RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 ATP5EP2Q5VTU8 51 aa2.75□□□□□ -1.97
MDM2-229ENST00000543046 WDR86Q86TI4 376 aa2.75□□□□□ -1.97
MDM2-229ENST00000543046 IMMP1LQ96LU5 166 aa2.75□□□□□ -1.97
MDM2-229ENST00000543046 OBSCN-AS1Q96MR7 158 aa2.75□□□□□ -1.97
MDM2-229ENST00000543046 PROK2Q9HC23 129 aa2.75□□□□□ -1.97
MDM2-229ENST00000543046 SPRR3Q9UBC9 169 aa2.75□□□□□ -1.97
MDM2-229ENST00000543046 XCL2Q9UBD3 114 aa2.75□□□□□ -1.97
MDM2-229ENST00000543046 UBE2D4Q9Y2X8 147 aa2.75□□□□□ -1.97
MDM2-229ENST00000543046 RP1P56715 2156 aa2.74□□□□□ -1.97
MDM2-229ENST00000543046 TRAV7A0A075B6U4 112 aa2.74□□□□□ -1.97
MDM2-229ENST00000543046 IGHV3-43A0A0B4J1X8 118 aa2.74□□□□□ -1.97
MDM2-229ENST00000543046 IGHV1OR15-9A0A0B4J2B8 117 aa2.74□□□□□ -1.97
MDM2-229ENST00000543046 PLAC8L1A1L4L8 177 aa2.74□□□□□ -1.97
MDM2-229ENST00000543046 RBMY1BA6NDE4 496 aaKnown RBP2.74□□□□□ -1.97
MDM2-229ENST00000543046 RBMY1EA6NEQ0 496 aaKnown RBP2.74□□□□□ -1.97
MDM2-229ENST00000543046 DEFB108AA8MXU0 73 aa2.74□□□□□ -1.97
MDM2-229ENST00000543046 IBA57-AS1B1ANH7 110 aa2.74□□□□□ -1.97
MDM2-229ENST00000543046 H3BRN7 92 aa2.74□□□□□ -1.97
MDM2-229ENST00000543046 H7BZZ5 65 aa2.74□□□□□ -1.97
MDM2-229ENST00000543046 M0R3E3 92 aa2.74□□□□□ -1.97
MDM2-229ENST00000543046 CCKP06307 115 aa2.74□□□□□ -1.97
MDM2-229ENST00000543046 RBMY1DP0C7P1 496 aaKnown RBP2.74□□□□□ -1.97
MDM2-229ENST00000543046 RBMY1A1P0DJD3 496 aaKnown RBP2.74□□□□□ -1.97
MDM2-229ENST00000543046 RBMY1CP0DJD4 496 aa2.74□□□□□ -1.97
MDM2-229ENST00000543046 IGHV3-43DP0DP04 118 aa2.74□□□□□ -1.97
MDM2-229ENST00000543046 RBMY1FQ15415 496 aaKnown RBP2.74□□□□□ -1.97
MDM2-229ENST00000543046 ZNF826PQ6ZT77 177 aa2.74□□□□□ -1.97
MDM2-229ENST00000543046 DYNAPQ8N1N2 210 aa2.74□□□□□ -1.97
MDM2-229ENST00000543046 EEF1AKMT3Q96AZ1 226 aa2.74□□□□□ -1.97
MDM2-229ENST00000543046 LTBP2Q14767 1821 aa2.74□□□□□ -1.97
MDM2-229ENST00000543046 TRAV8-3A0A0A6YYJ7 113 aa2.73□□□□□ -1.97
MDM2-229ENST00000543046 IGHV3-15A0A0B4J1V0 119 aa2.73□□□□□ -1.97
MDM2-229ENST00000543046 IGHV5-51A0A0C4DH38 117 aa2.73□□□□□ -1.97
MDM2-229ENST00000543046 IGHV1-58A0A0C4DH39 117 aa2.73□□□□□ -1.97
MDM2-229ENST00000543046 FAM223BA6NKX1 122 aa2.73□□□□□ -1.97
MDM2-229ENST00000543046 MRPL33O75394 65 aaKnown RBP2.73□□□□□ -1.97
MDM2-229ENST00000543046 IGHV1-69P01742 117 aa2.73□□□□□ -1.97
MDM2-229ENST00000543046 SAA2P0DJI9 122 aaPredicted RBP2.73□□□□□ -1.97
MDM2-229ENST00000543046 WT1-ASQ06250 92 aa2.73□□□□□ -1.97
MDM2-229ENST00000543046 NSUN5P1Q3KNT7 163 aa2.73□□□□□ -1.97
MDM2-229ENST00000543046 ZNF833PQ6ZTB9 187 aa2.73□□□□□ -1.97
MDM2-229ENST00000543046 DAZ4Q86SG3 579 aaKnown RBP2.73□□□□□ -1.97
MDM2-229ENST00000543046 C14orf178Q8N769 122 aaPredicted RBP2.73□□□□□ -1.97
MDM2-229ENST00000543046 BRK1Q8WUW1 75 aa2.73□□□□□ -1.97
MDM2-229ENST00000543046 PATE1Q8WXA2 126 aa2.73□□□□□ -1.97
MDM2-229ENST00000543046 LINC00167Q96N53 147 aa2.73□□□□□ -1.97
MDM2-229ENST00000543046 DAZ1Q9NQZ3 744 aaKnown RBP2.73□□□□□ -1.97
MDM2-229ENST00000543046 DAZ3Q9NR90 486 aaKnown RBP2.73□□□□□ -1.97
MDM2-229ENST00000543046 MRPL36Q9P0J6 103 aaKnown RBP2.73□□□□□ -1.97
MDM2-229ENST00000543046 C22orf24Q9Y442 160 aa2.73□□□□□ -1.97
MDM2-229ENST00000543046 INTS1Q8N201 2190 aaKnown RBP2.73□□□□□ -1.97
MDM2-229ENST00000543046 KNTC1P50748 2209 aa2.72□□□□□ -1.97
MDM2-229ENST00000543046 H7C2G1 150 aa2.72□□□□□ -1.97
MDM2-229ENST00000543046 ERC2-IT1O76042 136 aa2.72□□□□□ -1.97
MDM2-229ENST00000543046 SAA1P0DJI8 122 aaPredicted RBP2.72□□□□□ -1.97
MDM2-229ENST00000543046 POLR2KP53803 58 aaKnown RBP2.72□□□□□ -1.97
MDM2-229ENST00000543046 TSPEAR-AS2P59090 65 aa2.72□□□□□ -1.97
MDM2-229ENST00000543046 MIAQ16674 131 aa2.72□□□□□ -1.97
MDM2-229ENST00000543046 KRTAP13-3Q3SY46 172 aa2.72□□□□□ -1.97
MDM2-229ENST00000543046 IGFL2Q6UWQ7 119 aa2.72□□□□□ -1.97
MDM2-229ENST00000543046 TMEM61Q8N0U2 210 aa2.72□□□□□ -1.97
MDM2-229ENST00000543046 WFDC11Q8NEX6 87 aa2.72□□□□□ -1.97
MDM2-229ENST00000543046 ZNF702PQ9H963 129 aa2.72□□□□□ -1.97
MDM2-229ENST00000543046 PCNX2A6NKB5 2137 aa2.71□□□□□ -1.98
MDM2-229ENST00000543046 TRAV13-2A0A0B4J235 113 aa2.71□□□□□ -1.98
MDM2-229ENST00000543046 IGHV7-4-1A0A0J9YVY3 117 aa2.71□□□□□ -1.98
MDM2-229ENST00000543046 TRBV6-5A0A0K0K1A5 114 aa2.71□□□□□ -1.98
MDM2-229ENST00000543046 A0A0U1RQV1 116 aa2.71□□□□□ -1.98
MDM2-229ENST00000543046 SPTY2D1-AS1A0A0U1RR47 76 aa2.71□□□□□ -1.98
MDM2-229ENST00000543046 E7EUB6 86 aa2.71□□□□□ -1.98
MDM2-229ENST00000543046 IGHV4-34P06331 123 aa2.71□□□□□ -1.98
MDM2-229ENST00000543046 GPHB5Q86YW7 130 aa2.71□□□□□ -1.98
MDM2-229ENST00000543046 FAM223AQ8IWN6 122 aa2.71□□□□□ -1.98
MDM2-229ENST00000543046 CLEC2BQ92478 149 aa2.71□□□□□ -1.98
MDM2-229ENST00000543046 RNASE6Q93091 150 aaKnown RBP2.71□□□□□ -1.98
MDM2-229ENST00000543046 CCL13Q99616 98 aa2.71□□□□□ -1.98
MDM2-229ENST00000543046 RETNQ9HD89 108 aa2.71□□□□□ -1.98
MDM2-229ENST00000543046 LENEPQ9Y5L5 61 aa2.71□□□□□ -1.98
MDM2-229ENST00000543046 MED12Q93074 2177 aa2.71□□□□□ -1.98
MDM2-229ENST00000543046 IGHV1-18A0A0C4DH31 117 aa2.7□□□□□ -1.98
MDM2-229ENST00000543046 IGKV3D-7A0A0C4DH55 119 aa2.7□□□□□ -1.98
MDM2-229ENST00000543046 LYRM9A8MSI8 78 aa2.7□□□□□ -1.98
MDM2-229ENST00000543046 H0YGX0 51 aa2.7□□□□□ -1.98
MDM2-229ENST00000543046 I3L2K1 104 aa2.7□□□□□ -1.98
MDM2-229ENST00000543046 NDUFB3O43676 98 aa2.7□□□□□ -1.98
MDM2-229ENST00000543046 IGKV1-17P01599 117 aa2.7□□□□□ -1.98
MDM2-229ENST00000543046 IGLV2-23P01705 113 aa2.7□□□□□ -1.98
MDM2-229ENST00000543046 IGHV3-23P01764 117 aa2.7□□□□□ -1.98
MDM2-229ENST00000543046 IGKV1-16P04430 117 aa2.7□□□□□ -1.98
MDM2-229ENST00000543046 PRR4Q16378 134 aa2.7□□□□□ -1.98
MDM2-229ENST00000543046 C11orf71Q6IPW1 123 aa2.7□□□□□ -1.98
MDM2-229ENST00000543046 C20orf197Q8N268 126 aa2.7□□□□□ -1.98
MDM2-229ENST00000543046 C16orf74Q96GX8 76 aa2.7□□□□□ -1.98
MDM2-229ENST00000543046 RNF5Q99942 180 aa2.7□□□□□ -1.98
MDM2-229ENST00000543046 TM2D3Q9BRN9 247 aa2.7□□□□□ -1.98
MDM2-229ENST00000543046 LINC00846Q9NV44 126 aa2.7□□□□□ -1.98
MDM2-229ENST00000543046 RAI1Q7Z5J4 1906 aaPredicted RBP2.7□□□□□ -1.98
MDM2-229ENST00000543046 NACAE9PAV3 2078 aa2.69□□□□□ -1.98
MDM2-229ENST00000543046 IGKV1D-17A0A075B6S4 117 aa2.69□□□□□ -1.98
MDM2-229ENST00000543046 IGHV5-10-1A0A0J9YXX1 117 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms