RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 I3L2K1 104 aa8.3□□□□□ -1.08
CDH3-203ENST00000542274 K7EMT4 169 aa8.3□□□□□ -1.08
CDH3-203ENST00000542274 FAM223BA6NKX1 122 aa8.3□□□□□ -1.08
CDH3-203ENST00000542274 K7EIM0 57 aa8.3□□□□□ -1.08
CDH3-203ENST00000542274 Q1RN00 199 aa8.3□□□□□ -1.08
CDH3-203ENST00000542274 PVRIGQ6DKI7 326 aa8.3□□□□□ -1.08
CDH3-203ENST00000542274 LYPD5Q6UWN5 251 aa8.3□□□□□ -1.08
CDH3-203ENST00000542274 APCP25054 2843 aa8.29□□□□□ -1.08
CDH3-203ENST00000542274 M0R1W7 72 aa8.29□□□□□ -1.08
CDH3-203ENST00000542274 ZNF329Q86UD4 541 aa8.29□□□□□ -1.08
CDH3-203ENST00000542274 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.29□□□□□ -1.08
CDH3-203ENST00000542274 IGHV3OR16-8A0A075B7F1 116 aa8.29□□□□□ -1.08
CDH3-203ENST00000542274 USP17L23D6RBM5 183 aa8.29□□□□□ -1.08
CDH3-203ENST00000542274 IGKV1-17P01599 117 aa8.29□□□□□ -1.08
CDH3-203ENST00000542274 HOXD3P31249 432 aaPredicted RBP8.29□□□□□ -1.08
CDH3-203ENST00000542274 Q9H3A6 140 aa8.29□□□□□ -1.08
CDH3-203ENST00000542274 U3KQK5 164 aa8.29□□□□□ -1.08
CDH3-203ENST00000542274 CSPG4Q6UVK1 2322 aa8.29□□□□□ -1.08
CDH3-203ENST00000542274 IGHV3-35A0A0C4DH35 117 aa8.28□□□□□ -1.08
CDH3-203ENST00000542274 GATA1P15976 413 aaPredicted RBP8.28□□□□□ -1.08
CDH3-203ENST00000542274 PLNP26678 52 aa8.28□□□□□ -1.08
CDH3-203ENST00000542274 S100A7L2Q5SY68 101 aa8.28□□□□□ -1.08
CDH3-203ENST00000542274 LINC01559Q495D7 138 aa8.28□□□□□ -1.08
CDH3-203ENST00000542274 C6orf223Q8N319 242 aa8.28□□□□□ -1.08
CDH3-203ENST00000542274 MPLKIPQ8TAP9 179 aa8.28□□□□□ -1.08
CDH3-203ENST00000542274 PLAC8L1A1L4L8 177 aa8.27□□□□□ -1.09
CDH3-203ENST00000542274 IGHV3-30P01768 117 aa8.27□□□□□ -1.09
CDH3-203ENST00000542274 IGHV3-30-5P0DP03 117 aa8.27□□□□□ -1.09
CDH3-203ENST00000542274 FANCD2OSQ96PS1 177 aa8.27□□□□□ -1.09
CDH3-203ENST00000542274 GCN1Q92616 2671 aaKnown RBP8.27□□□□□ -1.09
CDH3-203ENST00000542274 TRBV7-6A0A0J9YX20 115 aa8.27□□□□□ -1.09
CDH3-203ENST00000542274 CCKP06307 115 aa8.27□□□□□ -1.09
CDH3-203ENST00000542274 PRSS2P07478 247 aa8.27□□□□□ -1.09
CDH3-203ENST00000542274 GP9P14770 177 aa8.27□□□□□ -1.09
CDH3-203ENST00000542274 C20orf197Q8N268 126 aa8.27□□□□□ -1.09
CDH3-203ENST00000542274 CCDC168Q8NDH2 2452 aa8.27□□□□□ -1.09
CDH3-203ENST00000542274 A0A087WVE0 104 aa8.26□□□□□ -1.09
CDH3-203ENST00000542274 SMKR1H3BMG3 65 aa8.26□□□□□ -1.09
CDH3-203ENST00000542274 H7BZZ5 65 aa8.26□□□□□ -1.09
CDH3-203ENST00000542274 NRACQ8N912 160 aa8.26□□□□□ -1.09
CDH3-203ENST00000542274 MAPK1IP1LQ8NDC0 245 aa8.26□□□□□ -1.09
CDH3-203ENST00000542274 NPBQ8NG41 125 aa8.26□□□□□ -1.09
CDH3-203ENST00000542274 COPS9Q8WXC6 57 aa8.26□□□□□ -1.09
CDH3-203ENST00000542274 C11orf68Q9H3H3 251 aaKnown RBP8.26□□□□□ -1.09
CDH3-203ENST00000542274 FASNP49327 2511 aaKnown RBP8.26□□□□□ -1.09
CDH3-203ENST00000542274 PRR26Q8N8Z3 221 aa8.26□□□□□ -1.09
CDH3-203ENST00000542274 ZNF469Q96JG9 3925 aaPredicted RBP8.25□□□□□ -1.09
CDH3-203ENST00000542274 EIF4EBP3O60516 100 aaPredicted RBP8.25□□□□□ -1.09
CDH3-203ENST00000542274 PLA2G2AP14555 144 aa8.25□□□□□ -1.09
CDH3-203ENST00000542274 UNQ9165/PRO28630Q6UXU0 137 aa8.25□□□□□ -1.09
CDH3-203ENST00000542274 F8W735 103 aaPredicted RBP8.25□□□□□ -1.09
CDH3-203ENST00000542274 TRIAP1O43715 76 aa8.25□□□□□ -1.09
CDH3-203ENST00000542274 IGHG2P01859 326 aa8.25□□□□□ -1.09
CDH3-203ENST00000542274 EGR2P11161 476 aaPredicted RBP8.25□□□□□ -1.09
CDH3-203ENST00000542274 MRPS36P82909 103 aaKnown RBP8.25□□□□□ -1.09
CDH3-203ENST00000542274 CFHR3Q02985 330 aa8.25□□□□□ -1.09
CDH3-203ENST00000542274 TMEM263Q8WUH6 116 aaKnown RBP8.25□□□□□ -1.09
CDH3-203ENST00000542274 RNF5Q99942 180 aa8.25□□□□□ -1.09
CDH3-203ENST00000542274 IGHV7-81A0A0B4J1V7 117 aa8.24□□□□□ -1.09
CDH3-203ENST00000542274 A0A0J9YY99 117 aa8.24□□□□□ -1.09
CDH3-203ENST00000542274 XCL1P47992 114 aa8.24□□□□□ -1.09
CDH3-203ENST00000542274 MRPL51Q4U2R6 128 aaKnown RBP8.24□□□□□ -1.09
CDH3-203ENST00000542274 BRD3OSQ6XYD6 125 aa8.24□□□□□ -1.09
CDH3-203ENST00000542274 Q8N6K4 173 aa8.24□□□□□ -1.09
CDH3-203ENST00000542274 XCL2Q9UBD3 114 aa8.24□□□□□ -1.09
CDH3-203ENST00000542274 SLC25A29Q8N8R3 303 aa8.24□□□□□ -1.09
CDH3-203ENST00000542274 Q8N9W7 124 aa8.24□□□□□ -1.09
CDH3-203ENST00000542274 TLN2Q9Y4G6 2542 aa8.24□□□□□ -1.09
CDH3-203ENST00000542274 CKS2P33552 79 aa8.23□□□□□ -1.09
CDH3-203ENST00000542274 ECSCRQ19T08 205 aa8.23□□□□□ -1.09
CDH3-203ENST00000542274 ZNF491Q8N8L2 437 aa8.23□□□□□ -1.09
CDH3-203ENST00000542274 LAMTOR3Q9UHA4 124 aa8.23□□□□□ -1.09
CDH3-203ENST00000542274 IGLV11-55A0A075B6I3 123 aa8.23□□□□□ -1.09
CDH3-203ENST00000542274 G3V318 75 aa8.23□□□□□ -1.09
CDH3-203ENST00000542274 DAD1P61803 113 aa8.23□□□□□ -1.09
CDH3-203ENST00000542274 Q6ZS46 218 aa8.23□□□□□ -1.09
CDH3-203ENST00000542274 KLHL30-AS1Q8NEE0 82 aa8.23□□□□□ -1.09
CDH3-203ENST00000542274 CREBBPQ92793 2442 aa8.23□□□□□ -1.09
CDH3-203ENST00000542274 ITPR2Q14571 2701 aa8.23□□□□□ -1.09
CDH3-203ENST00000542274 PRRC2AP48634 2157 aaKnown RBP8.23□□□□□ -1.09
CDH3-203ENST00000542274 TRBV30A0A0K0K1B3 111 aa8.23□□□□□ -1.09
CDH3-203ENST00000542274 RBMY1BA6NDE4 496 aaKnown RBP8.23□□□□□ -1.09
CDH3-203ENST00000542274 RBMY1EA6NEQ0 496 aaKnown RBP8.23□□□□□ -1.09
CDH3-203ENST00000542274 RBMY1DP0C7P1 496 aaKnown RBP8.23□□□□□ -1.09
CDH3-203ENST00000542274 RBMY1A1P0DJD3 496 aaKnown RBP8.23□□□□□ -1.09
CDH3-203ENST00000542274 RBMY1CP0DJD4 496 aa8.23□□□□□ -1.09
CDH3-203ENST00000542274 RBMY1FQ15415 496 aaKnown RBP8.23□□□□□ -1.09
CDH3-203ENST00000542274 TM2D3Q9BRN9 247 aa8.23□□□□□ -1.09
CDH3-203ENST00000542274 J3QKU1 62 aa8.22□□□□□ -1.09
CDH3-203ENST00000542274 M0R3E3 92 aa8.22□□□□□ -1.09
CDH3-203ENST00000542274 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.22□□□□□ -1.09
CDH3-203ENST00000542274 IGKV3D-7A0A0C4DH55 119 aa8.22□□□□□ -1.09
CDH3-203ENST00000542274 F8VRH5 84 aa8.22□□□□□ -1.09
CDH3-203ENST00000542274 ATP6V0E1O15342 81 aa8.22□□□□□ -1.09
CDH3-203ENST00000542274 BUB3O43684 328 aa8.22□□□□□ -1.09
CDH3-203ENST00000542274 INAFM2P0DMQ5 153 aa8.22□□□□□ -1.09
CDH3-203ENST00000542274 IGFL4Q6B9Z1 124 aa8.22□□□□□ -1.09
CDH3-203ENST00000542274 SOSTDC1Q6X4U4 206 aa8.22□□□□□ -1.09
CDH3-203ENST00000542274 TIMM21Q9BVV7 248 aa8.22□□□□□ -1.09
CDH3-203ENST00000542274 HECTD1Q9ULT8 2610 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms