RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 NKX2-5P52952 324 aaPredicted RBP9.56□□□□□ -0.88
ITM2C-208ENST00000541852 COTL1Q14019 142 aa9.56□□□□□ -0.88
ITM2C-208ENST00000541852 C9orf62Q8N4C0 152 aa9.56□□□□□ -0.88
ITM2C-208ENST00000541852 NTF3P20783 257 aa9.55□□□□□ -0.88
ITM2C-208ENST00000541852 IGLV4-60A0A075B6I1 120 aa9.54□□□□□ -0.88
ITM2C-208ENST00000541852 TAGLN2P37802 199 aaKnown RBP9.54□□□□□ -0.88
ITM2C-208ENST00000541852 LYZL1Q6UWQ5 148 aa9.54□□□□□ -0.88
ITM2C-208ENST00000541852 AMTP48728 403 aa9.53□□□□□ -0.88
ITM2C-208ENST00000541852 SULT1A2P50226 295 aa9.53□□□□□ -0.88
ITM2C-208ENST00000541852 MEF2BQ02080 365 aaPredicted RBP9.53□□□□□ -0.88
ITM2C-208ENST00000541852 PKHD1L1Q86WI1 4243 aa9.53□□□□□ -0.88
ITM2C-208ENST00000541852 RAB19A4D1S5 217 aa9.52□□□□□ -0.89
ITM2C-208ENST00000541852 H7C423 109 aa9.52□□□□□ -0.89
ITM2C-208ENST00000541852 PANO1I0J062 215 aa9.52□□□□□ -0.89
ITM2C-208ENST00000541852 TEX261Q6UWH6 196 aa9.52□□□□□ -0.89
ITM2C-208ENST00000541852 MED9Q9NWA0 146 aa9.52□□□□□ -0.89
ITM2C-208ENST00000541852 A0A087WYN8 130 aa9.51□□□□□ -0.89
ITM2C-208ENST00000541852 NCR2O95944 276 aa9.51□□□□□ -0.89
ITM2C-208ENST00000541852 HNRNPA3P51991 378 aaKnown RBP9.51□□□□□ -0.89
ITM2C-208ENST00000541852 TWIST1Q15672 202 aa9.51□□□□□ -0.89
ITM2C-208ENST00000541852 SMIM15Q7Z3B0 74 aa9.51□□□□□ -0.89
ITM2C-208ENST00000541852 C7orf33Q8WU49 177 aa9.51□□□□□ -0.89
ITM2C-208ENST00000541852 FAM210AQ96ND0 272 aa9.51□□□□□ -0.89
ITM2C-208ENST00000541852 CNFNQ9BYD5 112 aa9.51□□□□□ -0.89
ITM2C-208ENST00000541852 HMCN2Q8NDA2 5059 aa9.51□□□□□ -0.89
ITM2C-208ENST00000541852 SLPIP03973 132 aa9.5□□□□□ -0.89
ITM2C-208ENST00000541852 CTRLP40313 264 aa9.5□□□□□ -0.89
ITM2C-208ENST00000541852 RPS10P46783 165 aaKnown RBP9.5□□□□□ -0.89
ITM2C-208ENST00000541852 NUDT10Q8NFP7 164 aa9.5□□□□□ -0.89
ITM2C-208ENST00000541852 SPACA4Q8TDM5 124 aa9.5□□□□□ -0.89
ITM2C-208ENST00000541852 NUDT11Q96G61 164 aa9.5□□□□□ -0.89
ITM2C-208ENST00000541852 PLAC8Q9NZF1 115 aa9.5□□□□□ -0.89
ITM2C-208ENST00000541852 AMMECR1LQ6DCA0 310 aa9.49□□□□□ -0.89
ITM2C-208ENST00000541852 GFRA4Q9GZZ7 299 aa9.49□□□□□ -0.89
ITM2C-208ENST00000541852 PKIGQ9Y2B9 76 aa9.49□□□□□ -0.89
ITM2C-208ENST00000541852 GAGE12HA6NDE8 117 aa9.48□□□□□ -0.89
ITM2C-208ENST00000541852 NDUFS6O75380 124 aaKnown RBP9.47□□□□□ -0.89
ITM2C-208ENST00000541852 MT1HL1P0DM35 61 aa9.47□□□□□ -0.89
ITM2C-208ENST00000541852 BCL2P10415 239 aa9.47□□□□□ -0.89
ITM2C-208ENST00000541852 GATD1Q8NB37 220 aa9.47□□□□□ -0.89
ITM2C-208ENST00000541852 RPP21Q9H633 154 aaKnown RBP9.47□□□□□ -0.89
ITM2C-208ENST00000541852 LINC00474Q9P2X8 69 aa9.47□□□□□ -0.89
ITM2C-208ENST00000541852 TRBV20OR9-2A0A075B6H5 130 aa9.46□□□□□ -0.9
ITM2C-208ENST00000541852 ZNF25P17030 456 aaPredicted RBP9.46□□□□□ -0.9
ITM2C-208ENST00000541852 COX6A2Q02221 97 aa9.46□□□□□ -0.9
ITM2C-208ENST00000541852 C15orf56Q8N910 161 aa9.46□□□□□ -0.9
ITM2C-208ENST00000541852 APCSP02743 223 aa9.45□□□□□ -0.9
ITM2C-208ENST00000541852 RNASEKQ6P5S7 137 aaKnown RBP9.45□□□□□ -0.9
ITM2C-208ENST00000541852 CHCHD10Q8WYQ3 142 aaPredicted RBP9.45□□□□□ -0.9
ITM2C-208ENST00000541852 CHTF8P0CG12 524 aa9.44□□□□□ -0.9
ITM2C-208ENST00000541852 SLC51BQ86UW2 128 aa9.44□□□□□ -0.9
ITM2C-208ENST00000541852 OCC1Q8TAD7 63 aa9.44□□□□□ -0.9
ITM2C-208ENST00000541852 TMEM101Q96IK0 257 aa9.44□□□□□ -0.9
ITM2C-208ENST00000541852 BTF3L4Q96K17 158 aa9.44□□□□□ -0.9
ITM2C-208ENST00000541852 GVQW2A0A096LPI5 108 aaPredicted RBP9.43□□□□□ -0.9
ITM2C-208ENST00000541852 IGKV3OR2-268A0A0C4DH90 116 aa9.43□□□□□ -0.9
ITM2C-208ENST00000541852 A8MWL6 223 aa9.43□□□□□ -0.9
ITM2C-208ENST00000541852 I3L3M4 83 aa9.43□□□□□ -0.9
ITM2C-208ENST00000541852 PHOX2AO14813 284 aa9.43□□□□□ -0.9
ITM2C-208ENST00000541852 PMCHP20382 165 aa9.43□□□□□ -0.9
ITM2C-208ENST00000541852 MAJINQ3KP22 176 aa9.43□□□□□ -0.9
ITM2C-208ENST00000541852 OR5A1Q8NGJ0 315 aa9.43□□□□□ -0.9
ITM2C-208ENST00000541852 GTSF1Q8WW33 167 aa9.43□□□□□ -0.9
ITM2C-208ENST00000541852 RNASE7Q9H1E1 156 aaKnown RBP9.43□□□□□ -0.9
ITM2C-208ENST00000541852 UBR4Q5T4S7 5183 aa9.43□□□□□ -0.9
ITM2C-208ENST00000541852 SDHAF1A6NFY7 115 aa9.42□□□□□ -0.9
ITM2C-208ENST00000541852 FGF6P10767 208 aa9.42□□□□□ -0.9
ITM2C-208ENST00000541852 Q6ZNX1 250 aa9.42□□□□□ -0.9
ITM2C-208ENST00000541852 STPG4Q8N801 248 aa9.42□□□□□ -0.9
ITM2C-208ENST00000541852 TRAV26-2A0A0B4J265 109 aa9.41□□□□□ -0.9
ITM2C-208ENST00000541852 TRBV6-5A0A0K0K1A5 114 aa9.41□□□□□ -0.9
ITM2C-208ENST00000541852 FOXA3P55318 350 aaPredicted RBP9.41□□□□□ -0.9
ITM2C-208ENST00000541852 HIGD2BQ4VC39 106 aa9.41□□□□□ -0.9
ITM2C-208ENST00000541852 PRSS3P2Q8NHM4 247 aa9.41□□□□□ -0.9
ITM2C-208ENST00000541852 IGHV1-58A0A0C4DH39 117 aa9.4□□□□□ -0.9
ITM2C-208ENST00000541852 TMEM250H0YL14 139 aa9.4□□□□□ -0.9
ITM2C-208ENST00000541852 GATCO43716 136 aaKnown RBP9.4□□□□□ -0.9
ITM2C-208ENST00000541852 FOXI1Q12951 378 aa9.4□□□□□ -0.9
ITM2C-208ENST00000541852 FAM231DQ6ZW35 169 aa9.4□□□□□ -0.9
ITM2C-208ENST00000541852 BORCS7Q96B45 105 aa9.4□□□□□ -0.9
ITM2C-208ENST00000541852 RPL39LQ96EH5 51 aaKnown RBP9.4□□□□□ -0.9
ITM2C-208ENST00000541852 LINC01600Q96MT4 127 aa9.4□□□□□ -0.9
ITM2C-208ENST00000541852 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.39□□□□□ -0.91
ITM2C-208ENST00000541852 IGKV2-24A0A0C4DH68 120 aa9.39□□□□□ -0.91
ITM2C-208ENST00000541852 IGKV2-29A2NJV5 120 aaPredicted RBP9.39□□□□□ -0.91
ITM2C-208ENST00000541852 K7EN84 100 aa9.39□□□□□ -0.91
ITM2C-208ENST00000541852 SS18Q15532 418 aa9.39□□□□□ -0.91
ITM2C-208ENST00000541852 CT83Q5H943 113 aa9.39□□□□□ -0.91
ITM2C-208ENST00000541852 TCTE3Q8IZS6 198 aa9.39□□□□□ -0.91
ITM2C-208ENST00000541852 LINC00959A0A1B0GUT2 108 aa9.38□□□□□ -0.91
ITM2C-208ENST00000541852 CCL25O15444 150 aa9.38□□□□□ -0.91
ITM2C-208ENST00000541852 SMAGPQ0VAQ4 97 aa9.38□□□□□ -0.91
ITM2C-208ENST00000541852 MRAP2Q96G30 205 aa9.38□□□□□ -0.91
ITM2C-208ENST00000541852 ST20Q9HBF5 79 aa9.38□□□□□ -0.91
ITM2C-208ENST00000541852 FAM231BA6NCW3 169 aa9.37□□□□□ -0.91
ITM2C-208ENST00000541852 ESDP10768 282 aa9.37□□□□□ -0.91
ITM2C-208ENST00000541852 XCL1P47992 114 aa9.37□□□□□ -0.91
ITM2C-208ENST00000541852 BLOC1S1P78537 153 aa9.37□□□□□ -0.91
ITM2C-208ENST00000541852 PRR3P79522 188 aaKnown RBP9.37□□□□□ -0.91
ITM2C-208ENST00000541852 REG3GQ6UW15 175 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms