RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	TRBV7-3	A0A075B6L6	115 aa		4.62	□□□□□ -1.67
CIT-213	ENST00000543324	TRBV25-1	A0A075B6N4	114 aa		4.62	□□□□□ -1.67
CIT-213	ENST00000543324	IGHV3-49	A0A0A0MS15	119 aa		4.62	□□□□□ -1.67
CIT-213	ENST00000543324	IGKC	P01834	107 aa		4.62	□□□□□ -1.67
CIT-213	ENST00000543324	GCSH	P23434	173 aa		4.62	□□□□□ -1.67
CIT-213	ENST00000543324	FCER1G	P30273	86 aa		4.62	□□□□□ -1.67
CIT-213	ENST00000543324	NMU	P48645	174 aa		4.62	□□□□□ -1.67
CIT-213	ENST00000543324	CMC4	P56277	68 aa	Predicted RBP	4.62	□□□□□ -1.67
CIT-213	ENST00000543324	PDE6H	Q13956	83 aa		4.62	□□□□□ -1.67
CIT-213	ENST00000543324	WFDC2	Q14508	124 aa		4.62	□□□□□ -1.67
CIT-213	ENST00000543324	TWIST1	Q15672	202 aa		4.62	□□□□□ -1.67
CIT-213	ENST00000543324	RRN3P1	Q2M238	152 aa		4.62	□□□□□ -1.67
CIT-213	ENST00000543324	GAGE13	Q4V321	117 aa		4.62	□□□□□ -1.67
CIT-213	ENST00000543324	PRNT	Q86SH4	94 aa		4.62	□□□□□ -1.67
CIT-213	ENST00000543324	TRPT1	Q86TN4	253 aa	Known RBP	4.62	□□□□□ -1.67
CIT-213	ENST00000543324		Q8NAQ8	132 aa		4.62	□□□□□ -1.67
CIT-213	ENST00000543324	NAA38	Q9BRA0	125 aa	Known RBP	4.62	□□□□□ -1.67
CIT-213	ENST00000543324	C1QTNF4	Q9BXJ3	329 aa		4.62	□□□□□ -1.67
CIT-213	ENST00000543324	CNFN	Q9BYD5	112 aa		4.62	□□□□□ -1.67
CIT-213	ENST00000543324	GEMIN7	Q9H840	131 aa	Known RBP	4.62	□□□□□ -1.67
CIT-213	ENST00000543324	NXT2	Q9NPJ8	142 aa	Known RBP	4.62	□□□□□ -1.67
CIT-213	ENST00000543324	IGHV3OR16-13	A0A075B7E8	117 aa		4.61	□□□□□ -1.67
CIT-213	ENST00000543324	IGHV3-74	A0A0B4J1X5	117 aa		4.61	□□□□□ -1.67
CIT-213	ENST00000543324		H3BRN7	92 aa		4.61	□□□□□ -1.67
CIT-213	ENST00000543324		M0QXV9	152 aa		4.61	□□□□□ -1.67
CIT-213	ENST00000543324	DPM2	O94777	84 aa		4.61	□□□□□ -1.67
CIT-213	ENST00000543324	IGLC6	P0CF74	106 aa		4.61	□□□□□ -1.67
CIT-213	ENST00000543324	RPL35A	P18077	110 aa	Known RBP	4.61	□□□□□ -1.67
CIT-213	ENST00000543324	ORM2	P19652	201 aa		4.61	□□□□□ -1.67
CIT-213	ENST00000543324	CRIP1	P50238	77 aa		4.61	□□□□□ -1.67
CIT-213	ENST00000543324	FOXI1	Q12951	378 aa		4.61	□□□□□ -1.67
CIT-213	ENST00000543324	C12orf74	Q32Q52	190 aa		4.61	□□□□□ -1.67
CIT-213	ENST00000543324	SIGLEC15	Q6ZMC9	328 aa		4.61	□□□□□ -1.67
CIT-213	ENST00000543324	GOLT1A	Q6ZVE7	132 aa		4.61	□□□□□ -1.67
CIT-213	ENST00000543324	CSNK1G2-AS1	Q8NCQ2	148 aa		4.61	□□□□□ -1.67
CIT-213	ENST00000543324	SGK494	Q96LW2	274 aa		4.61	□□□□□ -1.67
CIT-213	ENST00000543324	CDIP1	Q9H305	208 aa		4.61	□□□□□ -1.67
CIT-213	ENST00000543324	MAP1LC3A	Q9H492	121 aa		4.61	□□□□□ -1.67
CIT-213	ENST00000543324	SPANXA1	Q9NS26	97 aa		4.61	□□□□□ -1.67
CIT-213	ENST00000543324	NHP2	Q9NX24	153 aa	Known RBP	4.61	□□□□□ -1.67
CIT-213	ENST00000543324	DKK2	Q9UBU2	259 aa		4.61	□□□□□ -1.67
CIT-213	ENST00000543324	ERG28	Q9UKR5	140 aa		4.61	□□□□□ -1.67
CIT-213	ENST00000543324	TRBV19	A0A075B6N1	114 aa		4.6	□□□□□ -1.67
CIT-213	ENST00000543324	IGKV2D-26	A0A0A0MRZ7	120 aa		4.6	□□□□□ -1.67
CIT-213	ENST00000543324		M0R2N4	97 aa		4.6	□□□□□ -1.67
CIT-213	ENST00000543324	MRPS12	O15235	138 aa	Known RBP	4.6	□□□□□ -1.67
CIT-213	ENST00000543324	NPY	P01303	97 aa		4.6	□□□□□ -1.67
CIT-213	ENST00000543324	TCTA	P57738	103 aa		4.6	□□□□□ -1.67
CIT-213	ENST00000543324	DEFB131A	P59861	70 aa		4.6	□□□□□ -1.67
CIT-213	ENST00000543324	LYRM7	Q5U5X0	104 aa		4.6	□□□□□ -1.67
CIT-213	ENST00000543324	CFAP126	Q5VTH2	177 aa		4.6	□□□□□ -1.67
CIT-213	ENST00000543324	CFAP161	Q6P656	301 aa		4.6	□□□□□ -1.67
CIT-213	ENST00000543324	LYZL1	Q6UWQ5	148 aa		4.6	□□□□□ -1.67
CIT-213	ENST00000543324	S100A7A	Q86SG5	101 aa		4.6	□□□□□ -1.67
CIT-213	ENST00000543324	AMN1	Q8IY45	258 aa		4.6	□□□□□ -1.67
CIT-213	ENST00000543324	METTL26	Q96S19	204 aa		4.6	□□□□□ -1.67
CIT-213	ENST00000543324	SHANK2-AS3	Q9BTD1	123 aa		4.6	□□□□□ -1.67
CIT-213	ENST00000543324		X6R8D5	127 aa		4.6	□□□□□ -1.67
CIT-213	ENST00000543324	TRAV8-1	A0A0A6YYK1	113 aa		4.59	□□□□□ -1.67
CIT-213	ENST00000543324	TRAV12-1	A0A0B4J245	112 aa		4.59	□□□□□ -1.67
CIT-213	ENST00000543324	IGHV3-66	A0A0C4DH42	116 aa		4.59	□□□□□ -1.67
CIT-213	ENST00000543324	LOC389332	A0A1B0GUA5	103 aa		4.59	□□□□□ -1.67
CIT-213	ENST00000543324		K7ERJ3	54 aa		4.59	□□□□□ -1.67
CIT-213	ENST00000543324	SOCS3	O14543	225 aa		4.59	□□□□□ -1.67
CIT-213	ENST00000543324	BUB3	O43684	328 aa		4.59	□□□□□ -1.67
CIT-213	ENST00000543324	APOM	O95445	188 aa		4.59	□□□□□ -1.67
CIT-213	ENST00000543324	CKS2	P33552	79 aa		4.59	□□□□□ -1.67
CIT-213	ENST00000543324	TNP2	Q05952	138 aa		4.59	□□□□□ -1.67
CIT-213	ENST00000543324	ETDB	Q3ZM63	59 aa		4.59	□□□□□ -1.67
CIT-213	ENST00000543324		Q8N8P6	123 aa		4.59	□□□□□ -1.67
CIT-213	ENST00000543324	RNF185	Q96GF1	192 aa		4.59	□□□□□ -1.67
CIT-213	ENST00000543324	LINC01600	Q96MT4	127 aa		4.59	□□□□□ -1.67
CIT-213	ENST00000543324	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.59	□□□□□ -1.67
CIT-213	ENST00000543324	NACA	E9PAV3	2078 aa		4.58	□□□□□ -1.68
CIT-213	ENST00000543324	IGKV3-7	A0A075B6H7	116 aa		4.58	□□□□□ -1.68
CIT-213	ENST00000543324	IGLV2-18	A0A075B6J9	118 aa		4.58	□□□□□ -1.68
CIT-213	ENST00000543324		A0A087WX48	190 aa		4.58	□□□□□ -1.68
CIT-213	ENST00000543324		A8MTW9	85 aa		4.58	□□□□□ -1.68
CIT-213	ENST00000543324	SH2D1A	O60880	128 aa		4.58	□□□□□ -1.68
CIT-213	ENST00000543324	GAS8-AS1	O95177	125 aa		4.58	□□□□□ -1.68
CIT-213	ENST00000543324	SPINK8	P0C7L1	97 aa		4.58	□□□□□ -1.68
CIT-213	ENST00000543324	ZNF688	P0C7X2	276 aa		4.58	□□□□□ -1.68
CIT-213	ENST00000543324	PLN	P26678	52 aa		4.58	□□□□□ -1.68
CIT-213	ENST00000543324	ZC2HC1B	Q5TFG8	222 aa		4.58	□□□□□ -1.68
CIT-213	ENST00000543324	MORN3	Q6PF18	240 aa	Predicted RBP	4.58	□□□□□ -1.68
CIT-213	ENST00000543324		Q6ZUT4	128 aa		4.58	□□□□□ -1.68
CIT-213	ENST00000543324	SH2D6	Q7Z4S9	175 aa		4.58	□□□□□ -1.68
CIT-213	ENST00000543324	EXOC3-AS1	Q8N2X6	119 aa		4.58	□□□□□ -1.68
CIT-213	ENST00000543324	PPDPFL	Q8WWR9	84 aa		4.58	□□□□□ -1.68
CIT-213	ENST00000543324	C17orf77	Q96MU5	243 aa		4.58	□□□□□ -1.68
CIT-213	ENST00000543324	IGHV4-28	A0A0C4DH34	117 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324	KNCN	A6PVL3	124 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324	TMEM262	E9PQX1	116 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324		H3BMM0	161 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324		K7EMI3	77 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324	SCGB2A1	O75556	95 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324	IL4	P05112	153 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324	MIF	P14174	115 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324	LEP	P41159	167 aa		4.57	□□□□□ -1.68
CIT-213	ENST00000543324	UBE2D1	P51668	147 aa		4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms