RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 KIAA0100Q14667 2235 aaKnown RBP4.2□□□□□ -1.74
XRCC4-206ENST00000542685 TRAV8-3A0A0A6YYJ7 113 aa4.2□□□□□ -1.74
XRCC4-206ENST00000542685 NDUFAF8A1L188 74 aa4.2□□□□□ -1.74
XRCC4-206ENST00000542685 LYPD5Q6UWN5 251 aa4.2□□□□□ -1.74
XRCC4-206ENST00000542685 KLHL30-AS1Q8NEE0 82 aa4.2□□□□□ -1.74
XRCC4-206ENST00000542685 DYNLRB2Q8TF09 96 aa4.2□□□□□ -1.74
XRCC4-206ENST00000542685 OBSCN-AS1Q96MR7 158 aa4.2□□□□□ -1.74
XRCC4-206ENST00000542685 CHD9Q3L8U1 2897 aa4.2□□□□□ -1.74
XRCC4-206ENST00000542685 IGHV1-18A0A0C4DH31 117 aa4.19□□□□□ -1.74
XRCC4-206ENST00000542685 FAM223BA6NKX1 122 aa4.19□□□□□ -1.74
XRCC4-206ENST00000542685 H7C2G1 150 aa4.19□□□□□ -1.74
XRCC4-206ENST00000542685 IGLV2-23P01705 113 aa4.19□□□□□ -1.74
XRCC4-206ENST00000542685 IGKV1-16P04430 117 aa4.19□□□□□ -1.74
XRCC4-206ENST00000542685 TSPEAR-AS2P59090 65 aa4.19□□□□□ -1.74
XRCC4-206ENST00000542685 BLCAPP62952 87 aa4.19□□□□□ -1.74
XRCC4-206ENST00000542685 WT1-ASQ06250 92 aa4.19□□□□□ -1.74
XRCC4-206ENST00000542685 IGFL2Q6UWQ7 119 aa4.19□□□□□ -1.74
XRCC4-206ENST00000542685 VMO1Q7Z5L0 202 aa4.19□□□□□ -1.74
XRCC4-206ENST00000542685 C20orf197Q8N268 126 aa4.19□□□□□ -1.74
XRCC4-206ENST00000542685 RNASE6Q93091 150 aaKnown RBP4.19□□□□□ -1.74
XRCC4-206ENST00000542685 EEF1AKMT3Q96AZ1 226 aa4.19□□□□□ -1.74
XRCC4-206ENST00000542685 MRPL53Q96EL3 112 aaKnown RBP4.19□□□□□ -1.74
XRCC4-206ENST00000542685 GAFA1Q96PS6 74 aa4.19□□□□□ -1.74
XRCC4-206ENST00000542685 DCTN5Q9BTE1 182 aa4.19□□□□□ -1.74
XRCC4-206ENST00000542685 SPRR3Q9UBC9 169 aa4.19□□□□□ -1.74
XRCC4-206ENST00000542685 DSCAMO60469 2012 aa4.19□□□□□ -1.74
XRCC4-206ENST00000542685 SDK2Q58EX2 2172 aa4.19□□□□□ -1.74
XRCC4-206ENST00000542685 CABIN1Q9Y6J0 2220 aa4.18□□□□□ -1.74
XRCC4-206ENST00000542685 A0A0J9YWU9 116 aa4.18□□□□□ -1.74
XRCC4-206ENST00000542685 M0R1B8 84 aa4.18□□□□□ -1.74
XRCC4-206ENST00000542685 NDUFS5O43920 106 aa4.18□□□□□ -1.74
XRCC4-206ENST00000542685 BAALC-AS2P0C853 105 aa4.18□□□□□ -1.74
XRCC4-206ENST00000542685 SAA4P35542 130 aa4.18□□□□□ -1.74
XRCC4-206ENST00000542685 LMO4P61968 165 aa4.18□□□□□ -1.74
XRCC4-206ENST00000542685 SNRPD3P62318 126 aaKnown RBP4.18□□□□□ -1.74
XRCC4-206ENST00000542685 RBM3P98179 157 aaKnown RBP4.18□□□□□ -1.74
XRCC4-206ENST00000542685 FAM223AQ8IWN6 122 aa4.18□□□□□ -1.74
XRCC4-206ENST00000542685 C14orf178Q8N769 122 aaPredicted RBP4.18□□□□□ -1.74
XRCC4-206ENST00000542685 ZNRF1Q8ND25 227 aa4.18□□□□□ -1.74
XRCC4-206ENST00000542685 CLEC2BQ92478 149 aa4.18□□□□□ -1.74
XRCC4-206ENST00000542685 RNF5Q99942 180 aa4.18□□□□□ -1.74
XRCC4-206ENST00000542685 LENEPQ9Y5L5 61 aa4.18□□□□□ -1.74
XRCC4-206ENST00000542685 PRR14LQ5THK1 2151 aa4.18□□□□□ -1.74
XRCC4-206ENST00000542685 UNC80Q8N2C7 3258 aa4.18□□□□□ -1.74
XRCC4-206ENST00000542685 BRWD1Q9NSI6 2320 aa4.17□□□□□ -1.74
XRCC4-206ENST00000542685 GON4LQ3T8J9 2241 aa4.17□□□□□ -1.74
XRCC4-206ENST00000542685 A0A087WW49 117 aa4.17□□□□□ -1.74
XRCC4-206ENST00000542685 LYZP61626 148 aa4.17□□□□□ -1.74
XRCC4-206ENST00000542685 KTN1-AS1Q86SY8 53 aa4.17□□□□□ -1.74
XRCC4-206ENST00000542685 CCL13Q99616 98 aa4.17□□□□□ -1.74
XRCC4-206ENST00000542685 HES7Q9BYE0 225 aa4.17□□□□□ -1.74
XRCC4-206ENST00000542685 MOB4Q9Y3A3 225 aa4.17□□□□□ -1.74
XRCC4-206ENST00000542685 KNTC1P50748 2209 aa4.17□□□□□ -1.74
XRCC4-206ENST00000542685 TRBV27A0A0K0K1C4 114 aa4.16□□□□□ -1.74
XRCC4-206ENST00000542685 SOCS3O14543 225 aa4.16□□□□□ -1.74
XRCC4-206ENST00000542685 RPL27AP46776 148 aaKnown RBP4.16□□□□□ -1.74
XRCC4-206ENST00000542685 CIRBPQ14011 172 aaKnown RBP4.16□□□□□ -1.74
XRCC4-206ENST00000542685 ESRGQ1W209 222 aa4.16□□□□□ -1.74
XRCC4-206ENST00000542685 NSUN5P1Q3KNT7 163 aa4.16□□□□□ -1.74
XRCC4-206ENST00000542685 TM2D3Q9BRN9 247 aa4.16□□□□□ -1.74
XRCC4-206ENST00000542685 C11orf68Q9H3H3 251 aaKnown RBP4.16□□□□□ -1.74
XRCC4-206ENST00000542685 KAAG1Q9UBP8 84 aa4.16□□□□□ -1.74
XRCC4-206ENST00000542685 INTS1Q8N201 2190 aaKnown RBP4.16□□□□□ -1.74
XRCC4-206ENST00000542685 PCNX2A6NKB5 2137 aa4.15□□□□□ -1.74
XRCC4-206ENST00000542685 KNL1Q8NG31 2342 aa4.15□□□□□ -1.74
XRCC4-206ENST00000542685 IGHV7-4-1A0A0J9YVY3 117 aa4.15□□□□□ -1.75
XRCC4-206ENST00000542685 TRBV6-5A0A0K0K1A5 114 aa4.15□□□□□ -1.75
XRCC4-206ENST00000542685 E7EUB6 86 aa4.15□□□□□ -1.75
XRCC4-206ENST00000542685 JMJD7-PLA2G4BH0Y9G9 81 aa4.15□□□□□ -1.75
XRCC4-206ENST00000542685 H0YGX0 51 aa4.15□□□□□ -1.75
XRCC4-206ENST00000542685 M0R1W7 72 aa4.15□□□□□ -1.75
XRCC4-206ENST00000542685 TFF1P04155 84 aa4.15□□□□□ -1.75
XRCC4-206ENST00000542685 DSCR10P59022 87 aa4.15□□□□□ -1.75
XRCC4-206ENST00000542685 DAD1P61803 113 aa4.15□□□□□ -1.75
XRCC4-206ENST00000542685 Q1T7F1 81 aa4.15□□□□□ -1.75
XRCC4-206ENST00000542685 ADAMTSL4-AS1Q5T5F5 129 aa4.15□□□□□ -1.75
XRCC4-206ENST00000542685 SPANXN1Q5VSR9 72 aa4.15□□□□□ -1.75
XRCC4-206ENST00000542685 ZNF843Q8N446 348 aa4.15□□□□□ -1.75
XRCC4-206ENST00000542685 MRPL36Q9P0J6 103 aaKnown RBP4.15□□□□□ -1.75
XRCC4-206ENST00000542685 Q9UF83 564 aa4.15□□□□□ -1.75
XRCC4-206ENST00000542685 F8WEM9 126 aa4.14□□□□□ -1.75
XRCC4-206ENST00000542685 H3BTX0 84 aa4.14□□□□□ -1.75
XRCC4-206ENST00000542685 I3L2K1 104 aa4.14□□□□□ -1.75
XRCC4-206ENST00000542685 UBE2BP63146 152 aa4.14□□□□□ -1.75
XRCC4-206ENST00000542685 KLK9Q2XQG4 91 aa4.14□□□□□ -1.75
XRCC4-206ENST00000542685 Q8N2B8 174 aa4.14□□□□□ -1.75
XRCC4-206ENST00000542685 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
XRCC4-206ENST00000542685 DEFB127Q9H1M4 99 aa4.14□□□□□ -1.75
XRCC4-206ENST00000542685 KLK9Q9UKQ9 250 aa4.14□□□□□ -1.75
XRCC4-206ENST00000542685 PRRC2AP48634 2157 aaKnown RBP4.14□□□□□ -1.75
XRCC4-206ENST00000542685 MKI67P46013 3256 aaKnown RBP4.14□□□□□ -1.75
XRCC4-206ENST00000542685 CACNA1DQ01668 2161 aa4.13□□□□□ -1.75
XRCC4-206ENST00000542685 IGKV3D-7A0A0C4DH55 119 aa4.13□□□□□ -1.75
XRCC4-206ENST00000542685 IGHV3-64DA0A0J9YX35 117 aa4.13□□□□□ -1.75
XRCC4-206ENST00000542685 CCL21O00585 134 aa4.13□□□□□ -1.75
XRCC4-206ENST00000542685 IGKV1-17P01599 117 aa4.13□□□□□ -1.75
XRCC4-206ENST00000542685 IGHV1-46P01743 117 aa4.13□□□□□ -1.75
XRCC4-206ENST00000542685 TRGV3P03979 118 aa4.13□□□□□ -1.75
XRCC4-206ENST00000542685 CD28P10747 220 aa4.13□□□□□ -1.75
XRCC4-206ENST00000542685 MIFP14174 115 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms