RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 DEFB124Q8NES8 71 aa3.66□□□□□ -1.82
LMO3-229ENST00000543721 MRAPQ8TCY5 172 aa3.66□□□□□ -1.82
LMO3-229ENST00000543721 ZNF580Q9UK33 172 aa3.66□□□□□ -1.82
LMO3-229ENST00000543721 UBE2D4Q9Y2X8 147 aa3.66□□□□□ -1.82
LMO3-229ENST00000543721 RANBP2P49792 3224 aaKnown RBP3.66□□□□□ -1.82
LMO3-229ENST00000543721 hADV29S1A0JD25 119 aa3.66□□□□□ -1.82
LMO3-229ENST00000543721 NDUFC2O95298 119 aa3.66□□□□□ -1.82
LMO3-229ENST00000543721 RPL28P46779 137 aaKnown RBP3.66□□□□□ -1.82
LMO3-229ENST00000543721 KLRB1Q12918 225 aa3.66□□□□□ -1.82
LMO3-229ENST00000543721 BEAN1Q3B7T3 259 aa3.66□□□□□ -1.82
LMO3-229ENST00000543721 ATP5EP2Q5VTU8 51 aa3.66□□□□□ -1.82
LMO3-229ENST00000543721 DEFB104AQ8WTQ1 72 aa3.66□□□□□ -1.82
LMO3-229ENST00000543721 DPH3Q96FX2 82 aa3.66□□□□□ -1.82
LMO3-229ENST00000543721 WDR87Q6ZQQ6 2873 aa3.65□□□□□ -1.82
LMO3-229ENST00000543721 PKDREJQ9NTG1 2253 aa3.65□□□□□ -1.82
LMO3-229ENST00000543721 IGLV5-39A0A0G2JS06 123 aa3.65□□□□□ -1.82
LMO3-229ENST00000543721 SZT2Q5T011 3432 aa3.65□□□□□ -1.82
LMO3-229ENST00000543721 FAM19A3Q7Z5A8 133 aa3.65□□□□□ -1.82
LMO3-229ENST00000543721 LINC01560Q8TB33 94 aa3.65□□□□□ -1.82
LMO3-229ENST00000543721 Q9H8V8 135 aa3.65□□□□□ -1.82
LMO3-229ENST00000543721 DOPEY2Q9Y3R5 2298 aa3.65□□□□□ -1.83
LMO3-229ENST00000543721 GHRHP01286 108 aa3.65□□□□□ -1.83
LMO3-229ENST00000543721 CRPP02741 224 aa3.65□□□□□ -1.83
LMO3-229ENST00000543721 ROS1P08922 2347 aa3.65□□□□□ -1.83
LMO3-229ENST00000543721 SYNJ2BPP57105 145 aa3.65□□□□□ -1.83
LMO3-229ENST00000543721 DEFB1P60022 68 aa3.65□□□□□ -1.83
LMO3-229ENST00000543721 C11orf71Q6IPW1 123 aa3.65□□□□□ -1.83
LMO3-229ENST00000543721 Q6ZSV7 163 aa3.65□□□□□ -1.83
LMO3-229ENST00000543721 PRO3102Q9H379 93 aa3.65□□□□□ -1.83
LMO3-229ENST00000543721 IGKV3-7A0A075B6H7 116 aa3.64□□□□□ -1.83
LMO3-229ENST00000543721 BCE1O60756 84 aa3.64□□□□□ -1.83
LMO3-229ENST00000543721 CHCHD7Q9BUK0 85 aa3.64□□□□□ -1.83
LMO3-229ENST00000543721 CDKN2A-AS1Q9UH64 79 aa3.64□□□□□ -1.83
LMO3-229ENST00000543721 IGHV3OR16-10A0A075B7F0 116 aa3.64□□□□□ -1.83
LMO3-229ENST00000543721 TRAV13-1A0A0B4J241 112 aa3.64□□□□□ -1.83
LMO3-229ENST00000543721 IGHG2P01859 326 aa3.64□□□□□ -1.83
LMO3-229ENST00000543721 ZFP36P26651 326 aaKnown RBP3.64□□□□□ -1.83
LMO3-229ENST00000543721 FAM104AQ969W3 186 aa3.64□□□□□ -1.83
LMO3-229ENST00000543721 KLK5Q9Y337 293 aaPredicted RBP3.64□□□□□ -1.83
LMO3-229ENST00000543721 ABCA4P78363 2273 aa3.64□□□□□ -1.83
LMO3-229ENST00000543721 CACNA1BQ00975 2339 aa3.63□□□□□ -1.83
LMO3-229ENST00000543721 USP17L23D6RBM5 183 aa3.63□□□□□ -1.83
LMO3-229ENST00000543721 TRBV12-3P01733 135 aa3.63□□□□□ -1.83
LMO3-229ENST00000543721 CDH23Q9H251 3354 aa3.63□□□□□ -1.83
LMO3-229ENST00000543721 TMEM89A2RUT3 159 aa3.63□□□□□ -1.83
LMO3-229ENST00000543721 K7EQG2 157 aa3.63□□□□□ -1.83
LMO3-229ENST00000543721 OBSCN-AS1Q96MR7 158 aa3.63□□□□□ -1.83
LMO3-229ENST00000543721 UPK3BQ9BT76 320 aa3.63□□□□□ -1.83
LMO3-229ENST00000543721 LAMA1P25391 3075 aa3.63□□□□□ -1.83
LMO3-229ENST00000543721 TRBV10-3A0A0K0K1G6 114 aa3.63□□□□□ -1.83
LMO3-229ENST00000543721 LY6HO94772 140 aa3.63□□□□□ -1.83
LMO3-229ENST00000543721 IGHV3-11P01762 117 aa3.63□□□□□ -1.83
LMO3-229ENST00000543721 IGHV3-53P01767 116 aa3.63□□□□□ -1.83
LMO3-229ENST00000543721 POLEQ07864 2286 aa3.63□□□□□ -1.83
LMO3-229ENST00000543721 RBMY1BA6NDE4 496 aaKnown RBP3.62□□□□□ -1.83
LMO3-229ENST00000543721 RBMY1EA6NEQ0 496 aaKnown RBP3.62□□□□□ -1.83
LMO3-229ENST00000543721 F5H768 121 aa3.62□□□□□ -1.83
LMO3-229ENST00000543721 RBMY1DP0C7P1 496 aaKnown RBP3.62□□□□□ -1.83
LMO3-229ENST00000543721 RBMY1A1P0DJD3 496 aaKnown RBP3.62□□□□□ -1.83
LMO3-229ENST00000543721 RBMY1CP0DJD4 496 aa3.62□□□□□ -1.83
LMO3-229ENST00000543721 SPINK13Q1W4C9 94 aa3.62□□□□□ -1.83
LMO3-229ENST00000543721 ZNF625Q96I27 306 aaPredicted RBP3.62□□□□□ -1.83
LMO3-229ENST00000543721 LINC00467Q9BRT7 94 aa3.62□□□□□ -1.83
LMO3-229ENST00000543721 TRAV12-2A0A075B6T6 113 aa3.62□□□□□ -1.83
LMO3-229ENST00000543721 A8MZ25 164 aa3.62□□□□□ -1.83
LMO3-229ENST00000543721 JMJD7-PLA2G4BH0Y9G9 81 aa3.62□□□□□ -1.83
LMO3-229ENST00000543721 IGLV1-40P01703 118 aa3.62□□□□□ -1.83
LMO3-229ENST00000543721 Q8NA96 180 aa3.62□□□□□ -1.83
LMO3-229ENST00000543721 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.62□□□□□ -1.83
LMO3-229ENST00000543721 IGKV2-29A2NJV5 120 aaPredicted RBP3.62□□□□□ -1.83
LMO3-229ENST00000543721 SMIM1B2RUZ4 78 aa3.62□□□□□ -1.83
LMO3-229ENST00000543721 RNASE13Q5GAN3 156 aaKnown RBP3.62□□□□□ -1.83
LMO3-229ENST00000543721 LINC00242Q5T6M2 205 aa3.61□□□□□ -1.83
LMO3-229ENST00000543721 SOSTDC1Q6X4U4 206 aa3.61□□□□□ -1.83
LMO3-229ENST00000543721 Q8N2B8 174 aa3.61□□□□□ -1.83
LMO3-229ENST00000543721 C22orf24Q9Y442 160 aa3.61□□□□□ -1.83
LMO3-229ENST00000543721 SPTBN1Q01082 2364 aaKnown RBP3.61□□□□□ -1.83
LMO3-229ENST00000543721 IGKV3D-7A0A0C4DH55 119 aa3.61□□□□□ -1.83
LMO3-229ENST00000543721 UCNP55089 124 aa3.61□□□□□ -1.83
LMO3-229ENST00000543721 RBMY1FQ15415 496 aaKnown RBP3.61□□□□□ -1.83
LMO3-229ENST00000543721 A0A1W2PRX2 142 aa3.61□□□□□ -1.83
LMO3-229ENST00000543721 A6NDX4 124 aa3.61□□□□□ -1.83
LMO3-229ENST00000543721 IGKV3-20P01619 116 aa3.61□□□□□ -1.83
LMO3-229ENST00000543721 LMO4P61968 165 aa3.61□□□□□ -1.83
LMO3-229ENST00000543721 FAM218AQ96MZ4 157 aa3.61□□□□□ -1.83
LMO3-229ENST00000543721 SND1-IT1Q9HBX3 110 aa3.61□□□□□ -1.83
LMO3-229ENST00000543721 LINC00846Q9NV44 126 aa3.61□□□□□ -1.83
LMO3-229ENST00000543721 ORMDL1Q9P0S3 153 aa3.61□□□□□ -1.83
LMO3-229ENST00000543721 IGHV3OR16-12A0A075B7B8 117 aa3.6□□□□□ -1.83
LMO3-229ENST00000543721 TRBV10-1A0A0K0K1A3 114 aa3.6□□□□□ -1.83
LMO3-229ENST00000543721 A8MTW9 85 aa3.6□□□□□ -1.83
LMO3-229ENST00000543721 RS1O15537 224 aa3.6□□□□□ -1.83
LMO3-229ENST00000543721 CCKP06307 115 aa3.6□□□□□ -1.83
LMO3-229ENST00000543721 LORP23490 312 aaPredicted RBP3.6□□□□□ -1.83
LMO3-229ENST00000543721 PSMB8P28062 276 aa3.6□□□□□ -1.83
LMO3-229ENST00000543721 C14orf132Q9NPU4 83 aa3.6□□□□□ -1.83
LMO3-229ENST00000543721 SERP1Q9Y6X1 66 aa3.6□□□□□ -1.83
LMO3-229ENST00000543721 NACAE9PAV3 2078 aa3.6□□□□□ -1.83
LMO3-229ENST00000543721 IGHV3-73A0A0B4J1V6 119 aa3.6□□□□□ -1.83
LMO3-229ENST00000543721 K7ENP7 123 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms