RNA–Protein interactions for RNA: ENST00000542180.5

SUPT20H-224, Transcript of SPT20 homolog, SAGA complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SUPT20H, Length 2,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-224ENST00000542180 EPM2AB3EWF7 344 aa5.32□□□□□ -1.56
SUPT20H-224ENST00000542180 HOXD3P31249 432 aaPredicted RBP5.32□□□□□ -1.56
SUPT20H-224ENST00000542180 C9orf129Q5T035 196 aaKnown RBP5.32□□□□□ -1.56
SUPT20H-224ENST00000542180 FP248Q71RG6 208 aaPredicted RBP5.32□□□□□ -1.56
SUPT20H-224ENST00000542180 VSIG2Q96IQ7 327 aa5.32□□□□□ -1.56
SUPT20H-224ENST00000542180 UBE2D4Q9Y2X8 147 aa5.32□□□□□ -1.56
SUPT20H-224ENST00000542180 PRRC2AP48634 2157 aaKnown RBP5.31□□□□□ -1.56
SUPT20H-224ENST00000542180 CACNA1EQ15878 2313 aa5.31□□□□□ -1.56
SUPT20H-224ENST00000542180 TRBV12-3P01733 135 aa5.31□□□□□ -1.56
SUPT20H-224ENST00000542180 IGHG2P01859 326 aa5.31□□□□□ -1.56
SUPT20H-224ENST00000542180 CD28P10747 220 aa5.31□□□□□ -1.56
SUPT20H-224ENST00000542180 XCL1P47992 114 aa5.31□□□□□ -1.56
SUPT20H-224ENST00000542180 WFDC9Q8NEX5 89 aa5.31□□□□□ -1.56
SUPT20H-224ENST00000542180 XCL2Q9UBD3 114 aa5.31□□□□□ -1.56
SUPT20H-224ENST00000542180 SMG1Q96Q15 3661 aaKnown RBP5.31□□□□□ -1.56
SUPT20H-224ENST00000542180 DMXL2Q8TDJ6 3036 aa5.31□□□□□ -1.56
SUPT20H-224ENST00000542180 SPENQ96T58 3664 aaKnown RBP5.31□□□□□ -1.56
SUPT20H-224ENST00000542180 TMEM178BH3BS89 294 aa5.31□□□□□ -1.56
SUPT20H-224ENST00000542180 RPL28P46779 137 aaKnown RBP5.31□□□□□ -1.56
SUPT20H-224ENST00000542180 C20orf203Q8NBC4 194 aa5.31□□□□□ -1.56
SUPT20H-224ENST00000542180 C20orf173Q96LM9 149 aa5.31□□□□□ -1.56
SUPT20H-224ENST00000542180 RNF5Q99942 180 aa5.31□□□□□ -1.56
SUPT20H-224ENST00000542180 DMDP11532 3685 aa5.3□□□□□ -1.56
SUPT20H-224ENST00000542180 TACC2O95359 2948 aa5.3□□□□□ -1.56
SUPT20H-224ENST00000542180 LINC00308Q8TCZ7 52 aa5.3□□□□□ -1.56
SUPT20H-224ENST00000542180 MRPL53Q96EL3 112 aaKnown RBP5.3□□□□□ -1.56
SUPT20H-224ENST00000542180 ZNF625Q96I27 306 aaPredicted RBP5.3□□□□□ -1.56
SUPT20H-224ENST00000542180 SMIM26A0A096LP01 95 aa5.3□□□□□ -1.56
SUPT20H-224ENST00000542180 KNCNA6PVL3 124 aa5.3□□□□□ -1.56
SUPT20H-224ENST00000542180 MED14OSP0DP75 135 aa5.3□□□□□ -1.56
SUPT20H-224ENST00000542180 MRPS36P82909 103 aaKnown RBP5.3□□□□□ -1.56
SUPT20H-224ENST00000542180 WNK2Q9Y3S1 2297 aa5.29□□□□□ -1.56
SUPT20H-224ENST00000542180 TMEM105Q8N8V8 129 aa5.29□□□□□ -1.56
SUPT20H-224ENST00000542180 LY6G5BQ8NDX9 201 aa5.29□□□□□ -1.56
SUPT20H-224ENST00000542180 RNASE6Q93091 150 aaKnown RBP5.29□□□□□ -1.56
SUPT20H-224ENST00000542180 LINC00474Q9P2X8 69 aa5.29□□□□□ -1.56
SUPT20H-224ENST00000542180 LENEPQ9Y5L5 61 aa5.29□□□□□ -1.56
SUPT20H-224ENST00000542180 CSMD1Q96PZ7 3565 aa5.29□□□□□ -1.56
SUPT20H-224ENST00000542180 TRBV6-5A0A0K0K1A5 114 aa5.29□□□□□ -1.56
SUPT20H-224ENST00000542180 H7BZZ5 65 aa5.29□□□□□ -1.56
SUPT20H-224ENST00000542180 TIMM17BO60830 172 aa5.29□□□□□ -1.56
SUPT20H-224ENST00000542180 C15orf32Q32M92 178 aa5.29□□□□□ -1.56
SUPT20H-224ENST00000542180 LCE2CQ5TA81 110 aa5.29□□□□□ -1.56
SUPT20H-224ENST00000542180 CEP250Q9BV73 2442 aa5.28□□□□□ -1.56
SUPT20H-224ENST00000542180 F6UB75 175 aa5.28□□□□□ -1.56
SUPT20H-224ENST00000542180 LYPD5Q6UWN5 251 aa5.28□□□□□ -1.56
SUPT20H-224ENST00000542180 IL17DQ8TAD2 202 aa5.28□□□□□ -1.56
SUPT20H-224ENST00000542180 MUC4Q99102 2169 aa5.28□□□□□ -1.56
SUPT20H-224ENST00000542180 M0QY20 66 aa5.28□□□□□ -1.56
SUPT20H-224ENST00000542180 GYPEP15421 78 aa5.28□□□□□ -1.56
SUPT20H-224ENST00000542180 ATP1A1-AS1Q5TC04 95 aa5.28□□□□□ -1.56
SUPT20H-224ENST00000542180 CLEC19AQ6UXS0 136 aa5.28□□□□□ -1.56
SUPT20H-224ENST00000542180 FAM19A1Q7Z5A9 133 aa5.28□□□□□ -1.56
SUPT20H-224ENST00000542180 LINC00482Q8N8I6 264 aa5.28□□□□□ -1.56
SUPT20H-224ENST00000542180 ROS1P08922 2347 aa5.27□□□□□ -1.57
SUPT20H-224ENST00000542180 NCR3O14931 201 aa5.27□□□□□ -1.57
SUPT20H-224ENST00000542180 SOSTDC1Q6X4U4 206 aa5.27□□□□□ -1.57
SUPT20H-224ENST00000542180 NPBQ8NG41 125 aa5.27□□□□□ -1.57
SUPT20H-224ENST00000542180 FAM104AQ969W3 186 aa5.27□□□□□ -1.57
SUPT20H-224ENST00000542180 SS18Q15532 418 aa5.26□□□□□ -1.57
SUPT20H-224ENST00000542180 ITLN2Q8WWU7 325 aaPredicted RBP5.26□□□□□ -1.57
SUPT20H-224ENST00000542180 TRIOBPQ9H2D6 2365 aa5.26□□□□□ -1.57
SUPT20H-224ENST00000542180 CCL21O00585 134 aa5.26□□□□□ -1.57
SUPT20H-224ENST00000542180 NDUFA1O15239 70 aa5.26□□□□□ -1.57
SUPT20H-224ENST00000542180 ENHOQ6UWT2 76 aa5.26□□□□□ -1.57
SUPT20H-224ENST00000542180 Q9H8V8 135 aa5.26□□□□□ -1.57
SUPT20H-224ENST00000542180 C19orf73Q9NVV2 129 aa5.26□□□□□ -1.57
SUPT20H-224ENST00000542180 A0A087WYN8 130 aa5.25□□□□□ -1.57
SUPT20H-224ENST00000542180 RBM3P98179 157 aaKnown RBP5.25□□□□□ -1.57
SUPT20H-224ENST00000542180 SNURFQ9Y675 71 aa5.25□□□□□ -1.57
SUPT20H-224ENST00000542180 PATE3B3GLJ2 98 aa5.25□□□□□ -1.57
SUPT20H-224ENST00000542180 SOCS3O14543 225 aa5.25□□□□□ -1.57
SUPT20H-224ENST00000542180 ECSCRQ19T08 205 aa5.25□□□□□ -1.57
SUPT20H-224ENST00000542180 KAAG1Q9UBP8 84 aa5.25□□□□□ -1.57
SUPT20H-224ENST00000542180 CDKN2A-AS1Q9UH64 79 aa5.25□□□□□ -1.57
SUPT20H-224ENST00000542180 TPRP12270 2363 aaKnown RBP5.25□□□□□ -1.57
SUPT20H-224ENST00000542180 IGKV3-7A0A075B6H7 116 aa5.24□□□□□ -1.57
SUPT20H-224ENST00000542180 TRBV7-6A0A0J9YX20 115 aa5.24□□□□□ -1.57
SUPT20H-224ENST00000542180 NBL1P41271 181 aa5.24□□□□□ -1.57
SUPT20H-224ENST00000542180 HIST2H2BCQ6DN03 193 aa5.24□□□□□ -1.57
SUPT20H-224ENST00000542180 HIST2H2BDQ6DRA6 164 aa5.24□□□□□ -1.57
SUPT20H-224ENST00000542180 DPM3Q9P2X0 92 aa5.24□□□□□ -1.57
SUPT20H-224ENST00000542180 POLEQ07864 2286 aa5.24□□□□□ -1.57
SUPT20H-224ENST00000542180 F8WEM9 126 aa5.24□□□□□ -1.57
SUPT20H-224ENST00000542180 CCKP06307 115 aa5.24□□□□□ -1.57
SUPT20H-224ENST00000542180 PIK3CD-AS1Q5SR53 167 aa5.24□□□□□ -1.57
SUPT20H-224ENST00000542180 C11orf44Q8N8P7 122 aa5.24□□□□□ -1.57
SUPT20H-224ENST00000542180 RMI2Q96E14 147 aa5.24□□□□□ -1.57
SUPT20H-224ENST00000542180 OBSCN-AS1Q96MR7 158 aa5.24□□□□□ -1.57
SUPT20H-224ENST00000542180 KLK9Q9UKQ9 250 aa5.24□□□□□ -1.57
SUPT20H-224ENST00000542180 RP1L1Q8IWN7 2480 aaPredicted RBP5.24□□□□□ -1.57
SUPT20H-224ENST00000542180 LCE2AQ5TA79 106 aaPredicted RBP5.23□□□□□ -1.57
SUPT20H-224ENST00000542180 SLPIP03973 132 aa5.23□□□□□ -1.57
SUPT20H-224ENST00000542180 MPLKIPQ8TAP9 179 aa5.23□□□□□ -1.57
SUPT20H-224ENST00000542180 FAM110DQ8TAY7 271 aaPredicted RBP5.23□□□□□ -1.57
SUPT20H-224ENST00000542180 COPS9Q8WXC6 57 aa5.23□□□□□ -1.57
SUPT20H-224ENST00000542180 ABCA4P78363 2273 aa5.23□□□□□ -1.57
SUPT20H-224ENST00000542180 CACNA1GO43497 2377 aa5.22□□□□□ -1.57
SUPT20H-224ENST00000542180 IGHV7-81A0A0B4J1V7 117 aa5.22□□□□□ -1.57
SUPT20H-224ENST00000542180 LYNX1G3V0Z9 82 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms