RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 IGLV10-54A0A075B6I4 117 aa4.68□□□□□ -1.66
NUP43-206ENST00000543637 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.68□□□□□ -1.66
NUP43-206ENST00000543637 PMCHP20382 165 aa4.68□□□□□ -1.66
NUP43-206ENST00000543637 AMTP48728 403 aa4.68□□□□□ -1.66
NUP43-206ENST00000543637 ALKAL2Q6UX46 152 aa4.68□□□□□ -1.66
NUP43-206ENST00000543637 Q6ZSA8 131 aa4.68□□□□□ -1.66
NUP43-206ENST00000543637 CHAC1Q9BUX1 264 aa4.68□□□□□ -1.66
NUP43-206ENST00000543637 RNASE7Q9H1E1 156 aaKnown RBP4.68□□□□□ -1.66
NUP43-206ENST00000543637 PRR34Q9NV39 138 aa4.68□□□□□ -1.66
NUP43-206ENST00000543637 RYR1P21817 5038 aa4.68□□□□□ -1.66
NUP43-206ENST00000543637 TRBV20OR9-2A0A075B6H5 130 aa4.67□□□□□ -1.66
NUP43-206ENST00000543637 PRSS1P07477 247 aa4.67□□□□□ -1.66
NUP43-206ENST00000543637 CTRLP40313 264 aa4.67□□□□□ -1.66
NUP43-206ENST00000543637 CFAP161Q6P656 301 aa4.67□□□□□ -1.66
NUP43-206ENST00000543637 FAM231DQ6ZW35 169 aa4.67□□□□□ -1.66
NUP43-206ENST00000543637 SCXQ7RTU7 201 aa4.67□□□□□ -1.66
NUP43-206ENST00000543637 C9orf163Q8N9P6 203 aa4.67□□□□□ -1.66
NUP43-206ENST00000543637 BTF3L4Q96K17 158 aa4.67□□□□□ -1.66
NUP43-206ENST00000543637 IGKV3OR2-268A0A0C4DH90 116 aa4.66□□□□□ -1.66
NUP43-206ENST00000543637 hDV102S1A0JD36 115 aa4.66□□□□□ -1.66
NUP43-206ENST00000543637 H7C423 109 aa4.66□□□□□ -1.66
NUP43-206ENST00000543637 K7EN84 100 aa4.66□□□□□ -1.66
NUP43-206ENST00000543637 NCR2O95944 276 aa4.66□□□□□ -1.66
NUP43-206ENST00000543637 APCSP02743 223 aa4.66□□□□□ -1.66
NUP43-206ENST00000543637 RNASEKQ6P5S7 137 aaKnown RBP4.66□□□□□ -1.66
NUP43-206ENST00000543637 C20orf203Q8NBC4 194 aa4.66□□□□□ -1.66
NUP43-206ENST00000543637 CIRBP-AS1Q8TBR5 109 aa4.66□□□□□ -1.66
NUP43-206ENST00000543637 TMEM101Q96IK0 257 aa4.66□□□□□ -1.66
NUP43-206ENST00000543637 FAM210AQ96ND0 272 aa4.66□□□□□ -1.66
NUP43-206ENST00000543637 SMIM7Q9BQ49 75 aa4.66□□□□□ -1.66
NUP43-206ENST00000543637 IGLV4-60A0A075B6I1 120 aa4.65□□□□□ -1.67
NUP43-206ENST00000543637 ZNF727A8MUV8 499 aa4.65□□□□□ -1.67
NUP43-206ENST00000543637 I3L3M4 83 aa4.65□□□□□ -1.67
NUP43-206ENST00000543637 NDUFS6O75380 124 aaKnown RBP4.65□□□□□ -1.67
NUP43-206ENST00000543637 SMAGPQ0VAQ4 97 aa4.65□□□□□ -1.67
NUP43-206ENST00000543637 GATD1Q8NB37 220 aa4.65□□□□□ -1.67
NUP43-206ENST00000543637 LYPD6BQ8NI32 183 aa4.65□□□□□ -1.67
NUP43-206ENST00000543637 CNFNQ9BYD5 112 aa4.65□□□□□ -1.67
NUP43-206ENST00000543637 ST20Q9HBF5 79 aa4.65□□□□□ -1.67
NUP43-206ENST00000543637 IGHV3-64A0A075B6Q5 118 aa4.64□□□□□ -1.67
NUP43-206ENST00000543637 TRAV26-2A0A0B4J265 109 aa4.64□□□□□ -1.67
NUP43-206ENST00000543637 A0A1B0GUT8 65 aa4.64□□□□□ -1.67
NUP43-206ENST00000543637 FAM231BA6NCW3 169 aa4.64□□□□□ -1.67
NUP43-206ENST00000543637 SDHAF1A6NFY7 115 aa4.64□□□□□ -1.67
NUP43-206ENST00000543637 FOXA3P55318 350 aaPredicted RBP4.64□□□□□ -1.67
NUP43-206ENST00000543637 RPL37AP61513 92 aaKnown RBP4.64□□□□□ -1.67
NUP43-206ENST00000543637 RIGQ13278 110 aa4.64□□□□□ -1.67
NUP43-206ENST00000543637 CT83Q5H943 113 aa4.64□□□□□ -1.67
NUP43-206ENST00000543637 GTSF1Q8WW33 167 aa4.64□□□□□ -1.67
NUP43-206ENST00000543637 GFRA4Q9GZZ7 299 aa4.64□□□□□ -1.67
NUP43-206ENST00000543637 OSTCQ9NRP0 149 aa4.64□□□□□ -1.67
NUP43-206ENST00000543637 GAGE12HA6NDE8 117 aa4.63□□□□□ -1.67
NUP43-206ENST00000543637 HIGD1CA8MV81 97 aa4.63□□□□□ -1.67
NUP43-206ENST00000543637 PPP1R17O96001 155 aa4.63□□□□□ -1.67
NUP43-206ENST00000543637 ZNF25P17030 456 aaPredicted RBP4.63□□□□□ -1.67
NUP43-206ENST00000543637 SS18Q15532 418 aa4.63□□□□□ -1.67
NUP43-206ENST00000543637 TMEM241Q24JQ0 296 aa4.63□□□□□ -1.67
NUP43-206ENST00000543637 FAM74A3Q4VXF1 159 aa4.63□□□□□ -1.67
NUP43-206ENST00000543637 KRTAP26-1Q6PEX3 210 aa4.63□□□□□ -1.67
NUP43-206ENST00000543637 TSKUQ8WUA8 353 aa4.63□□□□□ -1.67
NUP43-206ENST00000543637 RPL39LQ96EH5 51 aaKnown RBP4.63□□□□□ -1.67
NUP43-206ENST00000543637 TMEM191AQ9H0A3 160 aa4.63□□□□□ -1.67
NUP43-206ENST00000543637 HSPG2P98160 4391 aa4.62□□□□□ -1.67
NUP43-206ENST00000543637 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.62□□□□□ -1.67
NUP43-206ENST00000543637 TRBV6-5A0A0K0K1A5 114 aa4.62□□□□□ -1.67
NUP43-206ENST00000543637 IGKV2-29A2NJV5 120 aaPredicted RBP4.62□□□□□ -1.67
NUP43-206ENST00000543637 KRTAP29-1A8MX34 341 aaPredicted RBP4.62□□□□□ -1.67
NUP43-206ENST00000543637 VCYO14598 125 aa4.62□□□□□ -1.67
NUP43-206ENST00000543637 OXTP01178 125 aa4.62□□□□□ -1.67
NUP43-206ENST00000543637 SRP19P09132 144 aaKnown RBP4.62□□□□□ -1.67
NUP43-206ENST00000543637 FGF6P10767 208 aa4.62□□□□□ -1.67
NUP43-206ENST00000543637 RPS10P46783 165 aaKnown RBP4.62□□□□□ -1.67
NUP43-206ENST00000543637 CNBPP62633 177 aaKnown RBP4.62□□□□□ -1.67
NUP43-206ENST00000543637 PEA15Q15121 130 aa4.62□□□□□ -1.67
NUP43-206ENST00000543637 XP32Q5T750 250 aa4.62□□□□□ -1.67
NUP43-206ENST00000543637 SDIM1Q6ZPB5 146 aa4.62□□□□□ -1.67
NUP43-206ENST00000543637 LINC01551Q86U37 167 aa4.62□□□□□ -1.67
NUP43-206ENST00000543637 OR5A1Q8NGJ0 315 aa4.62□□□□□ -1.67
NUP43-206ENST00000543637 CHCHD10Q8WYQ3 142 aaPredicted RBP4.62□□□□□ -1.67
NUP43-206ENST00000543637 TMEM18Q96B42 140 aa4.62□□□□□ -1.67
NUP43-206ENST00000543637 MRAP2Q96G30 205 aa4.62□□□□□ -1.67
NUP43-206ENST00000543637 RNF185Q96GF1 192 aa4.62□□□□□ -1.67
NUP43-206ENST00000543637 PKIGQ9Y2B9 76 aa4.62□□□□□ -1.67
NUP43-206ENST00000543637 RAB4AP20338 218 aa4.61□□□□□ -1.67
NUP43-206ENST00000543637 FCER1GP30273 86 aa4.61□□□□□ -1.67
NUP43-206ENST00000543637 KIR2DL4Q99706 377 aa4.61□□□□□ -1.67
NUP43-206ENST00000543637 NAT8BQ9UHF3 227 aa4.61□□□□□ -1.67
NUP43-206ENST00000543637 LRP1BQ9NZR2 4599 aa4.61□□□□□ -1.67
NUP43-206ENST00000543637 ABCA13Q86UQ4 5058 aa4.6□□□□□ -1.67
NUP43-206ENST00000543637 LINC00959A0A1B0GUT2 108 aa4.6□□□□□ -1.67
NUP43-206ENST00000543637 ZNF561-AS1K7EIQ3 104 aa4.6□□□□□ -1.67
NUP43-206ENST00000543637 PPP1R2P9O14990 202 aa4.6□□□□□ -1.67
NUP43-206ENST00000543637 ADIRFQ15847 76 aa4.6□□□□□ -1.67
NUP43-206ENST00000543637 SERTAD4-AS1Q5TG53 156 aa4.6□□□□□ -1.67
NUP43-206ENST00000543637 AMN1Q8IY45 258 aa4.6□□□□□ -1.67
NUP43-206ENST00000543637 C7orf33Q8WU49 177 aa4.6□□□□□ -1.67
NUP43-206ENST00000543637 SMDT1Q9H4I9 107 aa4.6□□□□□ -1.67
NUP43-206ENST00000543637 NAT8Q9UHE5 227 aa4.6□□□□□ -1.67
NUP43-206ENST00000543637 IGHV1-58A0A0C4DH39 117 aa4.59□□□□□ -1.67
NUP43-206ENST00000543637 A0A1B0GW15 77 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms