RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 CNFNQ9BYD5 112 aa7.73□□□□□ -1.17
PTPN6-220ENST00000543115 RNASE7Q9H1E1 156 aaKnown RBP7.73□□□□□ -1.17
PTPN6-220ENST00000543115 LRP1Q07954 4544 aaKnown RBP7.73□□□□□ -1.17
PTPN6-220ENST00000543115 TRAV8-4A0A0B4J246 113 aa7.72□□□□□ -1.17
PTPN6-220ENST00000543115 TRAV26-2A0A0B4J265 109 aa7.72□□□□□ -1.17
PTPN6-220ENST00000543115 SLPIP03973 132 aa7.72□□□□□ -1.17
PTPN6-220ENST00000543115 TWIST1Q15672 202 aa7.72□□□□□ -1.17
PTPN6-220ENST00000543115 WDR73Q6P4I2 378 aa7.72□□□□□ -1.17
PTPN6-220ENST00000543115 SLC51BQ86UW2 128 aa7.72□□□□□ -1.17
PTPN6-220ENST00000543115 GATD1Q8NB37 220 aa7.72□□□□□ -1.17
PTPN6-220ENST00000543115 CLRN3Q8NCR9 226 aa7.72□□□□□ -1.17
PTPN6-220ENST00000543115 OCC1Q8TAD7 63 aa7.72□□□□□ -1.17
PTPN6-220ENST00000543115 RPP21Q9H633 154 aaKnown RBP7.72□□□□□ -1.17
PTPN6-220ENST00000543115 BIN3Q9NQY0 253 aa7.72□□□□□ -1.17
PTPN6-220ENST00000543115 hDV102S1A0JD36 115 aa7.71□□□□□ -1.18
PTPN6-220ENST00000543115 OXTP01178 125 aa7.71□□□□□ -1.18
PTPN6-220ENST00000543115 AMTP48728 403 aa7.71□□□□□ -1.18
PTPN6-220ENST00000543115 CNBPP62633 177 aaKnown RBP7.71□□□□□ -1.18
PTPN6-220ENST00000543115 COTL1Q14019 142 aa7.71□□□□□ -1.18
PTPN6-220ENST00000543115 GTSF1Q8WW33 167 aa7.71□□□□□ -1.18
PTPN6-220ENST00000543115 UBE2L6O14933 153 aa7.7□□□□□ -1.18
PTPN6-220ENST00000543115 FOXA3P55318 350 aaPredicted RBP7.7□□□□□ -1.18
PTPN6-220ENST00000543115 RPL39LQ96EH5 51 aaKnown RBP7.7□□□□□ -1.18
PTPN6-220ENST00000543115 CHTF8P0CG12 524 aa7.69□□□□□ -1.18
PTPN6-220ENST00000543115 TAGLN2P37802 199 aaKnown RBP7.69□□□□□ -1.18
PTPN6-220ENST00000543115 CIRBPQ14011 172 aaKnown RBP7.69□□□□□ -1.18
PTPN6-220ENST00000543115 Q6ZNX1 250 aa7.69□□□□□ -1.18
PTPN6-220ENST00000543115 PKHD1L1Q86WI1 4243 aa7.69□□□□□ -1.18
PTPN6-220ENST00000543115 FAT3Q8TDW7 4589 aa7.68□□□□□ -1.18
PTPN6-220ENST00000543115 IGKV3OR2-268A0A0C4DH90 116 aa7.68□□□□□ -1.18
PTPN6-220ENST00000543115 C15orf56Q8N910 161 aa7.68□□□□□ -1.18
PTPN6-220ENST00000543115 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.67□□□□□ -1.18
PTPN6-220ENST00000543115 IGKV2-29A2NJV5 120 aaPredicted RBP7.67□□□□□ -1.18
PTPN6-220ENST00000543115 GAGE12HA6NDE8 117 aa7.67□□□□□ -1.18
PTPN6-220ENST00000543115 AP5S1Q9NUS5 200 aa7.67□□□□□ -1.18
PTPN6-220ENST00000543115 IGHV3-64A0A075B6Q5 118 aa7.66□□□□□ -1.18
PTPN6-220ENST00000543115 A0A087WYN8 130 aa7.66□□□□□ -1.18
PTPN6-220ENST00000543115 GATCO43716 136 aaKnown RBP7.66□□□□□ -1.18
PTPN6-220ENST00000543115 GAS8-AS1O95177 125 aa7.66□□□□□ -1.18
PTPN6-220ENST00000543115 SERTAD4-AS1Q5TG53 156 aa7.66□□□□□ -1.18
PTPN6-220ENST00000543115 ALKAL2Q6UX46 152 aa7.66□□□□□ -1.18
PTPN6-220ENST00000543115 SPACA4Q8TDM5 124 aa7.66□□□□□ -1.18
PTPN6-220ENST00000543115 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.65□□□□□ -1.18
PTPN6-220ENST00000543115 SDHAF1A6NFY7 115 aa7.65□□□□□ -1.18
PTPN6-220ENST00000543115 TMEM250H0YL14 139 aa7.65□□□□□ -1.18
PTPN6-220ENST00000543115 HIGD2BQ4VC39 106 aa7.65□□□□□ -1.18
PTPN6-220ENST00000543115 FAM231DQ6ZW35 169 aa7.65□□□□□ -1.18
PTPN6-220ENST00000543115 LYPD6BQ8NI32 183 aa7.65□□□□□ -1.18
PTPN6-220ENST00000543115 FAM231BA6NCW3 169 aa7.64□□□□□ -1.19
PTPN6-220ENST00000543115 NCR2O95944 276 aa7.64□□□□□ -1.19
PTPN6-220ENST00000543115 APCSP02743 223 aa7.64□□□□□ -1.19
PTPN6-220ENST00000543115 FGF6P10767 208 aa7.64□□□□□ -1.19
PTPN6-220ENST00000543115 CEBPGP53567 150 aa7.64□□□□□ -1.19
PTPN6-220ENST00000543115 AMMECR1LQ6DCA0 310 aa7.64□□□□□ -1.19
PTPN6-220ENST00000543115 RNASEKQ6P5S7 137 aaKnown RBP7.64□□□□□ -1.19
PTPN6-220ENST00000543115 SMIM15Q7Z3B0 74 aa7.64□□□□□ -1.19
PTPN6-220ENST00000543115 CHCHD10Q8WYQ3 142 aaPredicted RBP7.64□□□□□ -1.19
PTPN6-220ENST00000543115 A8MWL6 223 aa7.63□□□□□ -1.19
PTPN6-220ENST00000543115 MT1HL1P0DM35 61 aa7.63□□□□□ -1.19
PTPN6-220ENST00000543115 BLOC1S1P78537 153 aa7.63□□□□□ -1.19
PTPN6-220ENST00000543115 COX6A2Q02221 97 aa7.63□□□□□ -1.19
PTPN6-220ENST00000543115 DPH3Q96FX2 82 aa7.63□□□□□ -1.19
PTPN6-220ENST00000543115 RNF185Q96GF1 192 aa7.63□□□□□ -1.19
PTPN6-220ENST00000543115 HMCN2Q8NDA2 5059 aa7.63□□□□□ -1.19
PTPN6-220ENST00000543115 hCG_2014768A0A024R1R8 64 aa7.62□□□□□ -1.19
PTPN6-220ENST00000543115 TRBV6-5A0A0K0K1A5 114 aa7.62□□□□□ -1.19
PTPN6-220ENST00000543115 H7C423 109 aa7.62□□□□□ -1.19
PTPN6-220ENST00000543115 I3L3M4 83 aa7.62□□□□□ -1.19
PTPN6-220ENST00000543115 RPS10P46783 165 aaKnown RBP7.62□□□□□ -1.19
PTPN6-220ENST00000543115 FOXI1Q12951 378 aa7.62□□□□□ -1.19
PTPN6-220ENST00000543115 CT83Q5H943 113 aa7.62□□□□□ -1.19
PTPN6-220ENST00000543115 CFAP161Q6P656 301 aa7.62□□□□□ -1.19
PTPN6-220ENST00000543115 TEX261Q6UWH6 196 aa7.62□□□□□ -1.19
PTPN6-220ENST00000543115 AKAP14Q86UN6 197 aa7.62□□□□□ -1.19
PTPN6-220ENST00000543115 PRSS3P2Q8NHM4 247 aa7.62□□□□□ -1.19
PTPN6-220ENST00000543115 PLAC8Q9NZF1 115 aa7.62□□□□□ -1.19
PTPN6-220ENST00000543115 GVQW2A0A096LPI5 108 aaPredicted RBP7.61□□□□□ -1.19
PTPN6-220ENST00000543115 TSHBP01222 138 aa7.61□□□□□ -1.19
PTPN6-220ENST00000543115 ESDP10768 282 aa7.61□□□□□ -1.19
PTPN6-220ENST00000543115 PMCHP20382 165 aa7.61□□□□□ -1.19
PTPN6-220ENST00000543115 LINC01551Q86U37 167 aa7.61□□□□□ -1.19
PTPN6-220ENST00000543115 OR5A1Q8NGJ0 315 aa7.61□□□□□ -1.19
PTPN6-220ENST00000543115 TMEM242Q9NWH2 141 aa7.61□□□□□ -1.19
PTPN6-220ENST00000543115 IGKV2-24A0A0C4DH68 120 aa7.6□□□□□ -1.19
PTPN6-220ENST00000543115 HIGD1CA8MV81 97 aa7.6□□□□□ -1.19
PTPN6-220ENST00000543115 PHOX2AO14813 284 aa7.6□□□□□ -1.19
PTPN6-220ENST00000543115 NDUFS6O75380 124 aaKnown RBP7.6□□□□□ -1.19
PTPN6-220ENST00000543115 ZNF25P17030 456 aaPredicted RBP7.6□□□□□ -1.19
PTPN6-220ENST00000543115 XCL1P47992 114 aa7.6□□□□□ -1.19
PTPN6-220ENST00000543115 Q6ZRU5 148 aa7.6□□□□□ -1.19
PTPN6-220ENST00000543115 SMIM7Q9BQ49 75 aa7.6□□□□□ -1.19
PTPN6-220ENST00000543115 PLA2G2DQ9UNK4 145 aa7.6□□□□□ -1.19
PTPN6-220ENST00000543115 LINC00959A0A1B0GUT2 108 aa7.59□□□□□ -1.19
PTPN6-220ENST00000543115 A0A1B0GUT8 65 aa7.59□□□□□ -1.19
PTPN6-220ENST00000543115 CCL25O15444 150 aa7.59□□□□□ -1.19
PTPN6-220ENST00000543115 RAB4AP20338 218 aa7.59□□□□□ -1.19
PTPN6-220ENST00000543115 POLR2KP53803 58 aaKnown RBP7.59□□□□□ -1.19
PTPN6-220ENST00000543115 MAJINQ3KP22 176 aa7.59□□□□□ -1.19
PTPN6-220ENST00000543115 AMN1Q8IY45 258 aa7.59□□□□□ -1.19
PTPN6-220ENST00000543115 TSKUQ8WUA8 353 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms