RNA–Protein interactions for RNA: ENST00000542700.6

CHMP4A-209, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3

Gene CHMP4A, Length 847 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-209ENST00000542700 GAGE12FP0CL80 117 aa5.09□□□□□ -1.59
CHMP4A-209ENST00000542700 GAGE12GP0CL81 117 aa5.09□□□□□ -1.59
CHMP4A-209ENST00000542700 GAGE12IP0CL82 117 aa5.09□□□□□ -1.59
CHMP4A-209ENST00000542700 RAB4AP20338 218 aa5.09□□□□□ -1.59
CHMP4A-209ENST00000542700 CKS2P33552 79 aa5.09□□□□□ -1.59
CHMP4A-209ENST00000542700 FAM74A4Q5TZK3 123 aa5.09□□□□□ -1.59
CHMP4A-209ENST00000542700 C11orf72Q8NBR9 251 aa5.09□□□□□ -1.59
CHMP4A-209ENST00000542700 TRAV9-2A0A087WT02 112 aa5.08□□□□□ -1.6
CHMP4A-209ENST00000542700 A0A087WWL8 130 aa5.08□□□□□ -1.6
CHMP4A-209ENST00000542700 IGHV3-73A0A0B4J1V6 119 aa5.08□□□□□ -1.6
CHMP4A-209ENST00000542700 A8MWV9 139 aa5.08□□□□□ -1.6
CHMP4A-209ENST00000542700 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.08□□□□□ -1.6
CHMP4A-209ENST00000542700 SMKR1H3BMG3 65 aa5.08□□□□□ -1.6
CHMP4A-209ENST00000542700 IGHV3-53P01767 116 aa5.08□□□□□ -1.6
CHMP4A-209ENST00000542700 S100A6P06703 90 aa5.08□□□□□ -1.6
CHMP4A-209ENST00000542700 SLAQ13239 276 aa5.08□□□□□ -1.6
CHMP4A-209ENST00000542700 MRPL51Q4U2R6 128 aaKnown RBP5.08□□□□□ -1.6
CHMP4A-209ENST00000542700 GATD1Q8NB37 220 aa5.08□□□□□ -1.6
CHMP4A-209ENST00000542700 OR4C5Q8NGB2 326 aa5.08□□□□□ -1.6
CHMP4A-209ENST00000542700 RNASE8Q8TDE3 154 aaKnown RBP5.08□□□□□ -1.6
CHMP4A-209ENST00000542700 PTH2Q96A98 100 aa5.08□□□□□ -1.6
CHMP4A-209ENST00000542700 AP1S3Q96PC3 154 aa5.08□□□□□ -1.6
CHMP4A-209ENST00000542700 CNFNQ9BYD5 112 aa5.08□□□□□ -1.6
CHMP4A-209ENST00000542700 TRGV2A0A075B6R0 118 aa5.07□□□□□ -1.6
CHMP4A-209ENST00000542700 A0A096LPF7 62 aa5.07□□□□□ -1.6
CHMP4A-209ENST00000542700 LOC389332A0A1B0GUA5 103 aa5.07□□□□□ -1.6
CHMP4A-209ENST00000542700 D6R8Y8 96 aa5.07□□□□□ -1.6
CHMP4A-209ENST00000542700 SRIP30626 198 aa5.07□□□□□ -1.6
CHMP4A-209ENST00000542700 ZNF56Q15929 161 aa5.07□□□□□ -1.6
CHMP4A-209ENST00000542700 Q6ZTI0 123 aa5.07□□□□□ -1.6
CHMP4A-209ENST00000542700 BAGE3Q86Y29 109 aa5.07□□□□□ -1.6
CHMP4A-209ENST00000542700 RNF185Q96GF1 192 aa5.07□□□□□ -1.6
CHMP4A-209ENST00000542700 PRELID3AQ96N28 172 aa5.07□□□□□ -1.6
CHMP4A-209ENST00000542700 SAMD10Q9BYL1 202 aa5.07□□□□□ -1.6
CHMP4A-209ENST00000542700 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.06□□□□□ -1.6
CHMP4A-209ENST00000542700 PLAC8L1A1L4L8 177 aa5.06□□□□□ -1.6
CHMP4A-209ENST00000542700 HIST1H2BKO60814 126 aa5.06□□□□□ -1.6
CHMP4A-209ENST00000542700 NCR2O95944 276 aa5.06□□□□□ -1.6
CHMP4A-209ENST00000542700 HIST1H2BJP06899 126 aa5.06□□□□□ -1.6
CHMP4A-209ENST00000542700 CRYGDP07320 174 aa5.06□□□□□ -1.6
CHMP4A-209ENST00000542700 GATA1P15976 413 aaPredicted RBP5.06□□□□□ -1.6
CHMP4A-209ENST00000542700 HIST1H2BOP23527 126 aa5.06□□□□□ -1.6
CHMP4A-209ENST00000542700 HIST1H2BBP33778 126 aa5.06□□□□□ -1.6
CHMP4A-209ENST00000542700 HIST1H2BDP58876 126 aa5.06□□□□□ -1.6
CHMP4A-209ENST00000542700 HIST1H2BCP62807 126 aa5.06□□□□□ -1.6
CHMP4A-209ENST00000542700 DAZ2Q13117 558 aaKnown RBP5.06□□□□□ -1.6
CHMP4A-209ENST00000542700 HIST2H2BEQ16778 126 aa5.06□□□□□ -1.6
CHMP4A-209ENST00000542700 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.06□□□□□ -1.6
CHMP4A-209ENST00000542700 ORMDL3Q8N138 153 aa5.06□□□□□ -1.6
CHMP4A-209ENST00000542700 PRSS3P2Q8NHM4 247 aa5.06□□□□□ -1.6
CHMP4A-209ENST00000542700 RASL10AQ92737 203 aa5.06□□□□□ -1.6
CHMP4A-209ENST00000542700 HIST1H2BHQ93079 126 aa5.06□□□□□ -1.6
CHMP4A-209ENST00000542700 MRAP2Q96G30 205 aa5.06□□□□□ -1.6
CHMP4A-209ENST00000542700 HIST1H2BNQ99877 126 aa5.06□□□□□ -1.6
CHMP4A-209ENST00000542700 HIST1H2BMQ99879 126 aa5.06□□□□□ -1.6
CHMP4A-209ENST00000542700 ALKBH7Q9BT30 221 aaPredicted RBP5.06□□□□□ -1.6
CHMP4A-209ENST00000542700 TRAV26-2A0A0B4J265 109 aa5.05□□□□□ -1.6
CHMP4A-209ENST00000542700 TRAV4A0A0B4J268 109 aa5.05□□□□□ -1.6
CHMP4A-209ENST00000542700 TRGV4A0A0C4DH28 118 aa5.05□□□□□ -1.6
CHMP4A-209ENST00000542700 H3BNG1 76 aa5.05□□□□□ -1.6
CHMP4A-209ENST00000542700 PANO1I0J062 215 aa5.05□□□□□ -1.6
CHMP4A-209ENST00000542700 PHOX2AO14813 284 aa5.05□□□□□ -1.6
CHMP4A-209ENST00000542700 PPBPP02775 128 aa5.05□□□□□ -1.6
CHMP4A-209ENST00000542700 WFDC2Q14508 124 aa5.05□□□□□ -1.6
CHMP4A-209ENST00000542700 IQCJQ1A5X6 159 aa5.05□□□□□ -1.6
CHMP4A-209ENST00000542700 OR10J3Q5JRS4 329 aa5.05□□□□□ -1.6
CHMP4A-209ENST00000542700 PIK3CD-AS1Q5SR53 167 aa5.05□□□□□ -1.6
CHMP4A-209ENST00000542700 CFAP126Q5VTH2 177 aa5.05□□□□□ -1.6
CHMP4A-209ENST00000542700 NIT1Q86X76 327 aa5.05□□□□□ -1.6
CHMP4A-209ENST00000542700 ZNF479Q96JC4 524 aa5.05□□□□□ -1.6
CHMP4A-209ENST00000542700 LINC01600Q96MT4 127 aa5.05□□□□□ -1.6
CHMP4A-209ENST00000542700 KIF25-AS1Q9Y6Z4 181 aa5.05□□□□□ -1.6
CHMP4A-209ENST00000542700 RHODO00212 210 aa5.04□□□□□ -1.6
CHMP4A-209ENST00000542700 TNFRSF6BO95407 300 aa5.04□□□□□ -1.6
CHMP4A-209ENST00000542700 NPYP01303 97 aa5.04□□□□□ -1.6
CHMP4A-209ENST00000542700 SNRPEP62304 92 aaKnown RBP5.04□□□□□ -1.6
CHMP4A-209ENST00000542700 Q0VG73 95 aa5.04□□□□□ -1.6
CHMP4A-209ENST00000542700 SUMO4Q6EEV6 95 aa5.04□□□□□ -1.6
CHMP4A-209ENST00000542700 C18orf32Q8TCD1 76 aa5.04□□□□□ -1.6
CHMP4A-209ENST00000542700 MAP1LC3AQ9H492 121 aa5.04□□□□□ -1.6
CHMP4A-209ENST00000542700 H7C1H1 209 aa5.03□□□□□ -1.6
CHMP4A-209ENST00000542700 CIDEAO60543 219 aa5.03□□□□□ -1.6
CHMP4A-209ENST00000542700 PPP1R17O96001 155 aa5.03□□□□□ -1.6
CHMP4A-209ENST00000542700 LINC00614P0C842 121 aa5.03□□□□□ -1.6
CHMP4A-209ENST00000542700 PMCHP20382 165 aa5.03□□□□□ -1.6
CHMP4A-209ENST00000542700 RNASEKQ6P5S7 137 aaKnown RBP5.03□□□□□ -1.6
CHMP4A-209ENST00000542700 ZFP2Q6ZN57 461 aa5.03□□□□□ -1.6
CHMP4A-209ENST00000542700 FA2HQ7L5A8 372 aa5.03□□□□□ -1.6
CHMP4A-209ENST00000542700 RPL39LQ96EH5 51 aaKnown RBP5.03□□□□□ -1.6
CHMP4A-209ENST00000542700 ST20Q9HBF5 79 aa5.03□□□□□ -1.6
CHMP4A-209ENST00000542700 NIT2Q9NQR4 276 aa5.03□□□□□ -1.6
CHMP4A-209ENST00000542700 LECT2O14960 151 aa5.02□□□□□ -1.61
CHMP4A-209ENST00000542700 S100A2P29034 98 aa5.02□□□□□ -1.61
CHMP4A-209ENST00000542700 IFI27P40305 119 aaPredicted RBP5.02□□□□□ -1.61
CHMP4A-209ENST00000542700 FHL2Q14192 279 aa5.02□□□□□ -1.61
CHMP4A-209ENST00000542700 WFDC10BQ8IUB3 73 aa5.02□□□□□ -1.61
CHMP4A-209ENST00000542700 VSIG2Q96IQ7 327 aa5.02□□□□□ -1.61
CHMP4A-209ENST00000542700 Q9HAA7 133 aa5.02□□□□□ -1.61
CHMP4A-209ENST00000542700 LAMTOR2Q9Y2Q5 125 aa5.02□□□□□ -1.61
CHMP4A-209ENST00000542700 GAGE12JA6NER3 117 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms