RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 IGHV4-31P0DP07 118 aa9.94□□□□□ -0.82
PTPN1-202ENST00000541713 VWFP04275 2813 aa9.94□□□□□ -0.82
PTPN1-202ENST00000541713 PPP1R17O96001 155 aa9.94□□□□□ -0.82
PTPN1-202ENST00000541713 I3L3M4 83 aa9.93□□□□□ -0.82
PTPN1-202ENST00000541713 MUSTN1Q8IVN3 82 aa9.93□□□□□ -0.82
PTPN1-202ENST00000541713 TRAV13-1A0A0B4J241 112 aa9.92□□□□□ -0.82
PTPN1-202ENST00000541713 PRSS47A8MTI9 375 aa9.92□□□□□ -0.82
PTPN1-202ENST00000541713 KLK9Q2XQG4 91 aa9.92□□□□□ -0.82
PTPN1-202ENST00000541713 C20orf203Q8NBC4 194 aa9.92□□□□□ -0.82
PTPN1-202ENST00000541713 SPANXB1Q9NS25 103 aaPredicted RBP9.92□□□□□ -0.82
PTPN1-202ENST00000541713 TMEM238LA0A1B0GVL6 79 aa9.92□□□□□ -0.82
PTPN1-202ENST00000541713 A6NJY4 79 aa9.92□□□□□ -0.82
PTPN1-202ENST00000541713 CFC1BP0CG36 223 aa9.92□□□□□ -0.82
PTPN1-202ENST00000541713 CFC1P0CG37 223 aa9.92□□□□□ -0.82
PTPN1-202ENST00000541713 C9orf85Q96MD7 179 aa9.92□□□□□ -0.82
PTPN1-202ENST00000541713 IGLV4-3A0A075B6K6 122 aa9.91□□□□□ -0.82
PTPN1-202ENST00000541713 H3BMM0 161 aa9.91□□□□□ -0.82
PTPN1-202ENST00000541713 TRBV27A0A0K0K1C4 114 aa9.91□□□□□ -0.82
PTPN1-202ENST00000541713 TCL1BO95988 128 aa9.91□□□□□ -0.82
PTPN1-202ENST00000541713 UNC79Q9P2D8 2635 aa9.91□□□□□ -0.82
PTPN1-202ENST00000541713 LINC01619G3V211 115 aa9.91□□□□□ -0.82
PTPN1-202ENST00000541713 ZNF22P17026 224 aaPredicted RBP9.91□□□□□ -0.82
PTPN1-202ENST00000541713 ATP6V0BQ99437 205 aa9.91□□□□□ -0.82
PTPN1-202ENST00000541713 NDUFA11Q86Y39 141 aa9.9□□□□□ -0.82
PTPN1-202ENST00000541713 LGALS9O00182 355 aa9.9□□□□□ -0.82
PTPN1-202ENST00000541713 NSUN5P1Q3KNT7 163 aa9.9□□□□□ -0.82
PTPN1-202ENST00000541713 SAMD13Q5VXD3 122 aa9.9□□□□□ -0.82
PTPN1-202ENST00000541713 Q6YL49 198 aa9.9□□□□□ -0.82
PTPN1-202ENST00000541713 Q6ZUT4 128 aa9.9□□□□□ -0.82
PTPN1-202ENST00000541713 TRGV11A0A075B6L2 103 aa9.9□□□□□ -0.83
PTPN1-202ENST00000541713 GAGE12HA6NDE8 117 aa9.9□□□□□ -0.83
PTPN1-202ENST00000541713 C9JAW5 83 aa9.9□□□□□ -0.83
PTPN1-202ENST00000541713 CIDEAO60543 219 aa9.9□□□□□ -0.83
PTPN1-202ENST00000541713 LINC00467Q9BRT7 94 aa9.9□□□□□ -0.83
PTPN1-202ENST00000541713 GEMIN7Q9H840 131 aaKnown RBP9.9□□□□□ -0.83
PTPN1-202ENST00000541713 GAGE12JA6NER3 117 aa9.89□□□□□ -0.83
PTPN1-202ENST00000541713 GAGE4Q13068 117 aa9.89□□□□□ -0.83
PTPN1-202ENST00000541713 GAGE5Q13069 117 aa9.89□□□□□ -0.83
PTPN1-202ENST00000541713 TIMM21Q9BVV7 248 aa9.89□□□□□ -0.83
PTPN1-202ENST00000541713 RHODO00212 210 aa9.89□□□□□ -0.83
PTPN1-202ENST00000541713 MAP6D1Q9H9H5 199 aa9.89□□□□□ -0.83
PTPN1-202ENST00000541713 ELANEP08246 267 aa9.88□□□□□ -0.83
PTPN1-202ENST00000541713 STHQ8IWL8 128 aa9.88□□□□□ -0.83
PTPN1-202ENST00000541713 IGHV3-30-3P0DP02 117 aa9.88□□□□□ -0.83
PTPN1-202ENST00000541713 TMEM141Q96I45 108 aa9.88□□□□□ -0.83
PTPN1-202ENST00000541713 TMEM238C9JI98 176 aa9.88□□□□□ -0.83
PTPN1-202ENST00000541713 MED14OSP0DP75 135 aa9.88□□□□□ -0.83
PTPN1-202ENST00000541713 C10orf126Q8N4M7 172 aa9.88□□□□□ -0.83
PTPN1-202ENST00000541713 F8W1H4 67 aa9.87□□□□□ -0.83
PTPN1-202ENST00000541713 GATA3P23771 443 aa9.87□□□□□ -0.83
PTPN1-202ENST00000541713 TAL2Q16559 108 aa9.87□□□□□ -0.83
PTPN1-202ENST00000541713 IGHV3-30P01768 117 aa9.87□□□□□ -0.83
PTPN1-202ENST00000541713 IGHV3-30-5P0DP03 117 aa9.87□□□□□ -0.83
PTPN1-202ENST00000541713 SMCPP49901 116 aaPredicted RBP9.87□□□□□ -0.83
PTPN1-202ENST00000541713 NFE4Q86UQ8 179 aa9.87□□□□□ -0.83
PTPN1-202ENST00000541713 TIMM17AQ99595 171 aa9.87□□□□□ -0.83
PTPN1-202ENST00000541713 J3QR89 54 aa9.87□□□□□ -0.83
PTPN1-202ENST00000541713 EIF4EBP3O60516 100 aaPredicted RBP9.87□□□□□ -0.83
PTPN1-202ENST00000541713 Q6ZTI0 123 aa9.87□□□□□ -0.83
PTPN1-202ENST00000541713 SIGMAR1Q99720 223 aa9.87□□□□□ -0.83
PTPN1-202ENST00000541713 PRO1854Q9UHT4 67 aa9.87□□□□□ -0.83
PTPN1-202ENST00000541713 DEFB113Q30KQ7 82 aa9.86□□□□□ -0.83
PTPN1-202ENST00000541713 ADAMTSL4-AS1Q5T5F5 129 aa9.86□□□□□ -0.83
PTPN1-202ENST00000541713 NOP10Q9NPE3 64 aaKnown RBP9.86□□□□□ -0.83
PTPN1-202ENST00000541713 TEP1Q99973 2627 aaKnown RBP9.86□□□□□ -0.83
PTPN1-202ENST00000541713 NXPH4O95158 308 aa9.86□□□□□ -0.83
PTPN1-202ENST00000541713 ZNF843Q8N446 348 aa9.86□□□□□ -0.83
PTPN1-202ENST00000541713 CITED2Q99967 270 aaPredicted RBP9.86□□□□□ -0.83
PTPN1-202ENST00000541713 NDUFA12Q9UI09 145 aa9.86□□□□□ -0.83
PTPN1-202ENST00000541713 DSCR9P59020 149 aa9.86□□□□□ -0.83
PTPN1-202ENST00000541713 C11orf68Q9H3H3 251 aaKnown RBP9.86□□□□□ -0.83
PTPN1-202ENST00000541713 TOMM7Q9P0U1 55 aa9.86□□□□□ -0.83
PTPN1-202ENST00000541713 CDKN2A-AS1Q9UH64 79 aa9.86□□□□□ -0.83
PTPN1-202ENST00000541713 GAGE7O76087 117 aa9.85□□□□□ -0.83
PTPN1-202ENST00000541713 GAGE12FP0CL80 117 aa9.85□□□□□ -0.83
PTPN1-202ENST00000541713 GAGE12GP0CL81 117 aa9.85□□□□□ -0.83
PTPN1-202ENST00000541713 GAGE12IP0CL82 117 aa9.85□□□□□ -0.83
PTPN1-202ENST00000541713 PAPPA-AS1Q5QFB9 102 aa9.85□□□□□ -0.83
PTPN1-202ENST00000541713 CFAP126Q5VTH2 177 aa9.85□□□□□ -0.83
PTPN1-202ENST00000541713 SLC25A29Q8N8R3 303 aa9.85□□□□□ -0.83
PTPN1-202ENST00000541713 SMR3AQ99954 134 aa9.85□□□□□ -0.83
PTPN1-202ENST00000541713 YAE1D1Q9NRH1 226 aa9.85□□□□□ -0.83
PTPN1-202ENST00000541713 ERG28Q9UKR5 140 aa9.85□□□□□ -0.83
PTPN1-202ENST00000541713 A0A096LPF7 62 aa9.85□□□□□ -0.83
PTPN1-202ENST00000541713 LOC100131303A0A0U1RQF7 123 aa9.85□□□□□ -0.83
PTPN1-202ENST00000541713 M0R2P5 195 aa9.85□□□□□ -0.83
PTPN1-202ENST00000541713 TMEM223A0PJW6 202 aa9.84□□□□□ -0.83
PTPN1-202ENST00000541713 A0A096LNT2 108 aa9.84□□□□□ -0.83
PTPN1-202ENST00000541713 LINC00694P0DN24 101 aa9.84□□□□□ -0.83
PTPN1-202ENST00000541713 ZNF415Q09FC8 603 aa9.84□□□□□ -0.83
PTPN1-202ENST00000541713 PEMTQ9UBM1 199 aa9.84□□□□□ -0.83
PTPN1-202ENST00000541713 TRGV2A0A075B6R0 118 aa9.84□□□□□ -0.83
PTPN1-202ENST00000541713 DEFB114Q30KQ6 69 aa9.84□□□□□ -0.83
PTPN1-202ENST00000541713 A0A0J9YXY3 114 aa9.83□□□□□ -0.84
PTPN1-202ENST00000541713 A0A1B0GV72 72 aa9.83□□□□□ -0.84
PTPN1-202ENST00000541713 CR1P17927 2039 aa9.83□□□□□ -0.84
PTPN1-202ENST00000541713 UBE2D1P51668 147 aa9.83□□□□□ -0.84
PTPN1-202ENST00000541713 CLEC2BQ92478 149 aa9.83□□□□□ -0.84
PTPN1-202ENST00000541713 TENM1Q9UKZ4 2725 aa9.82□□□□□ -0.84
PTPN1-202ENST00000541713 ODF3L2Q3SX64 289 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms