RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 PANO1I0J062 215 aa11.91□□□□□ -0.5
LTBR-211ENST00000543190 IFNA1P01562 189 aa11.91□□□□□ -0.5
LTBR-211ENST00000543190 SSTP61278 116 aa11.91□□□□□ -0.5
LTBR-211ENST00000543190 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.9□□□□□ -0.5
LTBR-211ENST00000543190 BCL2P10415 239 aa11.9□□□□□ -0.5
LTBR-211ENST00000543190 HNRNPA3P51991 378 aaKnown RBP11.9□□□□□ -0.5
LTBR-211ENST00000543190 Q6ZRU5 148 aa11.9□□□□□ -0.5
LTBR-211ENST00000543190 TPPP3Q9BW30 176 aa11.9□□□□□ -0.5
LTBR-211ENST00000543190 GFRA4Q9GZZ7 299 aa11.9□□□□□ -0.5
LTBR-211ENST00000543190 SLPIP03973 132 aa11.89□□□□□ -0.51
LTBR-211ENST00000543190 IGLV10-54A0A075B6I4 117 aa11.88□□□□□ -0.51
LTBR-211ENST00000543190 IGHV3-64A0A075B6Q5 118 aa11.88□□□□□ -0.51
LTBR-211ENST00000543190 H7C423 109 aa11.88□□□□□ -0.51
LTBR-211ENST00000543190 NCR2O95944 276 aa11.88□□□□□ -0.51
LTBR-211ENST00000543190 COTL1Q14019 142 aa11.88□□□□□ -0.51
LTBR-211ENST00000543190 NUDT10Q8NFP7 164 aa11.88□□□□□ -0.51
LTBR-211ENST00000543190 NUDT11Q96G61 164 aa11.88□□□□□ -0.51
LTBR-211ENST00000543190 FAM210AQ96ND0 272 aa11.88□□□□□ -0.51
LTBR-211ENST00000543190 MED9Q9NWA0 146 aa11.88□□□□□ -0.51
LTBR-211ENST00000543190 hDV102S1A0JD36 115 aa11.87□□□□□ -0.51
LTBR-211ENST00000543190 TCTE3Q8IZS6 198 aa11.87□□□□□ -0.51
LTBR-211ENST00000543190 AP5S1Q9NUS5 200 aa11.87□□□□□ -0.51
LTBR-211ENST00000543190 TEX261Q6UWH6 196 aa11.86□□□□□ -0.51
LTBR-211ENST00000543190 SPACA4Q8TDM5 124 aa11.86□□□□□ -0.51
LTBR-211ENST00000543190 PLAC8Q9NZF1 115 aa11.86□□□□□ -0.51
LTBR-211ENST00000543190 UBE2L6O14933 153 aa11.85□□□□□ -0.51
LTBR-211ENST00000543190 MT1HL1P0DM35 61 aa11.85□□□□□ -0.51
LTBR-211ENST00000543190 AMTP48728 403 aa11.85□□□□□ -0.51
LTBR-211ENST00000543190 CFAP161Q6P656 301 aa11.85□□□□□ -0.51
LTBR-211ENST00000543190 SLC51BQ86UW2 128 aa11.85□□□□□ -0.51
LTBR-211ENST00000543190 C15orf56Q8N910 161 aa11.85□□□□□ -0.51
LTBR-211ENST00000543190 GATD1Q8NB37 220 aa11.85□□□□□ -0.51
LTBR-211ENST00000543190 RPP21Q9H633 154 aaKnown RBP11.84□□□□□ -0.51
LTBR-211ENST00000543190 A0A087WYN8 130 aa11.83□□□□□ -0.52
LTBR-211ENST00000543190 PLA2G2DQ9UNK4 145 aa11.83□□□□□ -0.52
LTBR-211ENST00000543190 TMEM250H0YL14 139 aa11.82□□□□□ -0.52
LTBR-211ENST00000543190 K7EN84 100 aa11.82□□□□□ -0.52
LTBR-211ENST00000543190 FOXA3P55318 350 aaPredicted RBP11.82□□□□□ -0.52
LTBR-211ENST00000543190 TWIST1Q15672 202 aa11.82□□□□□ -0.52
LTBR-211ENST00000543190 OCC1Q8TAD7 63 aa11.82□□□□□ -0.52
LTBR-211ENST00000543190 GVQW2A0A096LPI5 108 aaPredicted RBP11.81□□□□□ -0.52
LTBR-211ENST00000543190 TRBV6-5A0A0K0K1A5 114 aa11.81□□□□□ -0.52
LTBR-211ENST00000543190 ZNF25P17030 456 aaPredicted RBP11.81□□□□□ -0.52
LTBR-211ENST00000543190 FAM231DQ6ZW35 169 aa11.81□□□□□ -0.52
LTBR-211ENST00000543190 GTSF1Q8WW33 167 aa11.81□□□□□ -0.52
LTBR-211ENST00000543190 NDUFS6O75380 124 aaKnown RBP11.8□□□□□ -0.52
LTBR-211ENST00000543190 RPS10P46783 165 aaKnown RBP11.8□□□□□ -0.52
LTBR-211ENST00000543190 CT83Q5H943 113 aa11.8□□□□□ -0.52
LTBR-211ENST00000543190 LYPD6BQ8NI32 183 aa11.8□□□□□ -0.52
LTBR-211ENST00000543190 Q6ZNX1 250 aa11.79□□□□□ -0.52
LTBR-211ENST00000543190 RNASE7Q9H1E1 156 aaKnown RBP11.79□□□□□ -0.52
LTBR-211ENST00000543190 SDHAF1A6NFY7 115 aa11.78□□□□□ -0.52
LTBR-211ENST00000543190 SMIM15Q7Z3B0 74 aa11.78□□□□□ -0.52
LTBR-211ENST00000543190 CHCHD10Q8WYQ3 142 aaPredicted RBP11.78□□□□□ -0.52
LTBR-211ENST00000543190 TRAV26-2A0A0B4J265 109 aa11.77□□□□□ -0.53
LTBR-211ENST00000543190 GAGE12HA6NDE8 117 aa11.77□□□□□ -0.53
LTBR-211ENST00000543190 A8MWL6 223 aa11.77□□□□□ -0.53
LTBR-211ENST00000543190 FAM231BA6NCW3 169 aa11.76□□□□□ -0.53
LTBR-211ENST00000543190 APCSP02743 223 aa11.76□□□□□ -0.53
LTBR-211ENST00000543190 CHTF8P0CG12 524 aa11.76□□□□□ -0.53
LTBR-211ENST00000543190 FGF6P10767 208 aa11.76□□□□□ -0.53
LTBR-211ENST00000543190 AMMECR1LQ6DCA0 310 aa11.76□□□□□ -0.53
LTBR-211ENST00000543190 OR5A1Q8NGJ0 315 aa11.76□□□□□ -0.53
LTBR-211ENST00000543190 RPL39LQ96EH5 51 aaKnown RBP11.76□□□□□ -0.53
LTBR-211ENST00000543190 PKIGQ9Y2B9 76 aa11.76□□□□□ -0.53
LTBR-211ENST00000543190 I3L3M4 83 aa11.75□□□□□ -0.53
LTBR-211ENST00000543190 ESDP10768 282 aa11.75□□□□□ -0.53
LTBR-211ENST00000543190 FOXI1Q12951 378 aa11.75□□□□□ -0.53
LTBR-211ENST00000543190 COX6A2Q02221 97 aa11.74□□□□□ -0.53
LTBR-211ENST00000543190 MRPL52Q86TS9 123 aaKnown RBP11.74□□□□□ -0.53
LTBR-211ENST00000543190 C7orf33Q8WU49 177 aa11.74□□□□□ -0.53
LTBR-211ENST00000543190 LINC00474Q9P2X8 69 aa11.74□□□□□ -0.53
LTBR-211ENST00000543190 BLOC1S1P78537 153 aa11.73□□□□□ -0.53
LTBR-211ENST00000543190 PRSS3P2Q8NHM4 247 aa11.73□□□□□ -0.53
LTBR-211ENST00000543190 DPH3Q96FX2 82 aa11.73□□□□□ -0.53
LTBR-211ENST00000543190 TNXBP22105 4242 aa11.72□□□□□ -0.53
LTBR-211ENST00000543190 UBR4Q5T4S7 5183 aa11.72□□□□□ -0.53
LTBR-211ENST00000543190 TRBV27A0A0K0K1C4 114 aa11.72□□□□□ -0.53
LTBR-211ENST00000543190 GATCO43716 136 aaKnown RBP11.72□□□□□ -0.53
LTBR-211ENST00000543190 POLR2KP53803 58 aaKnown RBP11.72□□□□□ -0.53
LTBR-211ENST00000543190 TMEM191AQ9H0A3 160 aa11.72□□□□□ -0.53
LTBR-211ENST00000543190 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.71□□□□□ -0.53
LTBR-211ENST00000543190 IGKV2-29A2NJV5 120 aaPredicted RBP11.71□□□□□ -0.53
LTBR-211ENST00000543190 PHOX2AO14813 284 aa11.71□□□□□ -0.53
LTBR-211ENST00000543190 RNASEKQ6P5S7 137 aaKnown RBP11.71□□□□□ -0.53
LTBR-211ENST00000543190 LINC00959A0A1B0GUT2 108 aa11.7□□□□□ -0.54
LTBR-211ENST00000543190 TSHBP01222 138 aa11.7□□□□□ -0.54
LTBR-211ENST00000543190 BTF3L4Q96K17 158 aa11.7□□□□□ -0.54
LTBR-211ENST00000543190 IGHV1-58A0A0C4DH39 117 aa11.69□□□□□ -0.54
LTBR-211ENST00000543190 A0A1B0GUT8 65 aa11.69□□□□□ -0.54
LTBR-211ENST00000543190 CCL25O15444 150 aa11.69□□□□□ -0.54
LTBR-211ENST00000543190 PMCHP20382 165 aa11.69□□□□□ -0.54
LTBR-211ENST00000543190 PRR3P79522 188 aaKnown RBP11.69□□□□□ -0.54
LTBR-211ENST00000543190 HIGD2BQ4VC39 106 aa11.69□□□□□ -0.54
LTBR-211ENST00000543190 TSKUQ8WUA8 353 aa11.69□□□□□ -0.54
LTBR-211ENST00000543190 LINC01600Q96MT4 127 aa11.69□□□□□ -0.54
LTBR-211ENST00000543190 CDC42SE2Q9NRR3 84 aa11.69□□□□□ -0.54
LTBR-211ENST00000543190 CSDC2Q9Y534 153 aaKnown RBP11.69□□□□□ -0.54
LTBR-211ENST00000543190 IGKV3OR2-268A0A0C4DH90 116 aa11.68□□□□□ -0.54
LTBR-211ENST00000543190 CD164L2Q6UWJ8 174 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms