RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 NTF3P20783 257 aa12.53□□□□□ -0.4
CACNA1C-230ENST00000543114 CTRLP40313 264 aa12.53□□□□□ -0.4
CACNA1C-230ENST00000543114 SULT1A2P50226 295 aa12.53□□□□□ -0.4
CACNA1C-230ENST00000543114 TEX46H3BTG2 121 aa12.52□□□□□ -0.41
CACNA1C-230ENST00000543114 BCL2P10415 239 aa12.52□□□□□ -0.41
CACNA1C-230ENST00000543114 MED9Q9NWA0 146 aa12.52□□□□□ -0.41
CACNA1C-230ENST00000543114 CHTF8P0CG12 524 aa12.51□□□□□ -0.41
CACNA1C-230ENST00000543114 AMTP48728 403 aa12.51□□□□□ -0.41
CACNA1C-230ENST00000543114 C9orf62Q8N4C0 152 aa12.51□□□□□ -0.41
CACNA1C-230ENST00000543114 UBE2L6O14933 153 aa12.5□□□□□ -0.41
CACNA1C-230ENST00000543114 COTL1Q14019 142 aa12.5□□□□□ -0.41
CACNA1C-230ENST00000543114 EIF5AL1Q6IS14 154 aaKnown RBP12.5□□□□□ -0.41
CACNA1C-230ENST00000543114 NUDT10Q8NFP7 164 aa12.5□□□□□ -0.41
CACNA1C-230ENST00000543114 NUDT11Q96G61 164 aa12.5□□□□□ -0.41
CACNA1C-230ENST00000543114 PLA2G2DQ9UNK4 145 aa12.5□□□□□ -0.41
CACNA1C-230ENST00000543114 IGHV3-64A0A075B6Q5 118 aa12.49□□□□□ -0.41
CACNA1C-230ENST00000543114 TRAV26-2A0A0B4J265 109 aa12.49□□□□□ -0.41
CACNA1C-230ENST00000543114 CNFNQ9BYD5 112 aa12.49□□□□□ -0.41
CACNA1C-230ENST00000543114 BIN3Q9NQY0 253 aa12.49□□□□□ -0.41
CACNA1C-230ENST00000543114 AP5S1Q9NUS5 200 aa12.49□□□□□ -0.41
CACNA1C-230ENST00000543114 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.48□□□□□ -0.41
CACNA1C-230ENST00000543114 WDR73Q6P4I2 378 aa12.48□□□□□ -0.41
CACNA1C-230ENST00000543114 C15orf56Q8N910 161 aa12.48□□□□□ -0.41
CACNA1C-230ENST00000543114 GATD1Q8NB37 220 aa12.48□□□□□ -0.41
CACNA1C-230ENST00000543114 SPACA4Q8TDM5 124 aa12.48□□□□□ -0.41
CACNA1C-230ENST00000543114 K7EN84 100 aa12.47□□□□□ -0.41
CACNA1C-230ENST00000543114 MT1HL1P0DM35 61 aa12.47□□□□□ -0.41
CACNA1C-230ENST00000543114 TWIST1Q15672 202 aa12.47□□□□□ -0.41
CACNA1C-230ENST00000543114 RNASE7Q9H1E1 156 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-230ENST00000543114 RPP21Q9H633 154 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-230ENST00000543114 A0A087WYN8 130 aa12.46□□□□□ -0.41
CACNA1C-230ENST00000543114 IGKV3OR2-268A0A0C4DH90 116 aa12.46□□□□□ -0.41
CACNA1C-230ENST00000543114 Q6ZNX1 250 aa12.46□□□□□ -0.41
CACNA1C-230ENST00000543114 TNXBP22105 4242 aa12.46□□□□□ -0.42
CACNA1C-230ENST00000543114 GAGE12HA6NDE8 117 aa12.45□□□□□ -0.42
CACNA1C-230ENST00000543114 RPL39LQ96EH5 51 aaKnown RBP12.45□□□□□ -0.42
CACNA1C-230ENST00000543114 RNF185Q96GF1 192 aa12.44□□□□□ -0.42
CACNA1C-230ENST00000543114 HIGD2BQ4VC39 106 aa12.43□□□□□ -0.42
CACNA1C-230ENST00000543114 Q6ZRU5 148 aa12.43□□□□□ -0.42
CACNA1C-230ENST00000543114 GTSF1Q8WW33 167 aa12.43□□□□□ -0.42
CACNA1C-230ENST00000543114 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.42□□□□□ -0.42
CACNA1C-230ENST00000543114 IGKV2-29A2NJV5 120 aaPredicted RBP12.42□□□□□ -0.42
CACNA1C-230ENST00000543114 FOXA3P55318 350 aaPredicted RBP12.42□□□□□ -0.42
CACNA1C-230ENST00000543114 SLC51BQ86UW2 128 aa12.42□□□□□ -0.42
CACNA1C-230ENST00000543114 OCC1Q8TAD7 63 aa12.42□□□□□ -0.42
CACNA1C-230ENST00000543114 DPH3Q96FX2 82 aa12.42□□□□□ -0.42
CACNA1C-230ENST00000543114 PLAC8Q9NZF1 115 aa12.42□□□□□ -0.42
CACNA1C-230ENST00000543114 COX6A2Q02221 97 aa12.41□□□□□ -0.42
CACNA1C-230ENST00000543114 AMMECR1LQ6DCA0 310 aa12.41□□□□□ -0.42
CACNA1C-230ENST00000543114 TCTE3Q8IZS6 198 aa12.41□□□□□ -0.42
CACNA1C-230ENST00000543114 CHCHD10Q8WYQ3 142 aaPredicted RBP12.41□□□□□ -0.42
CACNA1C-230ENST00000543114 PHOX2AO14813 284 aa12.4□□□□□ -0.42
CACNA1C-230ENST00000543114 NCR2O95944 276 aa12.4□□□□□ -0.42
CACNA1C-230ENST00000543114 APCSP02743 223 aa12.4□□□□□ -0.42
CACNA1C-230ENST00000543114 TAGLN2P37802 199 aaKnown RBP12.4□□□□□ -0.42
CACNA1C-230ENST00000543114 SDHAF1A6NFY7 115 aa12.39□□□□□ -0.43
CACNA1C-230ENST00000543114 FGF6P10767 208 aa12.39□□□□□ -0.43
CACNA1C-230ENST00000543114 RPS10P46783 165 aaKnown RBP12.39□□□□□ -0.43
CACNA1C-230ENST00000543114 RNASEKQ6P5S7 137 aaKnown RBP12.39□□□□□ -0.43
CACNA1C-230ENST00000543114 CFAP161Q6P656 301 aa12.39□□□□□ -0.43
CACNA1C-230ENST00000543114 GVQW2A0A096LPI5 108 aaPredicted RBP12.38□□□□□ -0.43
CACNA1C-230ENST00000543114 PRSS3P2Q8NHM4 247 aa12.38□□□□□ -0.43
CACNA1C-230ENST00000543114 IGKV2-24A0A0C4DH68 120 aa12.37□□□□□ -0.43
CACNA1C-230ENST00000543114 H7C423 109 aa12.37□□□□□ -0.43
CACNA1C-230ENST00000543114 NDUFS6O75380 124 aaKnown RBP12.37□□□□□ -0.43
CACNA1C-230ENST00000543114 SMIM15Q7Z3B0 74 aa12.37□□□□□ -0.43
CACNA1C-230ENST00000543114 FOXI1Q12951 378 aa12.36□□□□□ -0.43
CACNA1C-230ENST00000543114 MAJINQ3KP22 176 aa12.36□□□□□ -0.43
CACNA1C-230ENST00000543114 C7orf33Q8WU49 177 aa12.36□□□□□ -0.43
CACNA1C-230ENST00000543114 GATCO43716 136 aaKnown RBP12.35□□□□□ -0.43
CACNA1C-230ENST00000543114 GAS8-AS1O95177 125 aa12.35□□□□□ -0.43
CACNA1C-230ENST00000543114 TEX261Q6UWH6 196 aa12.35□□□□□ -0.43
CACNA1C-230ENST00000543114 FAM231BA6NCW3 169 aa12.34□□□□□ -0.43
CACNA1C-230ENST00000543114 TMEM250H0YL14 139 aa12.34□□□□□ -0.43
CACNA1C-230ENST00000543114 ZNF25P17030 456 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-230ENST00000543114 FAM231DQ6ZW35 169 aa12.34□□□□□ -0.43
CACNA1C-230ENST00000543114 OR5A1Q8NGJ0 315 aa12.34□□□□□ -0.43
CACNA1C-230ENST00000543114 A0A096LNI7 61 aa12.33□□□□□ -0.44
CACNA1C-230ENST00000543114 TRBV6-5A0A0K0K1A5 114 aa12.33□□□□□ -0.44
CACNA1C-230ENST00000543114 I3L3M4 83 aa12.33□□□□□ -0.44
CACNA1C-230ENST00000543114 XCL1P47992 114 aa12.33□□□□□ -0.44
CACNA1C-230ENST00000543114 A8MWL6 223 aa12.32□□□□□ -0.44
CACNA1C-230ENST00000543114 TSHBP01222 138 aa12.32□□□□□ -0.44
CACNA1C-230ENST00000543114 PMCHP20382 165 aa12.32□□□□□ -0.44
CACNA1C-230ENST00000543114 PRR3P79522 188 aaKnown RBP12.32□□□□□ -0.44
CACNA1C-230ENST00000543114 ALKAL2Q6UX46 152 aa12.32□□□□□ -0.44
CACNA1C-230ENST00000543114 STPG4Q8N801 248 aa12.32□□□□□ -0.44
CACNA1C-230ENST00000543114 TMEM242Q9NWH2 141 aa12.32□□□□□ -0.44
CACNA1C-230ENST00000543114 ESDP10768 282 aa12.31□□□□□ -0.44
CACNA1C-230ENST00000543114 CT83Q5H943 113 aa12.31□□□□□ -0.44
CACNA1C-230ENST00000543114 LINC00526Q96FQ7 95 aa12.31□□□□□ -0.44
CACNA1C-230ENST00000543114 LRP2P98164 4655 aa12.3□□□□□ -0.44
CACNA1C-230ENST00000543114 LINC00959A0A1B0GUT2 108 aa12.3□□□□□ -0.44
CACNA1C-230ENST00000543114 CCL25O15444 150 aa12.3□□□□□ -0.44
CACNA1C-230ENST00000543114 CEBPGP53567 150 aa12.3□□□□□ -0.44
CACNA1C-230ENST00000543114 BTF3L4Q96K17 158 aa12.3□□□□□ -0.44
CACNA1C-230ENST00000543114 LYPD6BQ8NI32 183 aa12.29□□□□□ -0.44
CACNA1C-230ENST00000543114 MRAP2Q96G30 205 aa12.29□□□□□ -0.44
CACNA1C-230ENST00000543114 TMEM101Q96IK0 257 aa12.29□□□□□ -0.44
CACNA1C-230ENST00000543114 BORCS7Q96B45 105 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms