RNA–Protein interactions for RNA: ENST00000544004.1

AP000439.1-201, humanhuman

TSL 4 BASIC

Gene AP000439.1, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.1-201ENST00000544004 TMEM97Q5BJF2 176 aa6.94□□□□□ -1.3
AP000439.1-201ENST00000544004 ZNF664Q8N3J9 261 aa6.94□□□□□ -1.3
AP000439.1-201ENST00000544004 TRBV25-1A0A075B6N4 114 aa6.93□□□□□ -1.3
AP000439.1-201ENST00000544004 TRAV1-1A0A0B4J248 108 aa6.93□□□□□ -1.3
AP000439.1-201ENST00000544004 TRAV26-2A0A0B4J265 109 aa6.93□□□□□ -1.3
AP000439.1-201ENST00000544004 IFNA1P01562 189 aa6.93□□□□□ -1.3
AP000439.1-201ENST00000544004 SULT1A2P50226 295 aa6.93□□□□□ -1.3
AP000439.1-201ENST00000544004 ZNF56Q15929 161 aa6.93□□□□□ -1.3
AP000439.1-201ENST00000544004 Q6ZNX1 250 aa6.93□□□□□ -1.3
AP000439.1-201ENST00000544004 SLC51BQ86UW2 128 aa6.93□□□□□ -1.3
AP000439.1-201ENST00000544004 C15orf56Q8N910 161 aa6.93□□□□□ -1.3
AP000439.1-201ENST00000544004 C20orf203Q8NBC4 194 aa6.93□□□□□ -1.3
AP000439.1-201ENST00000544004 OR10AG1Q8NH19 301 aa6.93□□□□□ -1.3
AP000439.1-201ENST00000544004 DERL1Q9BUN8 251 aa6.93□□□□□ -1.3
AP000439.1-201ENST00000544004 MLST8Q9BVC4 326 aa6.93□□□□□ -1.3
AP000439.1-201ENST00000544004 PSORS1C2Q9UIG4 136 aa6.93□□□□□ -1.3
AP000439.1-201ENST00000544004 RAB19A4D1S5 217 aa6.92□□□□□ -1.3
AP000439.1-201ENST00000544004 PRR4Q16378 134 aa6.92□□□□□ -1.3
AP000439.1-201ENST00000544004 HIGD2BQ4VC39 106 aa6.92□□□□□ -1.3
AP000439.1-201ENST00000544004 CENPWQ5EE01 88 aa6.92□□□□□ -1.3
AP000439.1-201ENST00000544004 SPANXN1Q5VSR9 72 aa6.92□□□□□ -1.3
AP000439.1-201ENST00000544004 AKAP14Q86UN6 197 aa6.92□□□□□ -1.3
AP000439.1-201ENST00000544004 TPPP3Q9BW30 176 aa6.92□□□□□ -1.3
AP000439.1-201ENST00000544004 MED9Q9NWA0 146 aa6.92□□□□□ -1.3
AP000439.1-201ENST00000544004 F5H697 171 aa6.91□□□□□ -1.3
AP000439.1-201ENST00000544004 GNG4P50150 75 aa6.91□□□□□ -1.3
AP000439.1-201ENST00000544004 CACNG7P62955 275 aa6.91□□□□□ -1.3
AP000439.1-201ENST00000544004 CFAP161Q6P656 301 aa6.91□□□□□ -1.3
AP000439.1-201ENST00000544004 PRR26Q8N8Z3 221 aa6.91□□□□□ -1.3
AP000439.1-201ENST00000544004 C11orf52Q96A22 123 aa6.91□□□□□ -1.3
AP000439.1-201ENST00000544004 GFRA4Q9GZZ7 299 aa6.91□□□□□ -1.3
AP000439.1-201ENST00000544004 IGLV4-60A0A075B6I1 120 aa6.9□□□□□ -1.3
AP000439.1-201ENST00000544004 PDE6DO43924 150 aa6.9□□□□□ -1.3
AP000439.1-201ENST00000544004 CXCL1P09341 107 aa6.9□□□□□ -1.3
AP000439.1-201ENST00000544004 SMIM17P0DL12 118 aa6.9□□□□□ -1.3
AP000439.1-201ENST00000544004 MEF2BQ02080 365 aaPredicted RBP6.9□□□□□ -1.3
AP000439.1-201ENST00000544004 IQCJQ1A5X6 159 aa6.9□□□□□ -1.3
AP000439.1-201ENST00000544004 OR2D3Q8NGH3 330 aa6.9□□□□□ -1.3
AP000439.1-201ENST00000544004 LINC00474Q9P2X8 69 aa6.9□□□□□ -1.3
AP000439.1-201ENST00000544004 IGHV1-24A0A0C4DH33 117 aa6.89□□□□□ -1.31
AP000439.1-201ENST00000544004 SNAI2O43623 268 aa6.89□□□□□ -1.31
AP000439.1-201ENST00000544004 OR5AL1P0C617 328 aa6.89□□□□□ -1.31
AP000439.1-201ENST00000544004 BCL2P10415 239 aa6.89□□□□□ -1.31
AP000439.1-201ENST00000544004 RPS20P60866 119 aaKnown RBP6.89□□□□□ -1.31
AP000439.1-201ENST00000544004 SSBP4Q9BWG4 385 aaPredicted RBP6.89□□□□□ -1.31
AP000439.1-201ENST00000544004 A0A1B0GUV1 79 aa6.88□□□□□ -1.31
AP000439.1-201ENST00000544004 GAGE12HA6NDE8 117 aa6.88□□□□□ -1.31
AP000439.1-201ENST00000544004 C9orf62Q8N4C0 152 aa6.88□□□□□ -1.31
AP000439.1-201ENST00000544004 FER1L6-AS1Q8NA97 138 aa6.88□□□□□ -1.31
AP000439.1-201ENST00000544004 XKRY2A2RUG3 117 aa6.87□□□□□ -1.31
AP000439.1-201ENST00000544004 MGPP08493 103 aa6.87□□□□□ -1.31
AP000439.1-201ENST00000544004 ALKAL2Q6UX46 152 aa6.87□□□□□ -1.31
AP000439.1-201ENST00000544004 AP1S3Q96PC3 154 aa6.87□□□□□ -1.31
AP000439.1-201ENST00000544004 BIN3Q9NQY0 253 aa6.87□□□□□ -1.31
AP000439.1-201ENST00000544004 C19orf71A6NCJ1 209 aa6.86□□□□□ -1.31
AP000439.1-201ENST00000544004 TAGLN2P37802 199 aaKnown RBP6.86□□□□□ -1.31
AP000439.1-201ENST00000544004 BLOC1S1P78537 153 aa6.86□□□□□ -1.31
AP000439.1-201ENST00000544004 TRBV20OR9-2A0A075B6H5 130 aa6.85□□□□□ -1.31
AP000439.1-201ENST00000544004 GVQW2A0A096LPI5 108 aaPredicted RBP6.85□□□□□ -1.31
AP000439.1-201ENST00000544004 IGKV3OR2-268A0A0C4DH90 116 aa6.85□□□□□ -1.31
AP000439.1-201ENST00000544004 CEBPGP53567 150 aa6.85□□□□□ -1.31
AP000439.1-201ENST00000544004 LYZL1Q6UWQ5 148 aa6.85□□□□□ -1.31
AP000439.1-201ENST00000544004 NUDT10Q8NFP7 164 aa6.85□□□□□ -1.31
AP000439.1-201ENST00000544004 SMIM12Q96EX1 92 aa6.85□□□□□ -1.31
AP000439.1-201ENST00000544004 NUDT11Q96G61 164 aa6.85□□□□□ -1.31
AP000439.1-201ENST00000544004 TMEM243Q9BU79 118 aa6.85□□□□□ -1.31
AP000439.1-201ENST00000544004 F2Z2F3 143 aa6.84□□□□□ -1.31
AP000439.1-201ENST00000544004 IGLC6P0CF74 106 aa6.84□□□□□ -1.31
AP000439.1-201ENST00000544004 NKX2-5P52952 324 aaPredicted RBP6.84□□□□□ -1.31
AP000439.1-201ENST00000544004 OCC1Q8TAD7 63 aa6.84□□□□□ -1.31
AP000439.1-201ENST00000544004 PKIGQ9Y2B9 76 aa6.84□□□□□ -1.31
AP000439.1-201ENST00000544004 UBE2L6O14933 153 aa6.83□□□□□ -1.32
AP000439.1-201ENST00000544004 MT-ND6P03923 174 aa6.83□□□□□ -1.32
AP000439.1-201ENST00000544004 NTF3P20783 257 aa6.83□□□□□ -1.32
AP000439.1-201ENST00000544004 TWIST1Q15672 202 aa6.83□□□□□ -1.32
AP000439.1-201ENST00000544004 C1orf137Q5JT78 98 aa6.83□□□□□ -1.32
AP000439.1-201ENST00000544004 RNASE7Q9H1E1 156 aaKnown RBP6.83□□□□□ -1.32
AP000439.1-201ENST00000544004 CRCT1Q9UGL9 99 aa6.83□□□□□ -1.32
AP000439.1-201ENST00000544004 A0A1B0GVG6 124 aa6.82□□□□□ -1.32
AP000439.1-201ENST00000544004 K7EN84 100 aa6.82□□□□□ -1.32
AP000439.1-201ENST00000544004 TRGC1P0CF51 173 aa6.82□□□□□ -1.32
AP000439.1-201ENST00000544004 SUMO4Q6EEV6 95 aa6.82□□□□□ -1.32
AP000439.1-201ENST00000544004 CHCHD10Q8WYQ3 142 aaPredicted RBP6.82□□□□□ -1.32
AP000439.1-201ENST00000544004 DIRC1Q969H9 104 aa6.82□□□□□ -1.32
AP000439.1-201ENST00000544004 LINC00526Q96FQ7 95 aa6.82□□□□□ -1.32
AP000439.1-201ENST00000544004 CARD19Q96LW7 228 aa6.82□□□□□ -1.32
AP000439.1-201ENST00000544004 EIF5A2Q9GZV4 153 aaKnown RBP6.82□□□□□ -1.32
AP000439.1-201ENST00000544004 RPP21Q9H633 154 aaKnown RBP6.82□□□□□ -1.32
AP000439.1-201ENST00000544004 IGLV1-50A0A075B6I6 118 aa6.81□□□□□ -1.32
AP000439.1-201ENST00000544004 A0A1W2PNN7 141 aa6.81□□□□□ -1.32
AP000439.1-201ENST00000544004 M0QY20 66 aa6.81□□□□□ -1.32
AP000439.1-201ENST00000544004 GATCO43716 136 aaKnown RBP6.81□□□□□ -1.32
AP000439.1-201ENST00000544004 PTTG1IPP53801 180 aa6.81□□□□□ -1.32
AP000439.1-201ENST00000544004 TMEM250H0YL14 139 aa6.8□□□□□ -1.32
AP000439.1-201ENST00000544004 AMTP48728 403 aa6.8□□□□□ -1.32
AP000439.1-201ENST00000544004 GAGE2BQ13066 116 aa6.8□□□□□ -1.32
AP000439.1-201ENST00000544004 RASL11AQ6T310 242 aa6.8□□□□□ -1.32
AP000439.1-201ENST00000544004 LCE2DQ5TA82 110 aaPredicted RBP6.79□□□□□ -1.32
AP000439.1-201ENST00000544004 SMIM15Q7Z3B0 74 aa6.79□□□□□ -1.32
AP000439.1-201ENST00000544004 NIT2Q9NQR4 276 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms