aa3.76□□□□□ -1.81
CLSTN3-215ENST00000544584 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.75□□□□□ -1.81
CLSTN3-215ENST00000544584 LINC00862A6NCI5 91 aa3.75□□□□□ -1.81
CLSTN3-215ENST00000544584 FAM229AH3BQW9 127 aa3.75□□□□□ -1.81
CLSTN3-215ENST00000544584 I3L3M4 83 aa3.75□□□□□ -1.81
CLSTN3-215ENST00000544584 K7EN84 100 aa3.75□□□□□ -1.81
CLSTN3-215ENST00000544584 SRP19P09132 144 aaKnown RBP3.75□□□□□ -1.81
CLSTN3-215ENST00000544584 ZNF25P17030 456 aaPredicted RBP3.75□□□□□ -1.81
CLSTN3-215ENST00000544584 KRTAP10-2P60368 255 aa3.75□□□□□ -1.81
CLSTN3-215ENST00000544584 PNRC1Q12796 327 aaPredicted RBP3.75□□□□□ -1.81
CLSTN3-215ENST00000544584 ADIRFQ15847 76 aa3.75□□□□□ -1.81
CLSTN3-215ENST00000544584 TMEM191AQ9H0A3 160 aa3.75□□□□□ -1.81
CLSTN3-215ENST00000544584 SRRM2Q9UQ35 2752 aaKnown RBP3.75□□□□□ -1.81
CLSTN3-215ENST00000544584 FLG2Q5D862 2391 aaPredicted RBP3.74□□□□□ -1.81
CLSTN3-215ENST00000544584 SDHAF1A6NFY7 115 aa3.74□□□□□ -1.81
CLSTN3-215ENST00000544584 EPM2AB3EWF7 344 aa3.74□□□□□ -1.81
CLSTN3-215ENST00000544584 VCYO14598 125 aa3.74□□□□□ -1.81
CLSTN3-215ENST00000544584 CCL25O15444 150 aa3.74□□□□□ -1.81
CLSTN3-215ENST00000544584 MT-ND4LP03901 98 aa3.74□□□□□ -1.81
CLSTN3-215ENST00000544584 FCER1GP30273 86 aa3.74□□□□□ -1.81
CLSTN3-215ENST00000544584 RBX1P62877 108 aa3.74□□□□□ -1.81
CLSTN3-215ENST00000544584 REG3AQ06141 175 aa3.74□□□□□ -1.81
CLSTN3-215ENST00000544584 GAGE6Q13070 117 aa3.74□□□□□ -1.81
CLSTN3-215ENST00000544584 MPV17L2Q567V2 206 aa3.74□□□□□ -1.81
CLSTN3-215ENST00000544584 DGAT2L7PQ6IED9 249 aa3.74□□□□□ -1.81
CLSTN3-215ENST00000544584 ATRAIDQ6UW56 229 aa3.74□□□□□ -1.81
CLSTN3-215ENST00000544584 LINC00269Q8N2A0 174 aa3.74□□□□□ -1.81
CLSTN3-215ENST00000544584 LRCOL1A6NCL2 159 aa3.73□□□□□ -1.81
CLSTN3-215ENST00000544584 HLA-DQA1P01909 254 aa3.73□□□□□ -1.81
CLSTN3-215ENST00000544584 PPBPP02775 128 aa3.73□□□□□ -1.81
CLSTN3-215ENST00000544584 HBBP68871 147 aa3.73□□□□□ -1.81
CLSTN3-215ENST00000544584 RNASEKQ6P5S7 137 aaKnown RBP3.73□□□□□ -1.81
CLSTN3-215ENST00000544584 ATP5L2Q7Z4Y8 100 aa3.73□□□□□ -1.81
CLSTN3-215ENST00000544584 GATD1Q8NB37 220 aa3.73□□□□□ -1.81
CLSTN3-215ENST00000544584 GTSF1Q8WW33 167 aa3.73□□□□□ -1.81
CLSTN3-215ENST00000544584 BAALCQ8WXS3 180 aa3.73□□□□□ -1.81
CLSTN3-215ENST00000544584 ISOC2Q96AB3 205 aa3.73□□□□□ -1.81
CLSTN3-215ENST00000544584 ANAPC16Q96DE5 110 aa3.73□□□□□ -1.81
CLSTN3-215ENST00000544584 PRR34Q9NV39 138 aa3.73□□□□□ -1.81
CLSTN3-215ENST00000544584 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.72□□□□□ -1.81
CLSTN3-215ENST00000544584 TRAV26-2A0A0B4J265 109 aa3.72□□□□□ -1.81
CLSTN3-215ENST00000544584 TRBV6-5A0A0K0K1A5 114 aa3.72□□□□□ -1.81
CLSTN3-215ENST00000544584 A0A1B0GVG6 124 aa3.72□□□□□ -1.81
CLSTN3-215ENST00000544584 C7orf77A4D0Y5 90 aa3.72□□□□□ -1.81
CLSTN3-215ENST00000544584 PLA2G1BP04054 148 aaKnown RBP3.72□□□□□ -1.81
CLSTN3-215ENST00000544584 RAB5AP20339 215 aa3.72□□□□□ -1.81
CLSTN3-215ENST00000544584 G0S2P27469 103 aa3.72□□□□□ -1.81
CLSTN3-215ENST00000544584 CKS2P33552 79 aa3.72□□□□□ -1.81
CLSTN3-215ENST00000544584 RPL23P62829 140 aaKnown RBP3.72□□□□□ -1.81
CLSTN3-215ENST00000544584 SS18Q15532 418 aa3.72□□□□□ -1.81
CLSTN3-215ENST00000544584 UQCC3Q6UW78 93 aa3.72□□□□□ -1.81
CLSTN3-215ENST00000544584 ENHOQ6UWT2 76 aa3.72□□□□□ -1.81
CLSTN3-215ENST00000544584 NTM-AS1Q6ZSK4 140 aa3.72□□□□□ -1.81
CLSTN3-215ENST00000544584 NUP35Q8NFH5 326 aa3.72□□□□□ -1.81
CLSTN3-215ENST00000544584 OR5A1Q8NGJ0 315 aa3.72□□□□□ -1.81
CLSTN3-215ENST00000544584 DPH3Q96FX2 82 aa3.72□□□□□ -1.81
CLSTN3-215ENST00000544584 C20orf78Q9BR46 151 aa3.72□□□□□ -1.81
CLSTN3-215ENST00000544584 Q9UF83 564 aa3.72□□□□□ -1.81
CLSTN3-215ENST00000544584 TRBV27A0A0K0K1C4 114 aa3.71□□□□□ -1.82
CLSTN3-215ENST00000544584 SMIM27A0A1W2PRY6 76 aa3.71□□□□□ -1.82
CLSTN3-215ENST00000544584 C1orf196B1AJZ1 125 aa3.71□□□□□ -1.82
CLSTN3-215ENST00000544584 USP17L23D6RBM5 183 aa3.71□□□□□ -1.82
CLSTN3-215ENST00000544584 PHOX2AO14813 284 aa3.71□□□□□ -1.82
CLSTN3-215ENST00000544584 RAB4AP20338 218 aa3.71□□□□□ -1.82
CLSTN3-215ENST00000544584 CAMPP49913 170 aa3.71□□□□□ -1.82
CLSTN3-215ENST00000544584 SUMO2P61956 95 aaKnown RBP3.71□□□□□ -1.82
CLSTN3-215ENST00000544584 FAM104BQ5XKR9 115 aa3.71□□□□□ -1.82
CLSTN3-215ENST00000544584 LAMTOR2Q9Y2Q5 125 aa3.71□□□□□ -1.82
CLSTN3-215ENST00000544584 V9GYV3 84 aa3.71□□□□□ -1.82
CLSTN3-215ENST00000544584 DNAH5Q8TE73 4624 aa3.71□□□□□ -1.82
CLSTN3-215ENST00000544584 IGHV3-64A0A075B6Q5 118 aa3.7□□□□□ -1.82
CLSTN3-215ENST00000544584 IGKV3OR2-268A0A0C4DH90 116 aa3.7□□□□□ -1.82
CLSTN3-215ENST00000544584 hDV102S1A0JD36 115 aa3.7□□□□□ -1.82
CLSTN3-215ENST00000544584 LECT2O14960 151 aa3.7□□□□□ -1.82
CLSTN3-215ENST00000544584 APOMO95445 188 aa3.7□□□□□ -1.82
CLSTN3-215ENST00000544584 INAFM2P0DMQ5 153 aa3.7□□□□□ -1.82
CLSTN3-215ENST00000544584 FGF6P10767 208 aa3.7□□□□□ -1.82
CLSTN3-215ENST00000544584 MALP21145 153 aa3.7□□□□□ -1.82
CLSTN3-215ENST00000544584 S100PP25815 95 aa3.7□□□□□ -1.82
CLSTN3-215ENST00000544584 RPL32P62910 135 aaKnown RBP3.7□□□□□ -1.82
CLSTN3-215ENST00000544584 AMN1Q8IY45 258 aa3.7□□□□□ -1.82
CLSTN3-215ENST00000544584 ORMDL3Q8N138 153 aa3.7□□□□□ -1.82
CLSTN3-215ENST00000544584 RPL39LQ96EH5 51 aaKnown RBP3.7□□□□□ -1.82
CLSTN3-215ENST00000544584 LINC00474Q9P2X8 69 aa3.7□□□□□ -1.82
CLSTN3-215ENST00000544584 CSDC2Q9Y534 153 aaKnown RBP3.7□□□□□ -1.82
CLSTN3-215ENST00000544584 IGLV10-54A0A075B6I4 117 aa3.69□□□□□ -1.82
CLSTN3-215ENST00000544584 TRBV24-1A0A075B6N3 115 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms